Labeo rohita (rohu): 127172186
Help
Entry
127172186 CDS
T09007
Symbol
hmgcs1
Name
(RefSeq) hydroxymethylglutaryl-CoA synthase, cytoplasmic isoform X1
KO
K01641
hydroxymethylglutaryl-CoA synthase [EC:
2.3.3.10
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00280
Valine, leucine and isoleucine degradation
lroh00650
Butanoate metabolism
lroh00900
Terpenoid backbone biosynthesis
lroh01100
Metabolic pathways
lroh03320
PPAR signaling pathway
Module
lroh_M00095
C5 isoprenoid biosynthesis, mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
127172186 (hmgcs1)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
127172186 (hmgcs1)
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
127172186 (hmgcs1)
09150 Organismal Systems
09152 Endocrine system
03320 PPAR signaling pathway
127172186 (hmgcs1)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.3 Acyl groups converted into alkyl groups on transfer
2.3.3.10 hydroxymethylglutaryl-CoA synthase
127172186 (hmgcs1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_CoA_synt_C
HMG_CoA_synt_N
ACP_syn_III
PS_Dcarbxylase
Motif
Other DBs
NCBI-GeneID:
127172186
NCBI-ProteinID:
XP_050977316
LinkDB
All DBs
Position
10:23512404..23522559
Genome browser
AA seq
525 aa
AA seq
DB search
MIVSPFRMPGSLPTVCEAAWPKDVGIIAMEVYVPSQYVDQTELEEYDGVGAGKYTVGLGQ
ARMGFCSDREDINSLCLTVVQRLMERNGLSYESVGRLEVGTETIIDKSKSTKTVLMQLFE
ESGNTDVEGVDTTNACYGGTAALFNAVNWVESSSWDGRYALVVAGDIAVYATGSARPTGG
AGAVAMLVGPNAPLAFERGLRGTHMQHAYDFYKPDMVSEYPVVDGKLSIQCYLSALDRCY
SVYRNKIHAQWQREGLDKRCSLEDFGFMVFHSPYCKLVQKSLARLMLNDFLCHPSPNTES
GPFSGLDSFRDVKIEETYFDRDVEKAFMKASSELFDNKTKASLLISNQNGNMYTPSVYGC
LASVLAQHTPQQLAGQRIGVFSYGSGFAATLYSIKVTQDATPGSALDKMVSSLCDLQARL
DSRKKVSPDVFAQNMKLREETHHLANYIPQGSVDELFPGTWYLTRVDEKHRRQYARRSMN
DDRPLEAGLVSSSIAAEHIPSPLKKMPRIPTTTAGPEVVISNGEH
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgattgtaagtccattcaggatgcctggatcactccctactgtttgtgaggccgcatgg
ccaaaagatgtgggaatcatcgccatggaggtgtacgtgccctctcagtacgtggaccaa
acagagctggaagagtacgacggagtcggagccggaaaatacaccgtcgggctgggccag
gcgcgcatgggcttctgctcggatcgggaggacatcaactctctgtgcctgacggtggtg
cagcggttgatggaacggaacggcctgtcgtatgagagcgtggggcggctggaggtgggc
acggaaaccatcatcgataagtccaaatccaccaagaccgtcctgatgcagctcttcgaa
gagtcgggcaacactgatgtggagggagtggacacgactaacgcctgctatggaggaacc
gccgctctcttcaatgccgtcaactgggtggagtccagctcctgggacggtcgttatgct
ctggttgttgcgggtgacattgccgtttatgccacgggcagcgccaggccaacaggggga
gccggagccgtggccatgctagttggacccaacgcccctctggccttcgagagagggctt
cgtgggacacatatgcaacatgcatatgatttttacaagccagacatggtgtctgagtat
ccagtggtggacggcaagctttccattcagtgttacctcagtgctttagatcgctgctac
tccgtctacaggaacaagatccatgcccagtggcagagagagggtcttgacaaacgttgc
agtcttgaagacttcggcttcatggtgttccactctccttactgtaaactggtccagaag
tctctggctcgactaatgctcaacgatttcctctgtcatcccagtcccaacacagagagc
ggacccttcagcggactggattctttcagagatgtaaagattgaggagacgtatttcgac
agagatgtggagaaggcctttatgaaggccagttcagaactgtttgataataagacaaag
gcgtctctgcttatatcaaaccagaatgggaacatgtacacaccatcagtgtacggctgc
ttggcttcagttctcgcacaacatacaccgcagcaactggcaggacagagaatcggtgtg
ttttcatatggctcaggctttgctgctacgctctactccatcaaagtcacacaagatgct
acacctggatctgctctggataagatggtctccagcctgtgtgacttgcaggccagactg
gactctagaaagaaggtttcaccagatgtttttgctcagaacatgaagctcagagaagaa
acccatcatttagcaaactacatccctcaaggctcagtagacgaactcttcccaggaaca
tggtacctcactcgcgtggacgaaaagcatcgcaggcagtacgccaggcgctcgatgaac
gatgacagaccgctggaggccggactggtcagttccagcattgcagctgagcatattccc
agcccgctcaagaagatgccccgcatcccaactaccacagctggccctgaggtggtcatt
agcaacggggagcattaa
DBGET
integrated database retrieval system
