Labeo rohita (rohu): 127164720
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Entry
127164720 CDS
T09007
Symbol
nthl1
Name
(RefSeq) endonuclease III-like protein 1 isoform X1
KO
K10773
endonuclease III [EC:3.2.2.-
4.2.99.18
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
127164720 (nthl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lroh03400
]
127164720 (nthl1)
Enzymes [BR:
lroh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
127164720 (nthl1)
DNA repair and recombination proteins [BR:
lroh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
127164720 (nthl1)
Prokaryotic type
127164720 (nthl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
RecR_HhH
Motif
Other DBs
NCBI-GeneID:
127164720
NCBI-ProteinID:
XP_050964746
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Position
1:14884961..14889357
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AA seq
456 aa
AA seq
DB search
MLAPVRNLCVCMFNRLSVRMNSPYFNDSIAVKDTSATETMGKSTVNKGGIRRLRSRMAQG
LKSEDDSPKVKVEVQEQSISDAPLHKHAETDAETVSGFNNTTTKVKEAAVHDQAPLTSPR
KPRRGRVKVEYEDEEGAGLQLKRERWEPRDWRTQLSFIREMRSKRDAPVDQMGAEKCYDT
EAPPEVRRYQVLISLMLSSQTKDHVTAGAMQRLRERELSVDAVLKMDDETLGKLIYPVGF
WRTKVKYIKQATALIQQEFGGDIPDTLEGLMRLPGVGPKMAHLAMDIAWNRVSGIGVDTH
VHRISNRLGWTKKETKTPEETRRALEEWLPRNLWSEINWLLVGFGQQVCLPVAPLCSMCL
NQHTCPSAHRSSPNKKLKSSPAKPTSNSPDHKLTSPTTQIKKEPADTSLSQRRKNTVKQE
VQLTSEEDTPSLLKKRNSRKGRAGAQQDTPLSSHRT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgttggcgccagtccggaatttatgtgtttgtatgttcaaccgtttgagtgtaagaatg
aactctccgtatttcaacgattcaatagctgtaaaagacacttctgcaactgaaactatg
gggaaaagtactgtaaataaaggaggaattcgcagattgagatccagaatggctcaaggg
ctcaaatcagaagatgattctccaaaagtgaaagtagaggttcaggagcaaagtatttca
gatgctccactgcataaacatgcagaaactgatgcagagactgtgtcaggtttcaataac
acaaccacaaaagtgaaagaagcagcagtgcatgatcaagcccctttgacctcacctaga
aaaccaaggcgggggcgtgtgaaggtggagtatgaggacgaggaaggggcggggctacag
ctaaagagggagcgctgggagccgcgtgattggagaacccagctgtcattcatcagggag
atgaggagcaaacgggacgctcccgtggaccaaatgggagcggagaaatgctacgacacc
gaggccccgcctgaggtgcgtcgttaccaggtgctgatctccttaatgctgtccagtcaa
accaaagatcacgtgacggctggtgctatgcagagattacgcgagcgtgagctcagtgtg
gacgccgtactcaagatggacgatgagacgttggggaaactcatctacccagtaggcttc
tggaggacaaaggtgaagtacatcaaacaggccacagctctgatacagcaggagttcggc
ggagacattcctgacacactggagggtctgatgcgtctgccgggcgtcggcccaaagatg
gcccacctggccatggacattgcctggaatcgggtgtcaggcattggtgtggacacccac
gttcaccgaatctcaaacagactcggatggaccaaaaaggagaccaagacgcccgaggag
acacgtagagctctcgaggagtggttgccacgaaatctatggagtgagatcaactggttg
ctggttggtttcggccagcaggtgtgtttacctgttgctccgctctgctccatgtgtctg
aatcagcacacctgtccctccgcccaccgatcgtctcccaacaagaagctcaaatccagc
ccagcaaaacccaccagtaacagtccggatcacaaactaacatctccaacaacacagatc
aaaaaagagccggcagacacttccctgtctcagaggaggaagaacacagttaaacaggaa
gtccagctgacatcagaagaagacactccatctctcctcaaaaagagaaacagcaggaaa
gggagagcaggagcacaacaggacacacctttgtcttcacacaggacataa
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