Labeo rohita (rohu): 127171251
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Entry
127171251 CDS
T09007
Symbol
gli2a
Name
(RefSeq) zinc finger protein GLI2a isoform X1
KO
K16798
zinc finger protein GLI2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127171251 (gli2a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127171251 (gli2a)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
127171251 (gli2a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
zf-C2H2_aberr
Motif
Other DBs
NCBI-GeneID:
127171251
NCBI-ProteinID:
XP_050975727
LinkDB
All DBs
Position
9:25140637..25235848
Genome browser
AA seq
1438 aa
AA seq
DB search
METTSPTTTEKKECKGSGLDGSSFSDLPKKPSPTTASRAPHLFSTFHTPIPIDMRHHEGR
YHYEPHPLHPMHGPHGLAGSPVISDISLIRLSPHAATTGESPFNPPHPYVNPHMEHYLRS
VHSSPTLSMISAARGLSPADAVTHEHLKERSLFGLPPPPPGANPSEYYHLIASHRSPYGD
LLMPAGAAAAHLPDYMSPVDMSRFPSPRLTPRVSRKRALSISPVSDASIDLQTMIRTSPN
SLVAYINNSRSSSAASSSYGHLSVGAISPSFTFPHPITPVAYHQLLSQQRGLNAFGHTPP
LLQPSPSLSTRQTLVAAAALTNNNSADTNTESSQNAGGDPAVSSTVNPMIFKRSKVKTEA
DGPRPISPGSQDHMELREELDKDECKQEPEAVYETNCHWEGCSKEYDTQDQLVHHINNDH
IHGEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKT
HLRSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLR
KHVKTVHGPEAHVTKKQRGDAPPKPHPPKGNGENEAHTKHARGRSDGSVEANSTTRGVED
CQHVKSIKTENTVMYQSSPGGQSSCSSEPSPLGSATNNDSGVEMAMHSGGSLGDLSALDD
TPVVDSTGSPGTSAGVCLQLRKNRGGLLHLENIKKEKLKTVRDPCSWANTSPQVRNTKLP
PIPSIDSLLETPNLGGQMPGPPTQRLGDLSSYEMTMLNQLQERRDSSTSTMSSAYTLSRR
SSGISPCYSSRRSSEASQFGVRNNNISSADSYDPISTDLSRRSSEASHCGGAGGLTSLLN
LTPAQHYRLKAKYAAATGGAPPTPLPNMDRMSLRTRMALYNDSQESSAHLHHSQGVVNSR
RCSDTGYGVPGMMPHEVPANLPRRASDPVRRTVIDPLSLPRVQRFNSISNMTLSRLPAID
RRTFNLQSNTWSDGSLHRHPFSQRPPSISENVLMENMASDGGDQQEDDLVLPDDMVQYLK
SQNGSSNQDPGISVNGGHGLDFHGNMPSQQQFYGQRRMGMTSNNGSHVEPVGPAPEQMPN
PQGMNKNNMPVQWNEVSSGSVDTTARLPKQQQLRGNLTVVQQKQNFGSYQGFGTNQQIIP
MSQNLASLQQAYPQRATQRMNSVQQYRQSVNNPCQNLGEQGNPQPGYRQELSYNSSQRLT
CNGVGPPNGRVVQNQELQNYRSNFAHISNVNQQNYVPLTQTAVQNAGRGLIQPRPPPEPK
PLNRQHSGSGMVQQNGCSLSNANSSEASPKRPADFGQHSNGHGTVYYSGEIHMLDSSVDY
GSPMSPCANQGPVASVSTMASPGVNQVTSTVDSTQTLEHTQIDFDAILDDGDHSSLMSGT
LSPGLLQSLSQNSSRLTTPRNSVTLASIPAGIGNMAIGDMSSMLTALAEESKFLNMMA
NT seq
4317 nt
NT seq
+upstream
nt +downstream
nt
atggagaccacgagtcccaccaccacagaaaagaaggaatgcaaggggtcaggcctggat
ggcagcagtttctcagaccttcccaaaaagccctcaccgaccacagcatcccgagctcct
cacttattctcgaccttccacacgccgattccgatcgacatgcggcaccatgaggggagg
taccattacgagccgcatcctctgcaccccatgcatggaccgcacggattagctggcagt
ccagttatctctgatatctcgctcatccgactatctcctcatgccgcgactactggagaa
tcacccttcaaccctcctcacccgtatgtcaacccacacatggagcactacctgcgatca
gtccacagcagccccacgctctcaatgatctccgcagcacgaggactgagccctgcggac
gcagtgacccatgaacacctgaaggagcggagcttgtttggcctacctcctcccccaccg
ggggccaacccttcagagtattatcacctcatcgccagtcaccgcagcccttatggagac
ctgctcatgccggcaggagccgcagctgctcatctccctgactacatgagcccagtggac
atgtcccgtttccctagtcccagactgacgccgagggtgagcaggaagcgagcgctgtcc
atctctccagtctcggatgccagcatcgacctacagaccatgatccgcacctcgcccaac
tctctggtggcctacatcaataactcccgctccagctcggctgccagcagctcttacggc
cacctctccgtcggggccatcagtccctccttcacattcccacatcctatcacaccggtt
gcataccaccagctgctgtcccaacagagaggtctaaatgcgtttggacacactccccca
ctgctacagccttctccatccctcagcacccggcagacgctggtggcagcagctgctctg
accaacaacaacagtgctgacacaaacacggagtccagccagaatgccggtggagacccg
gctgtcagcagcacggtcaaccctatgatcttcaagaggtcaaaggtgaagactgaagca
gatggaccccgccccatctcgcctggctctcaggatcacatggagttgcgggaggaactt
gataaggatgaatgcaagcaagagccagaggccgtatatgagaccaactgccactgggaa
ggatgttccaaagagtatgacacccaggaccaactagttcatcatatcaataatgaccac
atccatggagagaaaaaggagtttgtgtgtcgatgggaggaatgctcacgagaacagaag
cctttcaaggcccagtacatgcttgtggtccacatgcgtcgtcacactggggagaagccc
cataagtgcacatttgaaggttgctcgaaggcttactctcgactggaaaacctcaaaact
cacttgaggtcccacacaggggagaaaccttacgtatgtgagcatgagggttgtaacaag
gcgttttccaacgcttcagaccgagccaagcaccagaaccgcacgcactcgaatgagaaa
ccatatgtgtgtaagataccaggttgcacaaaacgctatacagaccccagttcgctcagg
aaacatgtgaagaccgttcatggtccagaagcacatgtcactaagaagcaacgtggtgat
gcaccacctaaacctcaccctcctaaagggaatggagaaaatgaggcacacacaaagcat
gcaaggggaagatcagacgggtcagtggaagccaacagcaccacccgaggagtggaggat
tgccagcatgtcaaatcgatcaagacggaaaacacggtgatgtatcagtccagccctggt
ggtcagtcatcatgtagcagtgagccatcgccacttggcagcgccaccaacaatgacagt
ggagtagagatggccatgcacagtggaggcagtttgggggacctgagtgctttagatgac
acgcctgtagtagattctaccggttctccaggtacttctgcaggagtgtgtctccagctg
cgtaaaaacagaggaggactactacatcttgagaacatcaagaaggaaaagcttaaaact
gtaagagacccctgctcctgggcgaatacatcacctcaagtccgaaataccaagctgcct
ccaataccctctattgactcactgctggagactccaaatctgggtggtcagatgccagga
cctccaactcaacgtttaggagacttgtcgtcgtatgagatgacaatgctaaaccagctg
caagagcgcagagacagctccacaagcacaatgagctcagcatacacactcagtcgccgg
tcctccggtatttcaccctgctactccagtcgtcgctcgagcgaagcttcgcaatttgga
gtccgcaacaataacatcagctcagcggactcctacgaccccatctccacagatctttct
cgccgttccagcgaagctagccattgtggtggtgcaggtggacttacaagtttactaaat
ctcacgccggctcaacactaccgtctcaaagcgaaatacgctgcagccacagggggtgca
ccaccaacacctcttcccaacatggatcggatgagtcttagaactagaatggctctgtac
aatgactcacaggaaagttcggcgcatttgcaccattcccaaggtgtagtcaactcaaga
cgctgcagtgatactggctacggcgtccctgggatgatgcctcacgaagttccggccaat
cttccacgacgagcaagcgatcctgttcgtcgtacagttatcgacccgctctccttgcca
agggttcagcgattcaatagcatcagcaacatgaccttgtcacgtctgcctgcgatagat
cgacgtaccttcaacttgcaaagcaacacctggtctgatgggagcttgcatcgtcatccc
ttcagccagaggccacctagtatttcagagaatgttttaatggagaacatggcttctgat
ggaggtgatcagcaagaagatgatttggtgctaccagatgacatggtacagtacctcaag
tcccagaatggtagttcaaatcaagacccagggatttccgtcaacggtggtcatggacta
gacttccatggtaatatgccctcccaacaacaattctacgggcagcgccgaatgggcatg
acaagcaacaacggaagccacgtagaacctgttggcccagctccggagcaaatgcccaat
ccgcaaggcatgaacaagaacaacatgcctgtgcaatggaacgaggtcagttctggttct
gtggatacaactgcaaggcttccaaagcagcagcaactcagagggaacttgacagtggtt
cagcagaagcagaactttggctcctaccaaggctttggcactaatcagcagattataccg
atgagccagaatctggctagcctgcaacaggcttatccacagagggccacccaaaggatg
aactctgtccagcagtatcgacaatccgttaacaatccgtgtcagaacctcggtgagcaa
ggaaacccacaaccaggatatcggcaagagctcagttacaactccagtcagcgtcttaca
tgcaatggcgttggtccacccaatgggagagtggtgcagaaccaggagttgcagaattac
agatccaactttgcacatattagcaacgtcaaccagcaaaattacgttccccttactcag
acagccgttcaaaatgcaggcagaggactgatacagcccagacctccgcccgagcccaaa
cctttaaatagacaacactcagggtcaggtatggttcagcaaaatggctgctctctgtcc
aacgccaactcctcagaagctagcccaaagagaccagccgacttcggtcaacacagcaat
gggcatggcactgtgtactattcaggagagatccatatgttggacagtagtgtggattat
ggttctcccatgtctccgtgcgcaaaccaagggcctgttgcttcagtgtctacaatggcg
tctcctggggttaaccaggtcaccagcacagtggactccactcaaaccctcgagcacact
caaatagactttgatgctattttggatgatggagaccattcgagccttatgtctggcaca
ttaagtccgggccttctgcagagtctttcgcagaattcttcacggctcaccaccccgcgt
aactccgttacgctagcctcgatcccggcaggtattggcaacatggccattggtgacatg
agctcaatgttaacagcccttgcagaggaaagcaaattcttaaacatgatggcttga
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