Labeo rohita (rohu): 127165370 Help Entry 127165370         CDS       T09007                                  Symbol traf2a Name (RefSeq) TNF receptor-associated factor 2   KO K03173   TNF receptor-associated factor 2 [EC:2.3.2.27] Organism lroh  Labeo rohita (rohu) Pathway lroh04010   MAPK signaling pathway lroh04137   Mitophagy - animal lroh04141   Protein processing in endoplasmic reticulum lroh04210   Apoptosis lroh04217   Necroptosis lroh04621   NOD-like receptor signaling pathway lroh04622   RIG-I-like receptor signaling pathway lroh04920   Adipocytokine signaling pathway lroh05132   Salmonella infection lroh05168   Herpes simplex virus 1 infection Brite KEGG Orthology (KO) [BR:lroh00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04141 Protein processing in endoplasmic reticulum     127165370 (traf2a)  09130 Environmental Information Processing   09132 Signal transduction    04010 MAPK signaling pathway     127165370 (traf2a)  09140 Cellular Processes   09141 Transport and catabolism    04137 Mitophagy - animal     127165370 (traf2a)   09143 Cell growth and death    04210 Apoptosis     127165370 (traf2a)    04217 Necroptosis     127165370 (traf2a)  09150 Organismal Systems   09151 Immune system    04621 NOD-like receptor signaling pathway     127165370 (traf2a)    04622 RIG-I-like receptor signaling pathway     127165370 (traf2a)   09152 Endocrine system    04920 Adipocytokine signaling pathway     127165370 (traf2a)  09160 Human Diseases   09172 Infectious disease: viral    05168 Herpes simplex virus 1 infection     127165370 (traf2a)   09171 Infectious disease: bacterial    05132 Salmonella infection     127165370 (traf2a)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:lroh03019]     127165370 (traf2a)    04121 Ubiquitin system [BR:lroh04121]     127165370 (traf2a) Enzymes [BR:lroh01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      127165370 (traf2a) Messenger RNA biogenesis [BR:lroh03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     Stress granule specific factors      127165370 (traf2a) Ubiquitin system [BR:lroh04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    TRAF proteins     127165370 (traf2a) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  TRAF-mep_MATH MATH_2 TRAF_BIRC3_bd zf-TRAF TRAF2_zf zf-C3HC4 TRAF3_RING zf-C3HC4_2 zf-C3HC4_4 zf-RING_5 Sina_ZnF zf-C3HC4_3 zf-RING_UBOX zf-RING_4 DEC-1_N zf-RING_2 ATG16 zf-ACC zf-RING_6 zf-TRAF_2 MATH DASH_Dad3 Motif Other DBs NCBI-GeneID:  127165370 NCBI-ProteinID:  XP_050965906 LinkDB All DBs Position 5:29354934..29366068 Genome browser AA seq 574 aa AA seqDB search MAAQEPSPPSSLEGNKPGFPKKILANKLEDKHLCNICLKILRRPFQAQCGHRFCSYCFNK AVSSGPQKCSACIKEDIFEEPTSILKQGCAFPDNAAKREVEALEAVCINEECSWTGTIKE YEANHEGKCDFRILPCPSCKELLRANELERHNERECPERTLNCKYCKEPFHFKNIKAHDE ICPKYPMICEGCAKKKIPREKYVDHIKLCTKFRTPCRFHVVGCDMTVEKEKIHDHEQACS YEHLNLLLHFIMGIKVNLESLQPQSLELASHKIHELHQSLRELEVKMGQLSGAGAPVQGA CAPLPPPPAPTLGTSFTPLPTAVGAALELQLHSEKTKVAELSRRCQELELKVSTFENIVC VLNREMERSATTMEAYNRQHRLDQDKIEILNNKVRQLERTVGLRDLSIVEMEAKMREMSA ATYDGVFVWKISDFSKKRQDAVAGRAPAMFSPAFYTSKYGYKMCLRIYLNGDGTGRGTHL SLFFVVMRGHSDALLKWPFNQKVTLMLLDQNNREHIIDAFRPDISSSSFQRPVSDMNIAS GCPLFCPLSKLDSKNSYIRDDTIFIKAIVDLTGL NT seq 1725 nt NT seq  +upstreamnt  +downstreamnt atggctgcacaggaaccctcaccaccatcttcattagaaggcaacaaacctggcttcccc aagaaaatactcgccaacaagctggaggataagcatctgtgcaatatctgtctgaaaatc cttaggagaccgtttcaggcgcagtgcggacatcgtttctgttcttattgttttaataaa gcagtgagctccggaccacagaaatgcagtgcctgtataaaggaggatatatttgaagaa ccaacatcaattttgaaacagggctgtgcttttcctgataatgctgccaaaagagaagtt gaagctcttgaagctgtttgcatcaatgaggaatgcagctggacaggcaccatcaaagaa tatgaggcaaaccatgagggaaagtgtgacttcaggatccttccctgcccgtcatgcaaa gagcttctaagagccaacgaacttgaacgtcacaatgagagagaatgcccagaaaggact cttaattgtaaatactgcaaggagccatttcattttaaaaacattaaggcccatgatgag atatgccctaaataccctatgatttgtgaaggttgtgccaagaaaaaaattcccagagag aaatatgtggaccacattaaactgtgcaccaaattcagaacaccttgcagatttcacgtt gtaggctgtgatatgacggtggaaaaggaaaagatccatgaccatgagcaagcctgttcc tacgaacacttaaacctcctattgcacttcatcatgggcatcaaggtgaacttggagagt ctgcagcctcagagtctggaactggccagccataagatccacgagctgcatcagtctctg cgggagctggaggtgaagatgggccagctgagtggagcaggggctcccgtgcagggggcc tgtgcgccgctgccaccgccgccggctccgacgctgggtacatctttcaccccactccct acagccgttggggcggccttagagctgcagctacacagcgagaagaccaaagtggcggag ctcagtcgtcgctgtcaggagctggagctgaaggtaagcacctttgagaacattgtctgc gtgctcaaccgtgagatggagcgctccgccaccaccatggaggcctataaccgtcagcac cggcttgaccaggacaagattgagatacttaacaacaaggtacggcagttggagaggaca gtaggccttagggatctctccatcgtggagatggaggcaaagatgagggagatgtccgct gccacttatgatggcgtatttgtatggaagatctctgacttctcaaagaagagacaagat gctgtagccggacgagcacctgcaatgttctcgcctgctttttacacaagcaaatatggc tataagatgtgtttgcgcatctatctgaatggtgatgggacgggacgtggtactcacttg tctctgttcttcgtggtgatgaggggacacagtgatgccttgcttaagtggcctttcaat caaaaggtcaccctcatgttgctggatcagaacaacagggagcacatcatcgatgccttc cggccagacatttcctcttcctccttccagaggcctgtgagtgacatgaacattgccagc ggctgccctctcttctgccctctctccaaactagactccaagaactcctacatccgagac gacaccatcttcatcaaggccatcgttgacctcacgggcctttaa

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