Labeo rohita (rohu): 127169888
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Entry
127169888 CDS
T09007
Name
(RefSeq) LOW QUALITY PROTEIN: tight junction protein ZO-2-like
KO
K06098
tight junction protein 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
127169888
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Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
Guanylate_kin
PDZ_2
SH3_2
DUF6288
Motif
Other DBs
NCBI-GeneID:
127169888
NCBI-ProteinID:
XP_050973512
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Position
8:complement(28779202..28886001)
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AA seq
1216 aa
AA seq
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MRLGISGFITDILSTSSNICFCWAEGKSSGMEETVWEQYTVTLQRDSKMGFGIAVSGGRD
NPNVETGETSIIVSDVLPGGPADGLLFENDRVMQVNTIAMDNVPHSFAVQSLRKCGKVAK
ITVKRPRKVAVLKRPPSPSGDSRDYNISSYYPEDNRSVHSDPDSDYPRGNGGLGYPRDRE
HDRSLEKSRIDYLEPDYRSQDYDSRREWSRGRSAERSPSSDSGYRRDGSRGRTLERGSSP
EPRYHRQHSRGRGGGGSPAGSYGRDQGYDTRRYDTRSDDRMIRSHSRDRLQDHSPSPSRE
RERGRDRYNYEPLEPPINVMLVKNRPNEEYGLRLGSQIFIKEMTSTGLAARDGNLQEGDI
ILKINGTVTENLSLSDAGKLIEKSRGKLQLVVQRDHRQILVRIPALADSDSEPDDISEME
SYHSYSPQDDQRSRQSDLSSHSSNDVARENAREDPQSRLAKTPVTSSPYKTPEEPIPAQE
ERVEPQEEEPPPPPPPPPAIKTTPKILLRPSPEDEAIYGPNTVMVSFQKGESVGLRLAGG
NDVGIFIAGVQEGSPAEEEGLCVGDQIMKVNNVDFRGIVREEAVLFLLEIPXGEVVTILA
QNKTEVYEDILVSGRGDSFFIRTHFEYEKELPHCHAFSRGEIFKVVDTLYDGKLGNWLAI
RLGKDNQLLEKGIIPNKSRADQMANVQNTHKGSGSDRADFWRLRGQRAAKKKDVRKSREE
SSAAVSTRFPAYERVVLREAGFRRPVVLFGPIADAASEKLAAELPDEFVIAKTEPKDAGS
EKSSGVVRLNTIRQIIEQDKHALLDVTPKAVDTLNYTQWYPIVIFFSPDSKPGVKAMRQR
IIPSSNRSARKLYDQALKLRKTCSHLFTAVIDLNSANDAWYGSLKETIREQQTHAVWVSE
GKLDGTEGDLDVHDDRMSYLSAMSADYLSMDSRLTSDYDDTADEGGTYTDNETDEPLDRQ
RVSAISRSSEPVMPEEILRKSSPEIRGRIRRVGSREMLTEASPPILSTFLPDPAKVKMLS
QVEVSRGQYDPSRNYDSRSSSPASSEHPRSQDSPAKTKPPPPPTALKPTYASRSSRGLVN
SPPVRDSEPLENSPDDPSHRSFLGKVKAFEQMDHMARTQRVMEIQEAHNARLEIAQKLPD
IYAIPMKSQKLDHSRPQPIGSSARPEPQTPPCKLPYTESRPLGLGEEPGEEFRHQLAEQT
KRGYYNTTQKYQDTEL
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgggaatttcgggcttcattacggatatcctcagcacttccagcaacatctgc
ttctgctgggcggagggaaagagctcaggaatggaggagacggtttgggagcagtacact
gtgactctacagcgggactctaagatgggctttggaattgctgtgtctgggggccgggac
aatccaaacgtggagaccggagagacgtccatcattgtgtcggacgtgctgccaggagga
ccggccgatggactgctctttgagaatgaccgcgtgatgcaggtcaacaccatcgccatg
gataatgtgcctcattcatttgctgtgcagtcacttcggaaatgtgggaaagtggccaaa
ataactgtaaagaggcctcgcaaggtggctgtcctcaagcgcccaccgtccccgagcggg
gatagccgtgattacaacatatccagctattatcccgaggacaaccgcagcgttcacagt
gacccagactctgattaccctcggggaaacggtggcctgggctacccccgtgacagagag
catgaccgcagcctcgagaagagccggatagactacctggagccggattaccgcagccag
gactacgactcccggcgggaatggagcagaggcaggagcgcggagagatcgcccagctct
gacagcggctaccgcagggacggcagccggggccggacgctggagcgtggatccagcccg
gagcctcgctatcacaggcagcacagtagaggccgcggtggaggaggaagccctgccgga
agctacgggagggaccagggctacgacacgcggaggtatgacactcgttcggatgacagg
atgatcaggagtcacagcagggaccggctgcaggatcattcaccttcacccagcagagag
agagaaagaggaagagaccggtataactatgagcccctggagccgcccatcaatgtgatg
ctggtgaaaaacaggcccaatgaagagtacggtctccgactgggcagccagatcttcatc
aaagagatgaccagtactggactggctgccagagatggaaatcttcaagagggcgacatc
attctcaagatcaacgggacggtgaccgagaatctctctctgagcgacgccggcaagctg
attgagaaatcacggggcaaactgcaactggtggtccagcgagaccaccgacagatcctg
gtgcgcattcctgcccttgcagacagcgactcggagcctgacgatatttctgagatggag
tcgtaccattcctactcacctcaagatgaccaaaggtcacgccagtctgacctctcctca
cactcttccaatgacgtagcacgagagaacgccagggaggatcctcaaagcagactggca
aagacccctgttacgtcctctccttacaaaactccagaggagccaattccagcccaggag
gaaagagtagaaccacaggaagaagaaccaccaccaccaccaccaccaccaccagcaata
aagacgacacccaagatcctgctcagaccgagcccagaagacgaggccatttatgggccc
aacacagtgatggtgagctttcagaaaggagagagtgttggcctaaggttggctggagga
aatgatgtgggaatattcatagctggagttcaagagggcagtccggccgaagaagagggt
ctctgtgtcggggatcagatcatgaaggtgaataacgttgactttcgtggcattgtgcga
gaggaggccgtgctgttcctgctggagatcccgnncggggaggtcgtgaccattttggca
cagaataaaactgaggtttatgaagacatcttggtatctggtcgaggggactcatttttc
atccggactcatttcgagtacgagaaggagctgcctcactgtcacgccttctcccgggga
gagatcttcaaggtggtggacaccttatacgacggcaagctgggaaactggctggccatc
cgcttgggcaaagacaaccagctgctggagaagggcatcattcccaacaagagcagagcg
gaccagatggcaaacgtccagaacacacataagggctcaggaagtgacagggccgacttc
tggaggctacgtggtcagagggcagccaagaagaaagatgtgcggaagagccgagaggaa
agttcagcggccgtctccacccgcttccctgcctatgagagagttgtgctgagagaagcg
ggattccgaaggccggttgtgctgtttggaccaatcgctgatgctgccagtgaaaaactg
gctgcggagcttccagacgagtttgtaattgccaaaactgaacccaaagatgcagggtca
gaaaaatcctctggggtggttcgtctcaacactattcggcagatcattgaacaggacaag
catgctctgctggacgtcacccctaaagctgtggacaccctgaattacacacagtggtac
cccatagtcatcttcttcagcccagacagcaaacctggggtgaaggcaatgagacagagg
atcatccccagctctaaccgcagtgcccgcaaactctacgaccaggctctgaagctcagg
aaaacctgctcacacctgtttaccgctgttatcgatctgaactcggctaatgatgcctgg
tacggcagtttgaaggagaccatccgagagcagcagacccacgctgtgtgggtctcggaa
gggaagctggacgggacggagggggaccttgacgttcacgacgaccgcatgtcgtatctc
tcggccatgagcgccgactatctcagcatggacagccggctgaccagcgattacgatgac
acggcggacgagggcgggacttacacagataacgaaacggacgagccgctcgatcgccag
cgggtgtcggccattagccgctcctctgagccagtcatgccagaggagatcctcaggaag
tccagcccagagattcgaggtcgtatccggcgggtgggcagcagagagatgctgacggag
gctagtccccccatactgtccaccttcctgcctgaccctgcaaaggtaaaaatgctgtct
caagtggaggtgtcgcgggggcagtacgacccctctcgaaactacgactctcgttcaagc
agtcccgcgagcagcgagcacccgcgcagccaggactctcctgcaaaaaccaagcccccg
cctccccccacagcactcaaacctacctacgcgtcccgcagctccagaggcctcgtaaac
agccccccagtacgggacagcgaacccctggagaacagtcctgatgatccctctcacagg
tctttcctgggcaaagtgaaggccttcgagcagatggatcacatggcccggacacagaga
gtcatggagatccaagaggcccataacgccaggttggagattgctcagaaacttccagac
atctatgccatccccatgaagtctcagaaactggaccacagcaggccacaacctatcggc
tccagtgcgcgaccagagccccagacgcctccttgcaagctgccatacacggaaagccgc
ccgcttggcctgggcgaggagccaggagaggagtttcggcatcagctggcggagcaaacc
aagcgcggctattacaacaccacacaaaagtatcaggacactgagctgtag
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