Labeo rohita (rohu): 127168284
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Entry
127168284 CDS
T09007
Symbol
mmp2
Name
(RefSeq) 72 kDa type IV collagenase
KO
K01398
matrix metalloproteinase-2 (gelatinase A) [EC:
3.4.24.24
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04912
GnRH signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09152 Endocrine system
04912 GnRH signaling pathway
127168284 (mmp2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127168284 (mmp2)
Enzymes [BR:
lroh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.24 gelatinase A
127168284 (mmp2)
Peptidases and inhibitors [BR:
lroh01002
]
Metallo peptidases
Family M10
127168284 (mmp2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
Reprolysin_3
Reprolysin_5
DUF4953
Motif
Other DBs
NCBI-GeneID:
127168284
NCBI-ProteinID:
XP_050970970
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All DBs
Position
7:28039261..28058799
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AA seq
657 aa
AA seq
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MMCFKFFSCRHVVLKVFLVQFLASLQTYAAPSPIIKFPGDETSFTDKEVALHYLNKFYGC
PKDRCNLMVLKDTLKKMQKFFALPETGEIDQKTVEIMKKPRCGVPDVANYNFFHRKPKWG
QKNVTYRILGHTPDLDEETIDDAFFRAFKVWSDVTPLKFSRIMDGEADIMINFGRNEHGD
GYPFDGKDGLLAHAFAPGPGIGGDSHFDDDELWTLGEGQVVKVKYGNAEGEFCKFPFLFM
GKEYTSCTSQGRDDGFLWCSTTYNFDEDGKYGFCPHELLFTLGGNADGAPCKFPFTFQGE
KYDSCTTSGRDDGYRWCATTEDYDRDKTYGFCPETAMSTVGGNSEGAPCVFPFKFLGNNY
DSCTTSGRSDGKMWCAVTKSFDDDRKWGFCPDQGYSLFLVAAHEFGHALGLEHSEDPGAL
MAPIYTFTKTLRLSNDDVKGIQELYGVPTDKPLPTELPPVTPMDVCNENIIFDAVAQIRG
EIFFFKDRFLFRTADVRRKPTGPMLVATFWSELPEKIDAAYENPLEEKTVFFAGDEMWVY
SASTLEREYPKKISSMGLPSDLHGIDAAYSFHKSKKTYLFAGDKFWRYNEAKKKMDPGFP
KLIADSWSAIPDDLDAALSLNSDGHSYFFKDSHYFKMDDSTLKIVKVGEIKKDWLRC
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgatgtgctttaagtttttcagctgtaggcatgttgtcctcaaagttttcctcgtgcag
tttcttgcttccctgcaaacttatgctgcgccttcacccatcataaagtttccaggcgat
gagacgtctttcacagacaaagaagtggctctgcactacttaaataagttctatggctgc
ccaaaagacaggtgtaatctgatggtgttaaaggacacactgaaaaagatgcagaagttt
tttgctttacctgagacaggggagattgaccagaagacagtagagatcatgaagaaacca
cgatgtggagttcctgatgtggccaattacaatttctttcacaggaagcccaagtgggga
cagaaaaacgttacctacaggatcttagggcacaccccagatctggatgaagaaacgatt
gatgatgctttctttcgtgcatttaaagtctggagtgatgtcacacctctgaaattcagc
aggatcatggatggagaggctgacatcatgattaactttggccgaaatgaacatggtgat
ggttacccatttgatgggaaggatggtcttttggctcatgcctttgctcctggacctgga
attggaggagactctcactttgatgatgatgagttgtggacattaggagagggacaagtg
gtaaaggtgaagtatggtaatgcagagggggagttctgtaagtttccattcttgttcatg
ggtaaagagtacaccagctgcacctctcagggtcgagatgatgggttcctttggtgctct
accacatacaactttgatgaagatggaaaatatggcttctgccctcatgagctcctgttc
acattgggtgggaatgcagatggagctccttgtaagttccccttcacatttcaaggggaa
aaatatgatagttgcaccacctcaggacgggatgatgggtaccgttggtgtgccactacc
gaagattatgaccgtgacaagacttatggattctgtcctgaaacagccatgtcaacggtc
ggaggaaattcagagggtgcaccctgcgtcttcccctttaaatttctgggcaacaattat
gactcctgcaccacttcaggacgcagtgatgggaaaatgtggtgtgccgtcaccaaaagc
tttgatgacgaccgcaagtggggcttctgtcctgaccaaggctacagtctattcctggtg
gcggcccatgagtttggccatgccctgggtttggagcactctgaggaccctggagctctc
atggctcccatctacacattcaccaaaaccttgaggttgtctaatgatgacgttaaaggc
atccaggagctctatggtgtaccaacagacaaaccattgccaactgagctcccgccggtc
acgccgatggatgtatgtaatgaaaacatcatatttgatgctgtagcccagatcagagga
gagatcttcttctttaaggacagattcctcttcaggactgctgatgtcaggaggaagcca
acagggcccatgctggttgctacattctggagtgaacttccagaaaagattgatgcagct
tatgagaatcctctagaggagaagacggtcttctttgcaggtgatgagatgtgggtatat
tctgccagtactctggagagagaatatcccaagaagatctccagcatgggtcttccttca
gatttgcatggaattgatgctgcctactctttccacaagagcaagaagacttacttattt
gctggggacaagttctggagatacaatgaagccaagaaaaagatggatccaggcttccca
aaacttattgcagattcttggagtgctatccccgatgacctagatgctgctctcagtctt
aatagtgacggtcacagctacttcttcaaagactcccactatttcaaaatggatgacagc
actctgaaaattgtcaaagttggagagatcaaaaaggactggctacgttgctga
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