Labeo rohita (rohu): 127170228
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Entry
127170228 CDS
T09007
Name
(RefSeq) DLA class II histocompatibility antigen, DR-1 beta chain-like
KO
K06752
MHC class II antigen
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04145
Phagosome
lroh04514
Cell adhesion molecules
lroh04672
Intestinal immune network for IgA production
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
127170228
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127170228
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
127170228
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127170228
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127170228
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
127170228
Exosomal proteins of epithelial cells
127170228
Exosomal proteins of breast milk
127170228
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Paralog
Gene cluster
GFIT
Motif
Pfam:
C1-set
MHC_II_beta
C2-set_2
Ig_3
Motif
Other DBs
NCBI-GeneID:
127170228
NCBI-ProteinID:
XP_050974026
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All DBs
Position
8:complement(10003194..10011177)
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AA seq
252 aa
AA seq
DB search
MSLLKHKNCHLILTLAAFFGAESANEHYTARWSRCIYSSFDLSNMVYIDSFYFNKYLFTQ
FNSTVGRFVGFNEYGKSVAEKWNNDSFLQSEIASVNTQCTFHIKLRESKVHERTVKPKVK
LSSVTQTDGSYPAVLMCSAYEFYPQHIKVSWLRDGEVMTSDVTSVMEMADGDWYYQIHSE
LAYVPKPGEKISCMVEHASSTQPIITNWDPSLPESERNKIIIGVVVLVLGIIIAAAGLIY
YRMKLTGRTLRH
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgtcactactaaagcacaagaactgtcatctcatattaacactggctgcattttttgga
gcagaaagtgctaatgaacattacacagcccgttggtcaagatgcatctacagctccttt
gatttaagcaatatggtctatattgacagcttttattttaataaatatctgttcacacag
ttcaacagcacagtgggaaggtttgtggggtttaatgagtatggaaaaagtgttgcagag
aaatggaacaacgactcctttctgcagtcagagatagcaagtgttaatacacaatgcaca
tttcatattaaactcagggaatcaaaagtccatgaaagaacagtgaaaccgaaggttaag
ctcagttcagtgacacagacggatggcagttacccagctgtgttgatgtgcagcgcatat
gaattttatccacaacacatcaaagtgtcctggctgagagatggtgaagtgatgacctca
gacgtgacctcagttatggagatggctgatggagactggtactaccagattcactctgag
ctggcatacgtcccaaaaccgggagagaagatctcctgtatggtggagcatgccagctca
actcaacctatcatcacaaactgggatccatctcttcctgagtctgagaggaataaaatc
attattggtgttgttgtactggtgctgggaatcatcatagcggctgctggactcatttac
taccggatgaaattaacagggaggacattacgtcattaa
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