KEGG   Labeo rohita (rohu): 127170016
Entry
127170016         CDS       T09007                                 
Symbol
ift122
Name
(RefSeq) intraflagellar transport protein 122 homolog isoform X1
  KO
K19656  intraflagellar transport protein 122
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   03037 Cilium and associated proteins [BR:lroh03037]
    127170016 (ift122)
Cilium and associated proteins [BR:lroh03037]
 Primary cilia and associated proteins
  Intraflagellar transport (IFT) complex A
   127170016 (ift122)
SSDB
Motif
Pfam: Beta-prop_IFT122_1st Beta-prop_IFT122_2nd Zn_ribbon_IFT122 Zn_ribbon_IFT122_C Beta-prop_EML_2 WD40 WD40_WDHD1_1st WD40_Prp19 WD40_CDC20-Fz EIF3I WDR55 ANAPC4_WD40 Beta-prop_RIG_2nd Beta-prop_TEP1_2nd Beta-prop_CAF1B_HIR1 Beta-prop_NUP159_NUP214 NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_EML TPR_IF140-IFT172 TPR_GEMI5 Beta-prop_WDR90_POC16_2nd TPR_IFT80_172 WD40_MABP1-WDR62_2nd Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N Beta-prop_Vps41 WD40_MABP1-WDR62_1st WDR90_beta-prop_4th eIF2A TPR_7 Beta-prop_WDR75_1st ANAPC3 Beta-prop_NWD2_C TPR_2 TPR_COPA_B Beta-prop_SPT8 Beta-prop_IFT140_2nd
Other DBs
NCBI-GeneID: 127170016
NCBI-ProteinID: XP_050973712
LinkDB
Position
8:complement(1911821..1960535)
AA seq 1187 aa
MRAVPTWIDKVHDRDKVEQCIYDLAFRPDGSQLIVAAGNRVLVYDTADGTLIQPLKGHKD
TVYCVAYAKDGKRFASGSADKSIIIWTSKLEGILKYTHNDSIQCVAYNPVTHQLASCSSG
DFGLWSPEQKSVSKHKVSSKITCCGWTNDGQYLALGMMNGVVSIRNKNGEEKVKIERPGG
SSSPIWSIAWNPSKDEHNDILAVADWGQRLSFYQLSGKQIGKDRQLNFDPCCVSFFSKGE
YIVMGGSDKQASLYTKDGVRLGTIGEQSSWVWTCRVKPDSNYVVLGCQDGTIAFFQLIFS
TVHGLYKDRYAYRDSMTDVIVQHLITEQKVRIKCRELVKKIAIYRSRLAIQLPEKILIYE
LHSDDSSDMHYRVKEKICKRFECNLLVVCSQHIILCQEKRLQCLSFTAVKEKEWLMESLI
RYIKVIGGPPGREGLLVGLKNGAILKIFVDNPFAITLLKQNTSVRCLDMSTSRSKLAVVD
EHNTCLVYDIHTKELLFQEPNANSVAWNTQCEDMLCFSGSGYLNIKASNFPVHQQKLQGF
VVGYNGSKIFCLHVYSMAAVEVPQSAPMYQYLERRMFQEAYQIACLGVTDNDWRDLATEA
LEGLDFHTAKKAFIRVRDLRYLELINSIEERKKRGENNNQLFLADVYAYQGKFHEAAKLY
RKTGHDSRALSMYTDLRMFEYAKDFLGSADPKDTKLLMKKQADWAKNSKEPRAAADMYLT
AGEHMKAIEIIGEHGWMDMLIDLARKLDKAEREPLSRCAMFFKKFNHHGYAAEIYNKMGD
LKALVQLHVDARHWDEAFSLVEKHSQFRDDVYVPYAQWLAEHDRFEEAQKAFHKAGRQAE
AVRVLEQLTHNAVVESRFNDASYYYWMLSMQCLDIARDNSEKKDEMLKKFHSFQHLAELY
HVYHSVHRYMSEPFSSNMPEILFNISRFLFHNLTKDVPMGISKVDTLYALAKQSKLLGAY
KVARHAFEKLQGLKIPSRYQDSMELSCLTVRSKPYRDSEDLIPMCYRCSTNNPLLNNQGN
SCINCRQPFIYSASSYEVLPLVEFYLEEDISDEEAVSLIDLEVPRVERNSSWQEMSSGES
QCLRLDDGTEDPEDDPFTAKLSFEQGGRAFVPVVVNRAVLRSMSRRDVLIKRWPKPLSWQ
YYRSLLPDVSITMCPSCFQMFHSEDYELLVLQHNCCPYCRRPIDEPS
NT seq 3564 nt   +upstreamnt  +downstreamnt
atgagggctgttcccacatggatagataaagtacacgaccgggataaggttgagcagtgt
atctatgatctcgccttcagaccggacggctctcagctcatagtcgcggctggaaatcga
gttctggtgtacgacactgctgacggcacgctgattcagccgctcaagggacacaaagac
accgtgtattgtgtggcttatgctaaagatggaaaacgctttgcgtccggttcagcagat
aaaagcatcatcatctggacctccaaactggagggaatcctcaaatacactcacaatgat
tcaatccagtgtgtggcttacaaccccgtcacacaccagctggcctcgtgctcctcggga
gacttcggtctgtggtctccagagcagaagtctgtctccaaacataaagtcagcagtaag
atcacctgctgtgggtggactaatgacggccagtacttggctctgggaatgatgaacgga
gtggtgagcatcagaaataagaatggagaggagaaggtgaagattgagcgtccgggtggc
tcctcatcgcccatctggtccattgcctggaacccgtccaaggatgaacacaatgatatc
ttggcagtagctgattggggacagaggctgtcgttctaccagctcagtgggaaacagatt
gggaaggaccggcagctgaactttgacccgtgctgtgtcagcttcttctctaagggcgag
tacattgtgatgggtggctcggacaaacaggcctcgctctacactaaagacggcgttcgg
ctcggcactatcggcgaacagagctcctgggtttggacctgccgagtcaagccagactcc
aactatgtggttttagggtgtcaggacggcaccatcgccttcttccagctgatcttcagc
acagttcacggattatataaggaccgctacgcctacagagacagtatgaccgacgtcatc
gttcagcacctcatcactgagcaaaaagtacggatcaaatgccgtgagttggtgaagaag
atcgccatctaccgcagcagactggccattcagcttcctgagaagatcctgatctacgag
ctgcactctgacgactcctccgacatgcattaccgtgtcaaagagaagatctgcaagcgc
tttgagtgcaacctgctcgtagtctgctcacagcacatcattctgtgtcaggaaaaaaga
ctgcagtgtttgtccttcacggccgtcaaagagaaggagtggctgatggagtctctcatt
cgctacatcaaagtgatcggtggcccgccgggacgagaagggcttctagtgggactgaaa
aacggagctatcctgaagatcttcgtggacaacccgttcgccatcacgctgctgaagcag
aacacgtcggtgcgctgtctggacatgagcacatcacgcagcaaactcgccgtagtggac
gaacacaacacgtgcctcgtgtacgacattcacacaaaggagctgctcttccaggagccc
aatgcgaacagcgtggcgtggaacacgcagtgtgaggacatgctgtgtttctctggcagt
ggatatctgaacatcaaggccagcaacttcccagtgcaccagcagaaactgcagggcttt
gtggtgggttacaacggatccaagatcttctgccttcacgtctactctatggctgctgtg
gaggtgcctcagtctgctccgatgtatcagtacctggagcggcgcatgtttcaggaggcc
tatcagatcgcctgtctgggtgtgacagataatgactggagggatcttgccacggaggct
ctggagggactcgattttcacaccgccaagaaagcgttcatcagggttcgagatctgcgc
tatctggagctcatcaacagcattgaagagaggaaaaagaggggtgagaataataaccag
ctcttcctggccgatgtttacgcgtatcagggcaagttccacgaggctgccaaactctac
aggaaaaccggccatgacagccgagcgctcagcatgtacacggacctgcgcatgtttgag
tacgccaaggacttcctgggctcagcagaccccaaagacacgaagctgctaatgaagaag
caggcagactgggccaagaacagtaaggagcctcgagcagctgcagacatgtacctgaca
gcaggagaacacatgaaagccatcgagatcatcggagaacacggctggatggacatgttg
atagatttggcccgtaagctggataaagcagagagggagccactgtccaggtgtgccatg
ttctttaagaagttcaatcatcacggctatgctgcagagatttataataaaatgggtgat
ctgaaggcgcttgtgcagcttcatgtggacgccagacactgggatgaggcgttctcttta
gtggagaagcactctcagttcagagatgacgtgtatgtgccgtacgcgcagtggctggct
gaacatgaccgcttcgaggaggcccagaaagccttccacaaagccgggcgtcaggcggag
gccgtgcgagtcctggagcagcttacccataatgccgtggtggagagcaggtttaatgac
gcctcgtactactactggatgctgtccatgcagtgcctcgacattgccagagataattct
gagaagaaagacgagatgctgaagaagtttcacagtttccagcacttggctgagctctat
cacgtctatcattctgtccatcgctacatgtcagagcccttcagttccaacatgccagag
attctcttcaacatctcacgctttctcttccacaacttgaccaaagacgttcctatgggc
atctccaaagtggacacgctgtatgctttggcaaagcagagtaaacttctgggagcgtat
aaagtagcacggcatgccttcgagaagttgcagggcctgaagatcccgtcccgctatcag
gacagcatggagctcagctgcctgacggtccgctccaaaccctaccgcgacagcgaggat
ctgatcccgatgtgttaccgatgctccaccaacaacccgctgctgaacaaccagggaaac
tcctgtatcaactgcagacagccgttcatatattcggcctcctcttacgaggttctcccg
ctggtggagttctatctggaggaggatatctcagacgaggaagccgtgtctctcattgac
ctggaagtgcctcgtgtggagagaaacagcagctggcaggagatgagcagcggcgaatct
cagtgtttgaggctggatgatgggactgaagacccagaggacgacccgttcacagccaaa
ctcagctttgagcagggtggtcgtgcgttcgtgccagtggtggtgaatcgtgccgtcctg
cgctccatgtccagacgagatgtcctgatcaagcgctggcccaagcctctcagctggcag
tactaccgctctctgctgccggacgtcagcatcaccatgtgcccgtcctgctttcagatg
tttcatagtgaggactacgagctgttggttcttcagcacaactgctgtccgtactgccgc
agacccatcgacgagcccagctag

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