KEGG   Labeo rohita (rohu): 127170221
Entry
127170221         CDS       T09007                                 
Symbol
ercc6l2
Name
(RefSeq) DNA excision repair protein ERCC-6-like 2
  KO
K20098  DNA excision repair protein ERCC-6-like 2 [EC:5.6.2.-]
Organism
lroh  Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lroh03400]
    127170221 (ercc6l2)
DNA repair and recombination proteins [BR:lroh03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Helicases
    127170221 (ercc6l2)
SSDB
Motif
Pfam: SNF2-rel_dom Helicase_C RHH_ERCC6L2 ResIII DEAD HDA2-3 VIGSSK ERCC3_RAD25_C
Other DBs
NCBI-GeneID: 127170221
NCBI-ProteinID: XP_050974015
LinkDB
Position
8:16494070..16518260
AA seq 1296 aa
MEEEDRSTKRQEARTPHRPFEDERPLFHSNQTPPGPSEPFLLPGSDVKVPYTINRYLRDY
QREGIKFIYHSYVKSRGCILGDDMGLGKTVQVIGFLAAVLQKTGTWKDVENNRPQFLLSQ
KPSEQVQKVFLIVAPLSVLYNWKDELDTWGHFRVVVVHGVRKDEELARVQRGRCEIALTT
YETLRLCLDQFNSIDWAAVIVDEAHKIKNHKSQITQAMKEMRCKVRVGLTGTVLQNNLEE
LWCVMDWAIPGCLGSLAGFKNRFSDPIEHGHKHTVTKRALAEGRKAVQDLAKRLSRWFLR
RTKALISDQLPKKDDRVVYCSLTDFQRTVYRAVLDSNDVTLLLRSSGKCHCGSGRPRKKC
CYKLNADGVPVRHLYFSYLAILRKVANHVALLQYKEGTSKKQEKYVAAICEQVFRKFPDF
TERCKQAAFEAMSDPMYSGKMKVLQKLLNHFIAKKDKVLLFSLSTKLLDVLESYCMAEGL
EYHRLDGNTKSKDRVKIVKEFNSSRDVNLCLVSTLAGGLGLNFVGANVVVLFDPTWNPAN
DLQAIDRVYRIGQCRDVTVFRFISLGTVEEIIYLRQIYKQQLQSSVVGQENARRYFEAVQ
GTDGQAGELFGIRNLFRLQTDGTCLTHRILEREGRVEVGIMTARTQALDERLQEPDLQSA
DAATEKAGGSAGAGFKPAGVLDFSSASEDEDPCCSRSKPSETHTGEEGGAGTTCIGNMGL
YGLLQRQMAQRQRQEMDSDEDSSSQDEDNCEKPTMIKEQTSKTRDLSVQSREGLEEVTAE
QQKKSADLELLPTRSQKHNNDSKNHFHKRVKFVEEIPEDDLERFFSSEDEAPQEGIKCVK
GPSPQDNKSTDRWSSGRDNTTQKSLGMKSRNSLQTSGSDKTQSRDEDKNRTLDSLLGGLQ
HVSYTHSNQKIVGSSKAEDHLSRAAVRDVFELNKHSQQLANQLLDSSESQASDHALKDHI
DGSQTRQEYDSHLIKHPVTHTIKTSYRQKNVTVIVGETPSSMCRQQVEEMTQFFGFDSVR
DFAEDILKNSSEQRLSRLRSFYSQKSPELKNIIKKAFLKPNIEPEPYKQRPTSKRAHPNS
SLKPQVEVPIPRVEDGTKTLKKKKTVETETSEVHLHSSTDLINNKMKMSSTGKFSSSISG
HVAQSGSTSALVEESKSNITSSSQPFKDKEGPSRSSRVSTDGCVASDSTQTSSSSQITDL
LGDTSILDDLFKSKRKTVDQPKDVKTYTYTERAKSRGKDFWDILNEGNEESINKLTDLTE
VEKICNSVSISTKSRSNEETESSQLWRKNEKFLWKH
NT seq 3891 nt   +upstreamnt  +downstreamnt
atggaggaggaagacagatctacaaagcgacaggaagctagaacacctcatcgtccattt
gaggatgagaggcctctcttccacagcaatcagacgccaccaggaccttctgagccattt
ttgctgccaggaagtgatgtaaaagttccgtacaccatcaatcgctatttacgtgactac
caacgagaaggcattaaattcatctatcatagctatgttaaatctagaggatgcatcctg
ggtgatgatatgggtcttgggaagaccgttcaggtcatcggctttctggctgcagttctg
cagaaaacaggtacatggaaagatgtcgagaacaacaggccacagtttttgctgtcacag
aaaccatcagaacaagtgcagaaggttttcctcattgtggctccgctctctgttctctac
aattggaaagatgagttagacacgtggggtcatttcagagtggtggtcgtgcacggtgtg
aggaaggatgaagaattggcacgtgtgcagagaggaagatgtgaaattgctcttacaact
tatgagacccttagactctgtttggaccagttcaacagtattgattgggctgctgttatc
gttgatgaagctcacaaaataaagaaccacaagtcccagatcactcaggccatgaaggag
atgagatgtaaagtgagagttggactgacaggaacagtccttcagaacaacctggaggag
ttgtggtgtgttatggactgggccattcctggatgccttggttcactggcgggttttaaa
aacaggttttcagaccccattgagcatgggcacaagcacaccgtgacaaaaagagctctt
gcagaaggtcgtaaagcagttcaggaccttgccaaaagactctcacgctggttcctcaga
agaacaaaagccctcatcagcgatcagctacctaagaaggatgatcgagtagtctactgt
tctctcacagacttccagcggacagtttaccgtgccgtgctggactcaaacgatgtgacc
ctgctgttgcggagctcaggaaagtgtcactgtgggagtggccgtccacgaaagaagtgc
tgctacaaactgaacgcagacggagtgccggtcagacacttgtacttcagttatctggct
atcctgagaaaggtggccaatcatgttgcactactgcagtacaaagaaggaaccagtaaa
aagcaggagaaatatgtggcagccatttgtgagcaagtttttaggaaatttccagatttc
acagagaggtgcaaacaagcagcctttgaagcaatgtctgaccccatgtacagtggaaaa
atgaaggttctgcaaaagctactcaaccactttatcgcaaagaaagacaaagttctactc
ttctctctttccaccaagctgttagatgttctagaaagctattgtatggccgaaggtctg
gagtaccacagactggatggaaacaccaagtctaaggaccgagttaagatagtgaaagag
ttcaacagctctcgggatgtcaacctgtgtctggtgtctaccttggcgggtgggcttggt
ctcaacttcgttggagcgaatgttgtcgtgctgtttgatccaacatggaatcctgccaat
gatcttcaggctattgacagggtgtatcgtattggccagtgcagggatgtgacggttttt
agatttatctctttaggaacggtagaggagatcatatacctgcgccagatttacaaacag
caacttcagtcatcagtcgtaggccaggagaatgctagacgctacttcgaggctgttcag
ggtaccgacgggcaggcaggagagctgtttggcatccgaaaccttttccgtctacagact
gatggcacctgtcttactcaccgcatcctagagagggagggccgagtggaggtggggatc
atgacggccagaactcaagctctggatgagaggctgcaggagccagatcttcagtcagca
gatgctgctactgagaaagcaggtggatcagcaggtgctgggtttaaacctgctggggtg
ttggacttcagcagtgcaagtgaagatgaagatccctgctgctcgaggtccaagccctca
gaaacacacacaggagaagaagggggagctggtactacctgcattggcaatatgggcctg
tatggtctgcttcagagacagatggctcagagacaacgtcaggagatggacagcgatgag
gactctagtagccaggatgaggacaactgtgaaaaacccaccatgattaaggaacagaca
tccaagacacgggatctgtccgttcaatcaagggaagggttggaggaagtcactgcagaa
caacagaaaaaatcagcagaccttgagctccttccaacaagatcacagaaacacaacaac
gacagcaagaatcattttcacaaaagggtgaagtttgtagaagaaatacctgaagatgat
ctcgaacgttttttttcatcagaagatgaagctccccaggaaggcatcaaatgtgtgaag
ggtccttctcctcaggacaataaatcaactgacagatggtcctcagggagggacaacact
actcaaaaatctttgggaatgaagagccgaaactcactgcaaacatcaggatctgacaaa
acccaatccagagatgaagataaaaacagaacactggactcattattaggtggacttcag
catgtgagctacacccactctaatcagaagatagtgggctccagcaaagcagaagaccac
ctgagccgtgctgccgtacgagatgtgtttgaactcaacaagcattcacagcagctggca
aaccagcttctggactcatcagagagccaagcatctgatcacgcactcaaagatcacatt
gatggaagtcagacacggcaggaatatgacagtcacctaattaagcatccggtcacacac
accatcaaaacctcttaccgccagaaaaatgtcactgtcattgtgggcgagacacctagt
agcatgtgcagacagcaggtggaagaaatgactcagttctttggatttgactctgtacgg
gattttgcagaagacattctgaaaaacagttcagagcagagactgagccgattacggagc
ttctacagccagaagagccctgaactcaagaacatcatcaaaaaggcctttcttaaaccc
aacatcgagccagagccttataaacaaagacctacctcaaaaagagcccacccaaactct
tctcttaaacctcaagttgaagtaccaatccctagggttgaggatggaacaaaaacattg
aagaaaaagaagacggttgaaacagaaacctctgaggttcaccttcattccagtacagac
ctcataaacaataaaatgaagatgtcctccacaggcaaattctcatcatcaatttctgga
catgttgctcaaagcggtagcaccagtgcactagtagaagaaagtaaaagcaacattact
agttcctcacagcctttcaaggacaaggaaggcccatcacggtcatctcgcgtctccaca
gatggttgtgttgcatcagactcaacccagactagcagctcctcacaaatcaccgacctt
ttaggagacacatccatcctggatgacttgttcaagtcaaagaggaaaaccgtagaccaa
cctaaagatgtgaaaacatacacatatacagaaagagcaaaaagtagaggaaaggacttc
tgggacattttgaatgaggggaacgaggagagcattaacaaactcacggatctgacagag
gtggagaagatctgtaacagtgtcagtatctctacaaagtctaggagtaatgaggaaact
gaaagctctcaactttggagaaagaatgagaaatttctttggaaacattag

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