Labeo rohita (rohu): 127163798
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Entry
127163798 CDS
T09007
Symbol
cacna2d1a
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1a isoform X1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04260
Cardiac muscle contraction
lroh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127163798 (cacna2d1a)
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
127163798 (cacna2d1a)
04261 Adrenergic signaling in cardiomyocytes
127163798 (cacna2d1a)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127163798 (cacna2d1a)
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127163798 (cacna2d1a)
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
VWA_3
VWA_2
dCache_1
MCP-like_PDC_1
Motif
Other DBs
NCBI-GeneID:
127163798
NCBI-ProteinID:
XP_050963169
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All DBs
Position
4:30009897..30116902
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AA seq
1107 aa
AA seq
DB search
MSLRRIMDALRLSAALLLLLSLLSSGSAIQFPDSQLTRKWAMQMQEELVQLIDAEAGMQK
LQKIFQQFQRHYVVKQNNATQLVAKAAHEIENLLANRSEALKVLATAAEKLQEEHQWKNE
TVVNDTVYYNAKDKFDINDTETYHNRIKLEFKEDPVFKRPVSYNTTAVHIPTDIYEGSTI
ILNELNWTAALDTVFKKNKEKDPTLLWQVFGSATGLARYFPASPWVDTRNTPNKIDLYDV
RRRPWYIQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNIVSFNNSA
KSVACFENLVQANVRNKKILKEAVQKITANGTTDYKIGFKEAFDQLSSMNVSRANCNKII
MLFTDGGEDTASEIFQEYNREKKVRIFTFSVGQHNYDKTPIQWMACNNKGYYYEIPSIGA
IRINTQEYLDVLGRPMVKEDNKAKTVQWTNVYVDALELGLVITGTLPVFNKTNTKNSQDK
KNQSQLILGVMAIDVSLDDIKRLTPHYTLGPNGYYFAIDPNGYVLLHPNLQPKDLKSQEP
VTLDFLDAELEDEVKVEIRRSMIDGQKDQKRFQTLMKSQDERYIDRGMRTYTWGPVNATD
YSLALVLPDYSVSYIKATIADTITQARFAESLQVDKFEEYGYTLIAPRDYCTDLKAQSDN
ITQFLIDFNEYIDTKTPNNQLCNMELINRLLLDAGITAELAKYWNEQGLNERIKAKFVVT
DGGVTRVYPASAGSEWTEEAETYKSSFYKRSLDNDVYVVTSAPYANNVTQDSVLVSRAMD
LRVDEFSLKPAVVGVKLDIQTWMESFINATVTPKCVGEICGCRRDDVNLDCFLLDDGGFL
VMTNKYPYIDKIGQFFGMIEPSLMRNLINETLFAVNITYDYQALCEPTKESKAAAGLRSV
YVPTIADILNIGWWASAAAWSILQQLMVSITFPNFLEAADLDDDLSEIPSKESCIKEQKQ
YFFENSETTFKGTVDYQNCSRQFIAEKLPKTNLVLIVADTQMCSQTDEKCFSQEEKPSPG
PDPCKIAQNPRYRKGPTQCFDNNARDEAMCRRNAGSPLVSSLLMLLLPVFMCCLGSVHLS
ICLFLSLFINLLTYLYQSIYHVCQIRS
NT seq
3324 nt
NT seq
+upstream
nt +downstream
nt
atgtcactcagaagaataatggatgcgctcagattgtccgctgctcttcttctacttctg
tctttactcagctctggaagcgctatacagtttcccgactcccagctgacccggaaatgg
gcgatgcagatgcaggaggagctagtgcagttgatcgatgctgaggcgggtatgcaaaag
ctccaaaaaattttccagcaatttcagagacactatgttgtgaagcaaaacaacgctaca
cagctggtggcaaaagctgcacatgaaatcgaaaaccttcttgccaaccgttccgaagct
ctaaaggtgctggcgacggctgcggagaaactgcaggaggagcaccagtggaagaatgaa
actgttgtgaatgacaccgtctactacaatgccaaggacaagtttgacattaatgacacg
gaaacataccacaaccgcatcaaactagaattcaaagaggatcctgttttcaaacgcccc
gtttcgtacaacacaacagcagtgcacattcccacagatatctacgagggctccactata
atcctgaatgagctaaactggactgccgctctggataccgtcttcaagaagaacaaggaa
aaagacccgaccctcctctggcaggtttttggcagtgcgacaggcctggctcgatacttc
ccagcttccccttgggttgacacgaggaacacaccaaacaagattgacctgtatgatgta
cgccgaaggccctggtatatccaaggtgcagcttcacctaaagacatgttgatcctggtg
gacgcgagtggaagtgtgtcaggtctgacactgaagctcattcgcacttcggtcagtgag
atgctagagactctctccgacgatgattacgtcaacatcgtctcattcaacaattcagcc
aagtcagtcgcctgctttgaaaacctggtccaagcaaatgtccgcaataagaagattctc
aaggaggcggtacaaaagatcacagcaaatggcaccactgactacaaaatcggctttaag
gaggcttttgaccagctctcttcaatgaatgtttcaagagcaaactgtaataagatcatc
atgctgttcactgacggaggggaagacacagcttcagagatctttcaagagtacaaccgt
gagaagaaggttcgaatcttcaccttttctgtgggccagcataactacgataagacgcca
attcaatggatggcttgcaataacaaaggttattattatgagatcccatctattggagcc
atcaggatcaacacccaggagtacctggatgtgctgggtagacccatggtgaaagaagat
aataaagcaaaaactgtgcagtggaccaacgtttacgtcgacgctcttgaactgggcctt
gtgattacaggcactctgccagtgtttaataagaccaacacaaagaacagtcaagacaag
aagaaccagagccagttgattttgggggtgatggccatagacgtgtctctggacgacatc
aagagactgactccacattacactctcggaccaaatggatactacttcgccatcgatccc
aacggctacgtgctacttcatcccaaccttcagccaaaggatctcaagtctcaggaaccc
gtgacgttggacttcttggatgcagaactagaggatgaagtgaaagtggagatcagaaga
agtatgatagacggtcagaaggatcaaaagagatttcaaacactaatgaaatctcaagat
gagcgttatatagacagaggcatgagaacctacacttggggcccagtcaatgccacagac
tacagtcttgctttagttctacctgattacagtgtcagctacatcaaggccactatagca
gacaccatcactcaggccagatttgctgaaagtctgcaggtggacaaatttgaagagtat
ggatatactttaatagcacccagagattactgcacagaccttaaagctcagagtgacaac
atcacacaattcctcatcgacttcaatgaatacattgacacaaagacgcccaacaaccag
ctgtgtaacatggagctaataaacagactgctgctggacgccggcatcactgctgaactg
gccaaatactggaacgaacagggactgaatgagagaatcaaggctaagtttgtggtgact
gacggcggtgtcactagagtttatcctgcgagtgctggttcagaatggactgaagaggca
gaaacatacaagtctagtttctacaagagaagtctggacaatgatgtttacgtagttaca
tcagcaccatacgcaaacaatgtaactcaagattcagttttagtgagcagagcaatggac
ctgagagttgatgaattcagcctaaaaccagcagtggttggagtaaaactggatatacag
acttggatggaaagcttcattaacgctacagttacacctaaatgtgttggtgaaatctgt
ggttgcaggagggacgatgtcaatctggactgctttcttctggacgatggtggcttcctt
gtcatgaccaataagtacccctatatcgataagatcggacagtttttcggtatgattgaa
cccagcctaatgagaaatctgataaacgaaaccctgttcgcagtcaacataacctacgac
taccaggcactctgtgaacccaccaaagaaagtaaagcagccgctggtctcagatcagtc
tatgtgcccaccatagctgacatcctgaacatcggttggtgggcttccgcagcagcctgg
tcaatattgcagcagttgatggtcagcatcacatttcctaatttccttgaggcagcggat
ctagatgatgacctgtctgaaataccatctaaagagagttgcattaaagagcagaaacag
tatttctttgagaacagcgagacaacttttaaggggactgttgattatcagaactgctcc
aggcagttcatagctgaaaagcttccgaagacaaatctggtgcttattgttgcagacacg
caaatgtgtagccagactgatgagaaatgtttttcccaggaagaaaagccttctccaggt
ccagatccctgcaagatagcccagaacccgcgctatcggaaaggtccgacgcagtgcttt
gacaacaacgcacgtgatgaggccatgtgtaggagaaatgcaggctctccactggtctcc
tctctgctcatgttactgctgccagtgttcatgtgctgtctcgggtcagtccatctctct
atctgcctctttctctctctttttattaatttacttacttatttatatcaatctatctat
catgtctgccaaattcgaagttaa
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