Labeo rohita (rohu): 127171230
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Entry
127171230 CDS
T09007
Symbol
rapgef4a
Name
(RefSeq) rap guanine nucleotide exchange factor 4 isoform X1
KO
K04351
Rap guanine nucleotide exchange factor 4
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04081
Hormone signaling
lroh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04081 Hormone signaling
127171230 (rapgef4a)
09150 Organismal Systems
09153 Circulatory system
04261 Adrenergic signaling in cardiomyocytes
127171230 (rapgef4a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127171230 (rapgef4a)
Membrane trafficking [BR:
lroh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab associated proteins
127171230 (rapgef4a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RasGEF
cNMP_binding
DEP
RasGEF_N
RA_2
PDC10_C
Motif
Other DBs
NCBI-GeneID:
127171230
NCBI-ProteinID:
XP_050975698
LinkDB
All DBs
Position
9:2571234..2640831
Genome browser
AA seq
1025 aa
AA seq
DB search
MISPKMVAAHTSSHPSASAEWIICLDKRPEERSGEDVDIILARLKSVKAFEKFHPALLQQ
ICLCGFYECLEKGITLYRQGDIGTNWYTVLSGSLDVKVSETANHQDAVTICTLGIGTAFG
ESILDNTPRHATIVTREFSELLRIEQKDFRTLWENYRQCMAGLLVPPYGVMESGPNADRM
PDKENLSNSSPGSSSKHLNKKSFIQSPTKLHPKSITQVPSEKILRAGMVLRNTILSRAPQ
MIRDRKYHLKTYKQCCMGTELVDWLMQHTSCVHSRVQAVGMWQVLLEEGVLNHVDQELSF
QDKYLFYRFLDDETEDAPLPTEEEKKESDEELQDTLLLLSQIGPDAHLRMILSKQPGQRT
VDDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKAGTVLFNQGEEGTSWYIILKG
SVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRDV
EANTVRLKEHEEDVLVLEKTNNRGSSSSPLKYTVMSGTPEKILEHLLETMKLDSQFTESD
PALDDFLLMHCVFVPNSQLCPLLMAHYHAQSSQGSEQERMDYALNNKRRVIRLVLQWAAI
NTDHLQEEDSSFNFLQEFYETVCEDARLIPALKDQLPELEKFIKQNCDDGRPSQKKHKVL
LRQFSTGNDRLQKRQPIKSTDEILFKVYCSDHTYSTIRVPVAASVREVITAVTDKLGSGD
DLLLIHLNSAGDKELLKPSDVSIFSSLSINGRLFVCPRDQIDSLTPLPEQEGPSAGSMST
FELMSSKDLAHQMTLYDWELFDCVHEHELIYHTFGRQHFKKTTANLDLFLRRFNEVQLWV
VTEVCLCPTLSKRVQLLKKFIKIAAHCKEFKNLNSFFAIIMGLGNPAVCRLNQTWEKLPS
KFKKFYGEFENLMDPSRNHRAYRLTMAKLEPPIIPFMPLLIKDMTFTHEGNKTFTDRLVN
FEKMRMIANTVRIMRYCRSQPFNQEAPQVTGKSHQDVRSYVRHISVIDNQRTLSQLSHRL
EPRRT
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgatttcaccgaagatggtcgcggctcacacctccagccacccgtccgcctctgctgaa
tggatcatctgtctggataagagaccggaggagcgttcgggggaggatgtggacataatc
ttggcccgtctgaaaagtgtgaaggccttcgagaagttccaccccgctctacttcagcag
atctgtctgtgtggcttctatgaatgtctggagaaaggcatcactttgtacaggcagggt
gacattgggactaactggtacactgtcctgtctggatctctagatgtcaaagtctcagaa
acagcaaaccatcaggatgctgtcaccatctgcacattgggcatcggcacagcattcggg
gagtctattctggacaacacgccgcggcacgccaccattgtcacccgagagttcagtgaa
ctactgcggattgagcaaaaggactttaggaccctgtgggagaattatcgtcagtgtatg
gctggtctgctggtccctccctatggtgttatggagagcggcccaaatgctgacagaatg
cctgacaaagagaatctgagcaacagttcacccggatcatcatcaaaacacttaaataag
aaatcattcattcaaagtcccaccaaacttcaccccaaatccattactcaggtgccgtca
gaaaagatcctacgggcaggtatggtgttacgaaacaccatcttgtcccgagcacctcaa
atgatcagagacaggaagtaccaccttaaaacatacaagcagtgctgtatgggcacggag
cttgttgattggctgatgcagcacacttcctgtgtccactctcgtgttcaggctgtaggg
atgtggcaggtgctgctggaggagggcgtcctaaaccatgtggatcaggagctgagtttc
caagataagtatctgttttatcgcttcctggacgatgagacagaggacgcacccctcccc
actgaggaagagaagaaagagagtgatgaagaactacaggacaccctcctgctcctctct
cagatcggacctgatgcccatctgcgaatgatcctgagtaaacagcctggccagaggaca
gtagatgacctggagatcatttatgaggagctgctgcatattaaagccttatcacatctg
tccaccactgtgaagagggaactagctggtgttctgatatttgagtcccacgccaaagca
ggcacagtgttgtttaatcaaggggaggagggcacgtcatggtacatcatcctgaagggc
tcggttaacgtggtgatctatggaaagggtgtagtttgcacgttacatgagggagatgac
ttcgggaagttggctctggtgaatgacgcacctcgggcagcgtctatcgtactgagagag
gacaactgccactttctgagagtggataaagaagacttcaacagaatcctcagggatgtg
gaggcaaacactgtccgtctgaaggaacatgaagaggatgtgttggttttggagaaaact
aacaacaggggctccagttcatctcctctcaaatatactgtgatgtcaggaactccagag
aagattctggaacatcttctggagacaatgaaactcgactcccagttcacagagtcagat
cctgctttggatgactttttgcttatgcactgtgtttttgtcccgaacagtcagttgtgt
ccactgctcatggcccattatcatgctcagtcgtctcagggcagtgaacaggagcggatg
gattacgctctcaataacaagcgcagggtgattcgtctggtgttacagtgggccgccatc
aacacagaccacctgcaggaggaggacagctctttcaacttcctccaggagttttatgaa
acagtttgtgaagatgccagactcattccagcactgaaagaccagctgcccgaactagag
aagttcatcaaacagaactgtgatgatggccgtccctctcagaaaaagcacaaagtcctg
ctgcgtcagttcagcacagggaacgacagactgcagaagagacagccaatcaaaagcaca
gatgagatcctctttaaggtgtactgcagtgatcatacctactccacaatccgagtgccc
gtcgctgcgtctgtcagagaggtcatcactgcagttaccgataagctgggctcaggagat
gatcttctgctcatccacctcaactcagccggagataaagagcttctaaagccatcagat
gtgtccatcttctcatcactgagtattaatggccgtctgtttgtctgcccgagggatcag
atcgactctttgactccactgccggagcaggaagggccgtctgcaggctccatgtccacg
tttgaactcatgagctctaaagatctggctcatcagatgacgctctatgactgggagctc
ttcgactgtgtgcacgagcatgagctgatttaccacacgtttggccgtcagcatttcaag
aagaccacggctaatctggatctgttcctgcggcgttttaatgaggttcagctgtgggtg
gtcacagaagtttgtttgtgtcccacgctcagcaaacgagtccaactgctcaagaagttc
atcaagatcgcagcgcactgtaaagagtttaagaatttgaactcattctttgccattatc
atgggcctgggaaaccctgcggtttgtcgactcaatcagacatgggagaaactgcccagc
aagttcaagaagttttatggggagtttgaaaacctgatggatccctccagaaatcacaga
gcatatcgacttaccatggccaagttagaaccacctattattcccttcatgcctttatta
attaaagacatgactttcacacatgagggtaacaagacgtttactgacagactggtgaac
tttgagaaaatgagaatgattgcaaacacagtcagaatcatgagatactgccgaagtcag
ccattcaatcaagaagcaccacaggtgactggtaaaagccatcaggacgtgcggagctat
gtgcgtcacattagcgtgattgacaaccagcgcaccctatcacagctgtcccacaggctg
gagccgcgccggacctga
DBGET
integrated database retrieval system
