Labeo rohita (rohu): 127167274
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Entry
127167274 CDS
T09007
Symbol
pkp1b
Name
(RefSeq) plakophilin-1
KO
K10387
plakophilin 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
lroh04812
]
127167274 (pkp1b)
Cytoskeleton proteins [BR:
lroh04812
]
Eukaryotic cytoskeleton proteins
Intermediate filaments
Intermediate filament-binding proteins
127167274 (pkp1b)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Arm
HEAT_EZ
HEAT
ELMO_ARM
Arm_2
Thioredoxin_13
Motif
Other DBs
NCBI-GeneID:
127167274
NCBI-ProteinID:
XP_050969161
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All DBs
Position
6:32880937..32897353
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AA seq
732 aa
AA seq
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MMPEPLKSALSIGDVEDTSLALPSDRELRSAQQRVLEQVHTIKRSKSKYSSKSVSGLTSP
TSPESDSVFYDFKFSPGASLSGPSFSRGGTMTNGATQRQGYVRQSTHSRSSSGQRVASGS
GKLDRYFYSTTRTLPAQTRSSNQLYNYQATRSAPDLGYQSTSNGGAATLRTQTSRQTFSR
VQNPQPPQGLGNGTRVSNSNQVSTMRPVRRPSSLQSNGESRYSMVRSGQAKDVSGMNAER
LMADMTMQDAVEYLYSLDETHQLCGAAYIQHSTFTDDKAKKEVQALKGIPPLVGLLSSPS
SQVQETVAAALRNVVFKNQANKEEVHRNEGITQAVQLLGASNTETQKHLTGLLWNLSSAD
NLKLDLLRIALPVLNEKVIGPFTASTDDNSNTTLEPEIFYNATACLRNLSASKLANRQAM
RNCKGLIDALMRYTENCVNNGMPDDKSLENCVCILHNLTYQLETEMPSLFNKLNVLASST
RNRASASDVGPIGCFSSQSQKLQQESGFDFPVMEDNNPKGAGWLFHSKALQMYLNLLSSS
EKDATLEASCGALQNLTANDGIVSNVLSHTIVQKLNGLKYISPLLQSPNAALQNSAVALL
GNLSRSARTNKTMARQTLPQLVGFLNSGLTKGDTSPEYDSKMASALHSAHTMMKVDPDIT
KSLLNNSLINSLNNLSLNQSGLPKSSTAAGVLLHSLWSEKNIQSFLKKQGLSKKSFVNDI
TSAAFKSLQVVD
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgatgcccgaacctttaaaatcggctctgtccatcggcgacgtggaggacacgtctctc
gctcttccgtccgaccgagagctgagatccgcgcagcagcgagttctggagcaggttcac
accatcaagaggagcaagtccaaatacagcagcaagagcgtgtccggactcacttctccc
accagccctgaaagtgacagcgtgttttacgacttcaagttttctccaggcgcgtctctc
agcggaccctcgttcagcagaggaggaaccatgacaaatggggctacgcaaaggcaaggt
tatgtgcgccagtccacccactcccgcagctccagcggtcagcgggtggccagcggctca
ggcaagttagatcgctacttctacagcactaccaggaccctccctgcccaaacccggagc
agtaaccaactgtacaactaccaagccacccgcagcgctccagacctgggctaccagtcc
acctccaacggcggcgccgccactctacgcacccaaaccagccgacagaccttcagcagg
gtgcagaaccctcaacctccccagggtctcggtaacggcaccagagtgtctaacagcaat
caggtcagcaccatgcggcccgtcagacgcccgtcttccctgcagtccaacggagagtcc
aggtattccatggtcaggagcggacaggccaaggatgtctctgggatgaacgcagagagg
ctcatggccgatatgacgatgcaagatgcggtcgaatatctgtacagccttgatgagacc
caccagctgtgtggagccgcttacatccagcacagcaccttcaccgatgacaaggccaag
aaagaggtgcaggccctgaagggaattcctcctctggtcggcctgttaagcagtccaagt
tctcaggtccaggagacggtggctgccgccctgaggaacgtggtcttcaaaaaccaggcc
aacaaagaagaagtgcaccgcaacgaaggaatcacacaggctgtgcagctgctcggcgct
tccaacactgagacacagaaacacctgacaggtctcctgtggaacctctcctccgcggat
aaccttaagctagatctgctccgcatcgccctgcccgtgctcaacgagaaagtcataggg
ccttttacagcaagcacagatgataactccaacaccaccctggaaccagagattttctac
aatgccacggcgtgcctacgcaacttaagcgcctccaaactggcgaaccgacaagccatg
cgcaactgcaaaggcctcattgatgcgctcatgcgctacacagagaactgcgtcaataac
gggatgcctgacgacaagtctttggagaactgcgtctgcattctgcacaacctcacctac
cagctggagacagagatgccgtctctcttcaataaattaaacgtactggccagtagcact
cgcaatcgcgccagtgcatcggatgtcggtcctataggctgcttcagctcccagagccaa
aaactgcagcaggagagcggctttgactttccagtgatggaggacaacaatcctaagggt
gccggctggctcttccactccaaagccctgcagatgtacctcaatctgttgagctccagc
gaaaaagatgccacacttgaggccagctgtggagcactgcagaacctcacagccaatgat
ggcatagtatcgaacgtgttgagtcatacaatcgtccagaagctcaacggtcttaaatac
atcagtccgttgttgcagtcgcccaatgctgctctacagaacagcgcagtcgctctgctc
gggaatctgtccagatccgcacgtacaaacaaaaccatggctcgtcagactctcccgcag
ctggtcggtttcctgaactcggggctcacgaagggcgacacctcgcccgaatacgacagc
aaaatggcgtcagctctccacagcgcacacaccatgatgaaggtcgaccctgatatcacc
aagagtctgctcaacaacagcctgattaactccctcaacaacctgagtctcaatcaatcg
ggtctgccaaagtccagcactgcagcaggggttcttcttcacagtctgtggtcggaaaag
aatattcagagtttccttaaaaagcaaggcttgagtaagaagtcctttgtgaatgacata
acgtcggcagctttcaaatctcttcaggtggtcgactaa
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