Labeo rohita (rohu): 127170207
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Entry
127170207 CDS
T09007
Name
(RefSeq) rano class II histocompatibility antigen, A beta chain-like
KO
K06752
MHC class II antigen
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04145
Phagosome
lroh04514
Cell adhesion molecules
lroh04672
Intestinal immune network for IgA production
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127170207
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127170207
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
127170207
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127170207
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127170207
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127170207
Exosomal proteins of epithelial cells
127170207
Exosomal proteins of breast milk
127170207
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
DUF5562
Motif
Other DBs
NCBI-GeneID:
127170207
NCBI-ProteinID:
XP_050974000
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All DBs
Position
8:complement(13430239..13435003)
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AA seq
265 aa
AA seq
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MLLWPHCNAKMQYNLMAVVLSALFETVHGHYGYVEVQCRVPDSKQHIEFIFSATYNMIEY
LRYNSSESKIVGYTEFGKKLAEDYNKNNILLAQSEFVLNECKRFGEFIVPISGTTVPPDV
VIQLDNVNHKPILVCSAYDFYPKHIRLTWIRDDKVIPADVTSTEEQNNGDWFYQVHSYLE
YFPKPGEKISCVVEHASSNKPMIYHWDPSLPESERSKIILGAVGLSMGVFMAAGGLIYYK
RKQTGFFRLPVCILPMQTVNETEQQ
NT seq
798 nt
NT seq
+upstream
nt +downstream
nt
atgttactgtggccacactgtaatgcaaaaatgcagtacaatctcatggcagtggttttg
tctgctttatttgaaacagtgcatggacattacggatatgttgaagttcaatgtcgagta
cctgactctaaacaacacattgaatttatcttctcggccacctacaacatgattgaatat
ctgagatacaacagtagtgagagcaagattgttggctatactgaatttgggaagaaactg
gcagaggactataataaaaacaatattttacttgcacaatcagaatttgtgctgaacgag
tgcaaaagatttggagagtttattgtccctatttcagggactacagtaccaccagacgtc
gttatccaattggataatgtgaatcataagcctattctggtgtgcagtgcttatgacttc
tatcccaaacacattagactgacatggattagagatgataaagtgattccagctgatgtg
acgtccactgaggagcagaataatggagactggttttatcaggtccactcctacctggaa
tacttccctaaacctggagagaagatctcctgtgtggtggagcacgccagctccaataaa
cccatgatatatcattgggatccttctcttcctgagtctgaaaggtctaaaatcattctt
ggggctgtggggctgtcaatgggggtctttatggcagctggaggcttgatttactacaaa
cgaaaacaaacaggatttttcagacttccagtttgcatacttccaatgcaaacagtgaac
gagactgaacagcagtag
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