KEGG   Labeo rohita (rohu): 127169161
Entry
127169161         CDS       T09007                                 
Name
(RefSeq) HLA class II histocompatibility antigen, DP alpha 1 chain-like
  KO
K06752  MHC class II antigen
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04145  Phagosome
lroh04514  Cell adhesion molecules
lroh04672  Intestinal immune network for IgA production
lroh05168  Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04514 Cell adhesion molecules
    127169161
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    127169161
 09150 Organismal Systems
  09151 Immune system
   04672 Intestinal immune network for IgA production
    127169161
 09160 Human Diseases
  09172 Infectious disease: viral
   05168 Herpes simplex virus 1 infection
    127169161
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:lroh04147]
    127169161
Exosome [BR:lroh04147]
 Exosomal proteins
  Exosomal proteins of haemopoietic cells  (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
   127169161
  Exosomal proteins of epithelial cells
   127169161
  Exosomal proteins of breast milk
   127169161
SSDB
Motif
Pfam: C1-set MHC_II_alpha Ig_2 Ig_3 ig C2-set_2 I-set C2-set_3
Other DBs
NCBI-GeneID: 127169161
NCBI-ProteinID: XP_050972285
LinkDB
Position
8:complement(13664431..13672699)
AA seq 249 aa
MTVRLSSIKMELYITILTLTTVLSTSAKFEHDDLLYAACSDVEEEFYIGYDEEELGHVDF
KQKRAVETLPDFVGPNNISFPRFYEIGADAIVGCKRDLPIFIQTFKSLPLEMDLDAPQTS
IYPKDDVELGVQNTLICHVTGFYPPSVNISWTKNNVIVTEGISISQYRPRTDDTFNIFST
LKFTPDEGDIYSCTVSHKALQGQPQTKIWDVNVALPSVGPAVFCGVGLSLGLMGVILGTF
FLMKGHNCH
NT seq 750 nt   +upstreamnt  +downstreamnt
atgactgttcgactctcatctatcaagatggagctgtacataaccattctcaccctaacc
actgttctctcaactagtgctaaatttgaacatgatgatttgctatatgctgcatgctct
gatgtggaagaagagttttacattggatatgatgaagaggaattggggcatgtcgacttt
aaacagaagagagcagtagagacactacctgattttgtgggaccaaataacatatcattt
cccagattttatgaaatcggtgctgatgcaatagtaggatgcaaacgtgacttaccaata
tttattcaaacattcaagagtctaccactagaaatggatctagatgcaccccagacatcc
atctatccaaaggatgatgtagagctgggtgttcagaacaccctcatctgtcatgtgact
ggcttctaccctccatctgtcaacatctcttggactaagaacaatgttattgtgacagag
ggcataagtataagccagtaccgtccaaggacagatgatacctttaacatcttctccact
cttaagttcacacctgatgaaggagacatttacagctgtactgtgagccacaaagccctc
caaggtcaacctcagaccaaaatatgggatgtaaatgttgctcttccaagtgttggtcca
gcagtgttttgtggagtaggtctgtctcttggtctgatgggagtcattctgggaacgttc
ttcctcatgaaaggacacaactgtcactga

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