KEGG   Labeo rohita (rohu): 127171006
Entry
127171006         CDS       T09007                                 
Name
(RefSeq) toll-like receptor 8
  KO
K10170  toll-like receptor 8
Organism
lroh  Labeo rohita (rohu)
Pathway
lroh04620  Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:lroh00001]
 09150 Organismal Systems
  09151 Immune system
   04620 Toll-like receptor signaling pathway
    127171006
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04054 Pattern recognition receptors [BR:lroh04054]
    127171006
   04090 CD molecules [BR:lroh04090]
    127171006
Pattern recognition receptors [BR:lroh04054]
 Membrane-bound pattern recognition receptors
  Toll-like receptors
   127171006
CD molecules [BR:lroh04090]
 Proteins
  127171006
SSDB
Motif
Pfam: LRR_8 LRR_4 TIR LRR_5 TIR_2 LRRNT LRR_Zer-1 LRR_9 LRR_LRWD1
Other DBs
NCBI-GeneID: 127171006
NCBI-ProteinID: XP_050975359
LinkDB
Position
9:35798253..35805359
AA seq 1024 aa
MVKKLDVWLIVTLKISLTLCQMDVVSLKTQPCDIHNNVTTMTVVVNCRERGLKKVPALLT
NTTDLDLSENKIKNITARDFQNLANLTNLNLNWLNKNQDVLVGTGVFSNMTKLQTLQLNG
IGLKDVPKDIPKNLQVLKLVENKITRLNLTSFRHLQNLSLIFLSRNCYYWNPCSRNYHIE
DGSFSVLTQLKHLTLSYNNLTQVPKGLPESLITLELASNSISYVGEHDFRGLDNLTSLKI
QGNCPRCHNAPYPCVPCKNVSIEIHPRAFGGLAKLRLLHLAGNSIEKIDPTWFANISKLE
ELYLSFNFLFSAVQDDVFLNNLPLLTKLDLSFNYAFKTYPDTITLSPSFANLTSLRTLHL
RGLVFREIRTNTFSSLFGLQNLSVFDMGINFIVRAHAEIFEKFQHVKLIYLSENRLYPVT
VNGELGKATGVGLKSSSMMPSMSEPYPKGNSFDIPKELVKPECYAAGRVLDLSRNNLFLI
SPEQFEFYGNVSCLNLSGNGFATAPNGSEFTSLPDLKYLDLSFNKIDLAYDYAFRELQSL
EVLDLSYNPHYFTVQGVTHNLNFLKYLPSLKVLNMSYNSIYTLTTKTMSSTSLQELQFQH
NSLGKMWRVRDKTYDRLFENLTNLTYLDISYNYIGKIALRIYQHLPRSIQRLQLSHNRLT
NISWEMLRQFPHLRELILSNNNIFKISSNLSNDVPTLEFLDLRHNQISELSTGFLLGAVN
LQRLDLSHNRLININQSTFPSEPKPYLKSLSLNGNPFHCTCNLFEFVLWIRKTNVKIPRL
VTAVTCAMPKERKGEAVVNFDIKECIDDQLAFLAYFFSTFCIICTTFVAVAMHLFYWDVS
YLFYYLKARFTGYQHLSSDSCIYDAFITYDTKDEQVSDWVLNHLRVQLEEQGERFLPICL
EERDWVPGSPVVDSLTQSIQHSRKTVFVLTERYVNSGSFKLAIFLAHQRLLEDNEDVIVL
LLLEPVLQHSHFLRLRRRLCGRSILEWPHSQSAEAWFWQSLRNAIRVDNQAIYSELYSRY
FTIK
NT seq 3075 nt   +upstreamnt  +downstreamnt
atggtgaaaaaactagacgtctggctcattgtgacactgaagatctcactaaccctttgt
caaatggacgtggtgagtctaaagactcaaccctgcgatatacataacaatgtgaccaca
atgacggttgttgtcaactgccgtgaacgtggacttaaaaaggtgccagcgctcctaaca
aacacaaccgaccttgatctatcggagaacaaaatcaagaacataacagcaagagatttc
caaaacttggcaaatctgaccaatctaaatctgaactggctgaataaaaatcaggatgtt
cttgttggcaccggggtgttttcaaatatgaccaagctacaaacactgcagcttaacggg
atcggtctaaaggacgtgccaaaagatattccaaagaatctgcaggtactaaagctggtt
gagaacaagatcacccggttaaacttaacatccttcaggcatttgcaaaatctgtcactc
attttcctttcaagaaactgctactactggaatccttgctcgagaaattatcatatagaa
gatggaagtttttctgttctgacccagttgaaacatctcactttgtcttacaacaactta
actcaagtccctaaaggattacctgagtcattgataacacttgagcttgcttcaaacagc
atatcgtacgtcggagagcatgatttccgaggacttgacaatctgacgagtctaaaaatc
caagggaactgtccacgatgtcataatgctccatatccatgcgttccatgtaaaaacgtg
tccattgaaattcatccacgagccttcggtggcctcgcaaagctgcggcttctgcacctc
gctggaaattcgattgagaaaatcgatcctacttggttcgcaaacatctcaaagcttgag
gaactctacctgtcgtttaatttcttgttcagtgctgttcaagatgatgttttcttgaat
aatctgccactgctgacaaaactagatctctcgtttaactatgccttcaagacttacccc
gacacaattacactatcgcccagctttgcgaacttaacctcgctgaggacgctgcatctt
cgaggcttggtttttcgagaaatccgtacaaacacctttagctctctgtttggtttacaa
aatctatcagtgtttgatatgggaataaacttcattgtccgcgcacacgcggagatattt
gaaaaatttcaacatgtgaaactcatctatctttcggaaaacagactttacccggtgacc
gtaaacggggagttgggtaaagccacaggcgttggtttaaaatcttcatccatgatgccc
tcaatgtcagaaccttatcctaaagggaattcctttgatattccaaaagaacttgtgaaa
ccagagtgctacgccgccggtcgcgtgttggatctaagccgaaataacctgttcttaatt
tcccctgaacagtttgagttttacggaaacgtatcttgcctcaacctctccggaaatggc
tttgccacagctccgaatggatctgaattcacatctctcccagacctcaaatatctagac
ttgtccttcaacaaaattgacctggcatacgactacgccttccgagagttgcagagtctt
gaggtgctagatcttagttacaacccccattacttcactgtgcaaggtgtgacccacaat
ttgaactttctcaaatatttaccctctttgaaagtgttaaatatgagctacaatagcatc
tatacgttaaccaccaaaaccatgtcaagcacttctcttcaagagctgcaattccagcac
aatagtctcggcaagatgtggagagtgagagacaaaacctacgacaggctgtttgaaaat
ttgaccaatctgacctatcttgacatatcctataactacatcgggaagatcgctcttcga
atttaccaacatcttcccagaagcattcaaaggttgcaattaagccacaatcgcctgaca
aatattagctgggaaatgttgagacaattccctcatctacgagagctaattttaagtaac
aacaacatctttaaaatatctagtaacttgtcaaatgatgttcctactttagagttcctt
gatctgcggcacaaccaaatatccgagctctccactggattcctcctgggagcggtaaac
ctacagaggcttgatctcagtcacaaccgcctcataaacatcaaccagtccacgtttcca
tctgaacccaagccttacctaaagtcactgtcactcaacggaaaccctttccactgcaca
tgcaacctgttcgaattcgttctgtggattcgcaagactaacgtgaagatccccagattg
gtgactgcggtgacgtgcgccatgccgaaagagaggaaaggtgaagcagtggtaaatttt
gacattaaagaatgcatcgatgaccagttggcttttctggcatacttcttctccactttt
tgcattatatgcaccactttcgtggccgtcgcaatgcaccttttctactgggacgtttca
tacctattctactatttgaaagccagattcactggatatcagcacctaagctctgacagc
tgcatctatgatgccttcatcacctacgacaccaaggacgagcaggtgtctgactgggtg
ctcaatcacctgcgggtgcagctggaggagcaaggtgagcgattcctgcccatttgtctg
gaggaaagagactgggttcccggttctcccgttgtggacagtctgacgcagagcatccag
cacagccgcaaaaccgtctttgtcctgacagagcgctacgtgaacagcggctcatttaag
ctggccatcttcctggcgcaccagaggcttctcgaggataatgaggacgtcattgtgctg
ctgcttctggagcccgtgttgcagcactcccatttcctgcggctgcgcaggcggctgtgc
gggcgcagcattctcgagtggccgcattcgcagtctgccgaagcctggttctggcaatcg
ctgcggaacgccatacgggtggacaaccaggccatttacagcgaactttacagcagatat
tttaccattaagtag

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