Labeo rohita (rohu): 127167455
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Entry
127167455 CDS
T09007
Symbol
casp20
Name
(RefSeq) caspase 20, apoptosis-related cysteine peptidase
KO
K04398
caspase 8 [EC:
3.4.22.61
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04115
p53 signaling pathway
lroh04210
Apoptosis
lroh04217
Necroptosis
lroh04620
Toll-like receptor signaling pathway
lroh04621
NOD-like receptor signaling pathway
lroh04622
RIG-I-like receptor signaling pathway
lroh04623
Cytosolic DNA-sensing pathway
lroh04625
C-type lectin receptor signaling pathway
lroh05132
Salmonella infection
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127167455 (casp20)
04217 Necroptosis
127167455 (casp20)
04115 p53 signaling pathway
127167455 (casp20)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127167455 (casp20)
04621 NOD-like receptor signaling pathway
127167455 (casp20)
04622 RIG-I-like receptor signaling pathway
127167455 (casp20)
04623 Cytosolic DNA-sensing pathway
127167455 (casp20)
04625 C-type lectin receptor signaling pathway
127167455 (casp20)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127167455 (casp20)
09171 Infectious disease: bacterial
05132 Salmonella infection
127167455 (casp20)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127167455 (casp20)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.22 Cysteine endopeptidases
3.4.22.61 caspase-8
127167455 (casp20)
Peptidases and inhibitors [BR:
lroh01002
]
Cysteine peptidases
Family C14: caspase family
127167455 (casp20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C14
CARD
Atypical_Card
CUB
Motif
Other DBs
NCBI-GeneID:
127167455
NCBI-ProteinID:
XP_050969498
LinkDB
All DBs
Position
6:complement(9345830..9349533)
Genome browser
AA seq
350 aa
AA seq
DB search
MNKKGSIDVIVKNKVFLIQTLSGEANFILQHVHQAEIITTRDYENLSDIYEREKKVIHLI
DKVMRRGEETCRRFLELLRQDNILETFPDLKGHAVIASPAMPHTSPVQEVCEYKIEKIPR
GKCVIINNVDFQTMAERKGSDKDKEYLAKVFRWLRFEVVEHRNKTAAEMSKLLEDLGKTV
DGDCFVCCILSHGEKEGVCGTDGAVVSVNKIREPFTGINCQRLVDKPKLFIIQACRGKKN
QQRVHVQMDGPEDSEMEVDGEEFDSTIPSDTDFLIARSTTDDHYSYREPEKGSWFIQSLC
QNLEQHCPKGADIQTILLSVNNEVSSRGFNSKQMPIHEVALRKKLVLRPV
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgaacaaaaaaggatcaattgacgtaattgtcaaaaataaagttttcctcattcaaact
ttatctggagaggccaatttcatcttgcagcatgtgcaccaggctgaaattattacaaca
cgtgactacgagaacctctcagatatttatgaaagagagaagaaagtcatccacctaatt
gacaaagtcatgaggaggggggaggaaacttgtcgtcgattcctagagcttttaagacag
gataatatattggaaacttttccagacttaaaaggtcatgctgttattgcttctccagcc
atgccacacacctctccagtgcaggaggtctgtgaatacaaaatagaaaaaattccacgt
ggtaaatgcgtaatcatcaataatgttgattttcagaccatggctgaaagaaagggatcg
gataaggacaaagagtatcttgccaaagttttccgctggttaaggtttgaggtggtggag
cacagaaataaaactgcagctgagatgagcaaacttctcgaggacttggggaagacagta
gatggagactgttttgtatgctgcatcctctctcatggcgaaaaagaaggagtctgtgga
accgatggtgctgttgtttctgttaataaaatacgggagcctttcactggcattaactgc
cagaggctagttgacaagccgaagctgtttattatacaggcatgtcgtgggaaaaaaaat
caacaacgtgtgcatgtgcaaatggatggtccagaagattcagagatggaggtggatggt
gaagagtttgatagcacaatcccatctgacacggatttccttattgccaggtcaaccact
gatgatcactattcttatagagagccagaaaaaggttcctggtttattcagtcactttgc
caaaacctagagcaacattgtccaaaaggtgcagacatccagacaatcttgctttctgtg
aataatgaggttagcagtcggggattcaactccaaacagatgcccatccatgaagtcgcc
ttgaggaagaagctggtcctgcgtccggtgtga
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