Labeo rohita (rohu): 127167677
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Entry
127167677 CDS
T09007
Symbol
adamts18
Name
(RefSeq) A disintegrin and metalloproteinase with thrombospondin motifs 18 isoform X1
KO
K08632
a disintegrin and metalloproteinase with thrombospondin motifs 18 [EC:3.4.24.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127167677 (adamts18)
Peptidases and inhibitors [BR:
lroh01002
]
Metallo peptidases
Family M12: astacin/adamalysin family
127167677 (adamts18)
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Gene cluster
GFIT
Motif
Pfam:
TSP1_ADAMTS
ADAMTS_spacer1
Reprolysin
TSP_1
Pep_M12B_propep
ADAMTS_CR_2
TSP1_spondin
PLAC
Reprolysin_5
ADAMTS_CR_3
Reprolysin_2
TSP1_CCN
Reprolysin_3
Reprolysin_4
Motif
Other DBs
NCBI-GeneID:
127167677
NCBI-ProteinID:
XP_050969810
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Position
7:complement(23131216..23196040)
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AA seq
1229 aa
AA seq
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MHDNMDCLFLLLWSLQVPLALQFCCFHSVTSVSFTGDSGVLYQDYDFATPVEVDSLGSYI
SHDLSRHGRSRRSLSEAGGPVHYHVSAFGKELHLDLQPSHVLAEGFTVQTLGATGINTAT
LDPSIHNCLYQGSIRNHSESSVAISTCTGLSGLIRFSGEELLITPLPQHLALQHNYSAPS
GHHPHVIYKRSAERRVHADKTDWTSSVKSNNPYENHHHHHHHHRHHDYQHGKLQRQHFCG
RRKQYTPKPPTEDHFVMPDEFEQQSRVKRSEITSSKEGGLNVETLVVADRKMLEKHGRDN
VTTYVLTVMNMVSSLFKDGTIGNDINIVVVSLLLLEKDPLGLSINHHADQSLNSFCQWQS
GLIGKNGKRHDHAILLTGLDICSWKNEPCDTLGFAPISGMCSKYRSCTINEDTGLGLAFT
IAHESGHNFGMIHDGEGNPCRKTEGNIMSPTLAGNNGVFSWSACSRQYLNRFLGTAQASC
LVDEPKQIGQYKYPEQLPGQLYDADIQCKWQFGSKAKLCSLDFVKDICKSLWCHRTGHRC
ETKFMPAAEGTICGPDMWCRRGQCVKFGDHGPRAVHGQWSSWSEWSDCSRTCGGGVMHRE
RSCNSPSPQHNGKFCQGPGRLHQLCNTKPCQPNGVDFRAQQCAEYNSKPFRGWYYKWKPY
TKVEEEDICKLYCIAEDFDFFFAMSSKVKDGTSCSDYKGGVCIDGICELVGCDQVLGSKA
ALDACGVCKGDNSTCKFYSGQYTLQHRANEYYPVVMVPAGARSIRVQEMEISTSYLAVRS
LKRGTYYLTGDWTVDWPGRFQFAGTTFNYQRSFNQPETLYAAGPTNETLLFEILLQGKNP
GISWEYTLPHPEKKHNYTWSVVRSDCSAPCAGGRVSTKAICLQDQNTQVNSSLCNPETRP
VVGSHLCNTQPCPAYWTTGKWGVCSRTCGGGQQTRNIRCMRKVTYQREEVAAHSLCPVMA
PAQLQPCNTQACPPEWSTGSWSPCSKTCGRGLKKRSVFCRSTDPGARAVVVPDSMCKLHL
KPKAQETCVLSRCPKNERLQWITTTWGECSASCGAGVRKRELQCGEKDSHGGYTEFPVRR
CRNLLKPQADLEQACNNGPCPEPLPPQILQPGPDRGGASVTLGWYSSPWLQCTVSCGGGV
QTRSVQCLRQGRPSVGCLPHQRPISSRACNTHFCPGPIPVPVPPPSPTLKEDQPCIDFFS
WCHLVPQHGVCNHKFYGQQCCKSCSAKRQ
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgcatgacaacatggattgccttttccttttgctctggagtttacaagtccctctggct
ctgcagttttgttgcttccactctgtaacatcagtctcatttaccggcgacagcggcgtc
ctctatcaagattatgattttgccacaccagtggaagtggactcacttggaagctacatt
tcccatgatttgtcaagacatggaaggagcaggagatccctttcagaagctggtggtcca
gtgcactatcatgtctctgcatttggcaaggaattacacttagacctgcagccgtcccat
gtgctggcagaggggtttactgtacagactctgggtgcaacgggcatcaatacagccacc
cttgacccttctattcataactgtctctatcagggctccatccgaaaccactctgaatcc
tctgtggctatatccacttgcacaggtctgtcaggtctgatccggttctccggcgaggaa
cttctcatcactcctctaccgcagcatttggctttacaacacaactacagcgccccctct
ggacatcatccacatgtcatctacaagcgatcagctgagcgcagagtgcacgctgataag
actgactggaccagcagtgttaaatcaaacaacccctatgagaaccatcaccatcatcac
caccaccatcgtcatcatgactaccagcacggaaagctccagagacaacatttctgcgga
cgccgcaagcaatatactcccaagcctcctacagaggatcattttgtcatgcctgatgag
tttgagcagcaaagccgggtgaagcgctcagagattacatcgagcaaagagggtggtctg
aatgtggaaactctggtggtggcagacaggaagatgctggagaaacatggcagagacaac
gtcactacctacgtccttactgtcatgaacatggtctccagtctgttcaaagatggaact
attggaaatgatatcaacattgttgttgtcagcctcctcctacttgagaaagatccgctg
ggtctgtctatcaaccatcacgcagaccaatcactcaacagcttctgccagtggcaatca
ggcctgataggtaaaaacggcaagcggcacgaccatgccattctgttgacggggctggac
atctgctcctggaagaatgaaccgtgtgacaccttgggtttcgctccaataagtgggatg
tgtagcaaatatcgtagctgcacgattaatgaagatacggggctgggcctcgctttcacc
atcgcccacgagtcaggacataattttggaatgatccatgacggagaggggaatccctgc
cggaagactgaagggaacattatgtctcccacattggctgggaataatggtgttttctcc
tggtctgcctgtagtcggcaatacttgaaccgatttttaggaacagctcaggcttcgtgt
ttagtggacgagcccaagcagataggccagtacaagtatcccgagcagcttccaggtcag
ctgtatgatgctgatatacagtgcaaatggcagtttggctcgaaagcaaaactgtgcagc
ctggactttgtaaaggacatctgtaaatcattgtggtgccacagaacaggacaccggtgt
gagaccaagttcatgcctgctgccgagggcaccatctgcggaccagacatgtggtgcagg
agaggacagtgtgtcaaatttggtgatcatggtcctagagcagtgcatggccagtggtca
agctggtccgagtggtctgactgttcacgcacctgtggtggaggagtcatgcaccgagag
cgatcctgcaacagccccagcccacagcacaacggcaagttctgccaaggccccggtcga
ctgcaccagctgtgtaacaccaagccatgccagcccaacggagtggacttcagagctcag
cagtgcgccgagtacaacagcaaacccttcaggggatggtactacaaatggaagccatac
accaaagtggaagaagaggacatctgtaagctgtactgcattgctgaggactttgatttt
ttcttcgctatgtccagcaaagtcaaagatgggacgtcttgctctgactacaaaggaggg
gtgtgcattgatgggatatgtgagctggtgggctgtgaccaggtgttgggatcaaaggcc
gctttggatgcctgtggagtgtgtaaaggagacaactccacctgcaagttctacagtggc
cagtacaccctccagcacagagccaacgagtactaccccgtcgtgatggttcccgctgga
gcgaggagcatcagggtgcaggagatggagatctccaccagctacctggccgtccgcagc
ctgaagcgtggcacctattacctgacgggggattggacggtggactggcctggcaggttc
cagttcgcaggcactacgttcaactatcagcgctctttcaaccagcctgagaccttgtac
gccgcaggccccactaatgagaccctgctctttgaaattcttcttcagggtaaaaatcct
ggtatatcatgggaatacactctaccccatcctgagaagaagcacaactatacctggtct
gtggtacgctctgactgctctgcgccttgtgctgggggtcgggtctcgacaaaagccatt
tgtttgcaggatcagaacacacaggtcaactcttcactctgcaaccctgagaccagacct
gtggtgggctctcacctgtgcaacacacagccctgccctgcctactggacaacaggtaaa
tggggagtgtgcagtagaacatgtggaggcgggcagcagacgcgaaacatccgctgcatg
aggaaggtgacgtaccagcgggaggaggtggcggctcactccttatgtccagtaatggct
ccggcccagctacagccctgcaacacacaggcgtgtcctccggagtggagcaccggctcc
tggtcaccgtgctccaaaacctgtgggcgaggtttgaagaagcgcagtgttttctgcagg
agcactgatccaggtgccagggctgtggtggtgcctgacagcatgtgtaaattacacctg
aagcccaaagcccaggagacctgtgtgctgagccgctgcccgaagaatgagcgtcttcag
tggataactaccacctggggagagtgttctgcctcctgtggagcaggagtaaggaaaaga
gagctgcagtgtggggagaaagactcccacggaggctacacagagttccctgtgaggagg
tgcaggaacctactcaagccccaagcagacctcgagcaagcttgtaataacggcccctgc
ccagagcccctgcctccccagatcctccaacctggcccagacaggggtggcgcttccgtg
actctgggctggtactcctctccttggcttcaatgcacagtgtcctgtggcggtggggtg
cagacacgtagcgttcagtgtctgagacaagggcgtccgtcggtgggctgtttacctcat
cagagacccatcagctcacgggcctgcaatacacatttctgtcctggtccaatcccagtc
cctgtcccacctccctcacctacacttaaagaagaccagccttgcatcgacttcttcagc
tggtgtcatctggtgcctcagcatggtgtttgcaatcacaaattctacggtcaacaatgc
tgcaagtcctgctccgccaaaagacagtaa
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