Labeo rohita (rohu): 127171006
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Entry
127171006 CDS
T09007
Name
(RefSeq) toll-like receptor 8
KO
K10170
toll-like receptor 8
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04620
Toll-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127171006
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127171006
04090 CD molecules [BR:
lroh04090
]
127171006
Pattern recognition receptors [BR:
lroh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127171006
CD molecules [BR:
lroh04090
]
Proteins
127171006
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_5
TIR_2
LRRNT
LRR_Zer-1
LRR_9
LRR_LRWD1
Motif
Other DBs
NCBI-GeneID:
127171006
NCBI-ProteinID:
XP_050975359
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All DBs
Position
9:35798253..35805359
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AA seq
1024 aa
AA seq
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MVKKLDVWLIVTLKISLTLCQMDVVSLKTQPCDIHNNVTTMTVVVNCRERGLKKVPALLT
NTTDLDLSENKIKNITARDFQNLANLTNLNLNWLNKNQDVLVGTGVFSNMTKLQTLQLNG
IGLKDVPKDIPKNLQVLKLVENKITRLNLTSFRHLQNLSLIFLSRNCYYWNPCSRNYHIE
DGSFSVLTQLKHLTLSYNNLTQVPKGLPESLITLELASNSISYVGEHDFRGLDNLTSLKI
QGNCPRCHNAPYPCVPCKNVSIEIHPRAFGGLAKLRLLHLAGNSIEKIDPTWFANISKLE
ELYLSFNFLFSAVQDDVFLNNLPLLTKLDLSFNYAFKTYPDTITLSPSFANLTSLRTLHL
RGLVFREIRTNTFSSLFGLQNLSVFDMGINFIVRAHAEIFEKFQHVKLIYLSENRLYPVT
VNGELGKATGVGLKSSSMMPSMSEPYPKGNSFDIPKELVKPECYAAGRVLDLSRNNLFLI
SPEQFEFYGNVSCLNLSGNGFATAPNGSEFTSLPDLKYLDLSFNKIDLAYDYAFRELQSL
EVLDLSYNPHYFTVQGVTHNLNFLKYLPSLKVLNMSYNSIYTLTTKTMSSTSLQELQFQH
NSLGKMWRVRDKTYDRLFENLTNLTYLDISYNYIGKIALRIYQHLPRSIQRLQLSHNRLT
NISWEMLRQFPHLRELILSNNNIFKISSNLSNDVPTLEFLDLRHNQISELSTGFLLGAVN
LQRLDLSHNRLININQSTFPSEPKPYLKSLSLNGNPFHCTCNLFEFVLWIRKTNVKIPRL
VTAVTCAMPKERKGEAVVNFDIKECIDDQLAFLAYFFSTFCIICTTFVAVAMHLFYWDVS
YLFYYLKARFTGYQHLSSDSCIYDAFITYDTKDEQVSDWVLNHLRVQLEEQGERFLPICL
EERDWVPGSPVVDSLTQSIQHSRKTVFVLTERYVNSGSFKLAIFLAHQRLLEDNEDVIVL
LLLEPVLQHSHFLRLRRRLCGRSILEWPHSQSAEAWFWQSLRNAIRVDNQAIYSELYSRY
FTIK
NT seq
3075 nt
NT seq
+upstream
nt +downstream
nt
atggtgaaaaaactagacgtctggctcattgtgacactgaagatctcactaaccctttgt
caaatggacgtggtgagtctaaagactcaaccctgcgatatacataacaatgtgaccaca
atgacggttgttgtcaactgccgtgaacgtggacttaaaaaggtgccagcgctcctaaca
aacacaaccgaccttgatctatcggagaacaaaatcaagaacataacagcaagagatttc
caaaacttggcaaatctgaccaatctaaatctgaactggctgaataaaaatcaggatgtt
cttgttggcaccggggtgttttcaaatatgaccaagctacaaacactgcagcttaacggg
atcggtctaaaggacgtgccaaaagatattccaaagaatctgcaggtactaaagctggtt
gagaacaagatcacccggttaaacttaacatccttcaggcatttgcaaaatctgtcactc
attttcctttcaagaaactgctactactggaatccttgctcgagaaattatcatatagaa
gatggaagtttttctgttctgacccagttgaaacatctcactttgtcttacaacaactta
actcaagtccctaaaggattacctgagtcattgataacacttgagcttgcttcaaacagc
atatcgtacgtcggagagcatgatttccgaggacttgacaatctgacgagtctaaaaatc
caagggaactgtccacgatgtcataatgctccatatccatgcgttccatgtaaaaacgtg
tccattgaaattcatccacgagccttcggtggcctcgcaaagctgcggcttctgcacctc
gctggaaattcgattgagaaaatcgatcctacttggttcgcaaacatctcaaagcttgag
gaactctacctgtcgtttaatttcttgttcagtgctgttcaagatgatgttttcttgaat
aatctgccactgctgacaaaactagatctctcgtttaactatgccttcaagacttacccc
gacacaattacactatcgcccagctttgcgaacttaacctcgctgaggacgctgcatctt
cgaggcttggtttttcgagaaatccgtacaaacacctttagctctctgtttggtttacaa
aatctatcagtgtttgatatgggaataaacttcattgtccgcgcacacgcggagatattt
gaaaaatttcaacatgtgaaactcatctatctttcggaaaacagactttacccggtgacc
gtaaacggggagttgggtaaagccacaggcgttggtttaaaatcttcatccatgatgccc
tcaatgtcagaaccttatcctaaagggaattcctttgatattccaaaagaacttgtgaaa
ccagagtgctacgccgccggtcgcgtgttggatctaagccgaaataacctgttcttaatt
tcccctgaacagtttgagttttacggaaacgtatcttgcctcaacctctccggaaatggc
tttgccacagctccgaatggatctgaattcacatctctcccagacctcaaatatctagac
ttgtccttcaacaaaattgacctggcatacgactacgccttccgagagttgcagagtctt
gaggtgctagatcttagttacaacccccattacttcactgtgcaaggtgtgacccacaat
ttgaactttctcaaatatttaccctctttgaaagtgttaaatatgagctacaatagcatc
tatacgttaaccaccaaaaccatgtcaagcacttctcttcaagagctgcaattccagcac
aatagtctcggcaagatgtggagagtgagagacaaaacctacgacaggctgtttgaaaat
ttgaccaatctgacctatcttgacatatcctataactacatcgggaagatcgctcttcga
atttaccaacatcttcccagaagcattcaaaggttgcaattaagccacaatcgcctgaca
aatattagctgggaaatgttgagacaattccctcatctacgagagctaattttaagtaac
aacaacatctttaaaatatctagtaacttgtcaaatgatgttcctactttagagttcctt
gatctgcggcacaaccaaatatccgagctctccactggattcctcctgggagcggtaaac
ctacagaggcttgatctcagtcacaaccgcctcataaacatcaaccagtccacgtttcca
tctgaacccaagccttacctaaagtcactgtcactcaacggaaaccctttccactgcaca
tgcaacctgttcgaattcgttctgtggattcgcaagactaacgtgaagatccccagattg
gtgactgcggtgacgtgcgccatgccgaaagagaggaaaggtgaagcagtggtaaatttt
gacattaaagaatgcatcgatgaccagttggcttttctggcatacttcttctccactttt
tgcattatatgcaccactttcgtggccgtcgcaatgcaccttttctactgggacgtttca
tacctattctactatttgaaagccagattcactggatatcagcacctaagctctgacagc
tgcatctatgatgccttcatcacctacgacaccaaggacgagcaggtgtctgactgggtg
ctcaatcacctgcgggtgcagctggaggagcaaggtgagcgattcctgcccatttgtctg
gaggaaagagactgggttcccggttctcccgttgtggacagtctgacgcagagcatccag
cacagccgcaaaaccgtctttgtcctgacagagcgctacgtgaacagcggctcatttaag
ctggccatcttcctggcgcaccagaggcttctcgaggataatgaggacgtcattgtgctg
ctgcttctggagcccgtgttgcagcactcccatttcctgcggctgcgcaggcggctgtgc
gggcgcagcattctcgagtggccgcattcgcagtctgccgaagcctggttctggcaatcg
ctgcggaacgccatacgggtggacaaccaggccatttacagcgaactttacagcagatat
tttaccattaagtag
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integrated database retrieval system