Labeo rohita (rohu): 127168398
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Entry
127168398 CDS
T09007
Symbol
nr1h3
Name
(RefSeq) oxysterols receptor LXR-alpha
KO
K08536
liver X receptor alpha
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh03320
PPAR signaling pathway
lroh04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
127168398 (nr1h3)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
127168398 (nr1h3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127168398 (nr1h3)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127168398 (nr1h3)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127168398 (nr1h3)
Nuclear receptors [BR:
lroh03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
127168398 (nr1h3)
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GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Motif
Other DBs
NCBI-GeneID:
127168398
NCBI-ProteinID:
XP_050971205
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Position
7:28755636..28772215
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AA seq
441 aa
AA seq
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MSTLSATDITDVGHGDSLCCGSEEGPSAATAEVKQETLSQTASYGTSHNELNDTLLMEHG
DIKMYPTEDTPAPEGQPVKRKKGPAPKMLGNEVCSVCGDKASGFHYNVLSCEGCKGFFRR
SVIKGAQYTCKNSGRCEMDMYMRRKCQQCRLRKCREAGMLEQCVLSEEQIRLKKMKKQEE
ETARTSAVAAPSPAPEMPPLAPEQQEMIEKLVAMQKQCNKRSFLDRPKVTPWPQSQDPLN
REVRQQRFAHFTELAIMSVQEIVDFAKQLPGFLELTREDQIALLKTSTIEIMLLETSRRY
NPAIESITFLKDFSYNKEDFAKAGLQFEFINPIFEFSKGMNDLHLDEAEYALLIAINIFS
ADRPNVQDHELVERLQQPYVDALHSYIRIKRPNDHLMFPRMLMKLVSLRTLSSVHSEQVF
ALRLQDKKLPPLLSEIWDVHE
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccctttctgcgactgatatcactgatgttggtcatggggactctctgtgctgt
ggcagtgaagagggcccttcagcagcgacagcagaagtgaaacaggagactctcagtcag
acggcctcatacggcacctcacacaatgagctgaacgacacgctgctcatggagcacggt
gacatcaagatgtaccccacagaggacacacccgcaccagagggtcagccagtaaagaga
aagaaaggccctgctcccaagatgttggggaatgaggtgtgtagcgtatgtggagacaaa
gcatctggctttcattacaacgtgctgagctgtgagggctgtaaaggtttcttcagacgc
agtgtcatcaaaggagctcaatacacctgcaagaattcgggccgctgcgagatggacatg
tacatgcgccgcaagtgtcagcagtgccgtctgcgcaagtgcagggaggcgggcatgcta
gagcaatgtgtgctgtcagaagagcagatccgactgaaaaagatgaaaaaacaggaagaa
gagacggcacgtacctctgcagtggcagcacccagtcctgcccctgagatgccccctctg
gctcctgaacagcaggagatgatcgaaaaactggtggccatgcagaaacagtgcaacaaa
cgctcttttctggaccggcccaaagtcactccttggccacagagtcaggatccacttaac
cgagaggttcgacagcagcggtttgctcatttcactgagctggccatcatgtctgtgcag
gagattgtagactttgcaaaacagctgcctggcttcctggagctcacccgagaggaccag
atcgccctgctgaagacctcaactatagagatcatgctgctagagacttccagacgttat
aacccagcgatagagagcatcaccttcctcaaagacttcagttacaataaagaggatttt
gccaaagcagggctgcagtttgagttcatcaaccccatctttgagttttcaaaaggcatg
aatgacctccacctggatgaagcagagtacgctttgctcatcgctatcaacattttctca
gcagaccgaccgaacgtgcaggatcacgaattagtggaaagactacagcagccatatgtg
gacgctctccactcttacatcagaataaaacgacctaatgatcatctgatgtttccccgg
atgctgatgaagctggttagcctacgcacactgagcagcgtccactcggagcaagtgttt
gctctgcgcctccaagacaagaaactcccacctctgctttcggaaatttgggatgtccac
gagtga
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