Labeo rohita (rohu): 127172327
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Entry
127172327 CDS
T09007
Symbol
trim37
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM37
KO
K10608
tripartite motif-containing protein 37 [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127172327 (trim37)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127172327 (trim37)
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127172327 (trim37)
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
127172327 (trim37)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MATH_2
zf-B_box
MATH
zf-C3HC4_3
HTH_1
zf-C3HC4_2
LAMB1
MRFAP1
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
127172327
NCBI-ProteinID:
XP_050977544
LinkDB
All DBs
Position
10:5479008..5506854
Genome browser
AA seq
962 aa
AA seq
DB search
MDEQSVESIAEVFRCFICMEKLRDARLCPHCSKLCCFSCIRRWLTEQRAQCPHCRAPLQL
RELVNCRWAEEVTQQLDTLQLCNLTKHEENDKDKCENHHEKLSVFCWTCKKCICHQCALW
GGMHGGHTFKPLAEIYEQHVTKVNEEVAKLRRRLMELISLVQEVEKNVEAVRGAKDERVR
EIRNAVEMMIARLDNQLKNKLITLMGQKTSLTQETELLESLLQEVEHQLRSCSKSELISK
SPEILLMFQQVHRKPMQSFVTTPVPPDFTSELVPAYDSSTFVLANFSTLRQRADPVYSPP
LQISGLCWRLKVYPDGNGVVRGNYLSVFLELSAGLPETSKYEYRVEMVHQASSDPTKNII
REFASDFEVGECWGYNRFFRLDLLASEGYLNMQTDTLVLRYQVRSPTFFQKCRDQYWYIT
QLESAQSSYIQQINNLKERLAIELFRRQKSRSSSPPDRRLCPTTSSGRDSRQGKSSVLEE
GNQAASAETKEDEDEEKTQHDDSNELSDGDLEVDCLTGDEDVNPLDGSSTSGSSTATSNT
EENDIDEETMSGENDVEYSGNLDLEEGELPDDVAGATGGSGAGARGSRRGAGASSASLLE
IDPVILIQLLDLKDRSHVESLWGMQPRPPTSLLQSQAAAVPSRKDRERRPQAVRRSAPDS
GVLIRLKAQMAEVRSKMSDVKGQLEARSGAGRISSQGASNHEQGLSMDSEMGPSRKPSEL
LFKAPVSSRHSRSGMKKAGSPKQESVGALGGLSLRRAVDAGEKELRGAGRESPVEPAPCL
REGPSSLDGSLKTRSVQSSPPSLGSSSSSSDKASGSKHEELLYGASASDLFSVTALNGAA
APATKQRRTPATGSGLLTDSSLNCDQEGAGEIHQSLLSLAEPSSSSSSRPDEGLISQKQP
HHVLPSMSSDSELDCDTENENEEEVVALEAGDCAFDTRTLPCPGEQLIPDDLSFVTGETT
ER
NT seq
2889 nt
NT seq
+upstream
nt +downstream
nt
atggatgagcagagtgttgagagtatagcggaagttttccgctgcttcatttgcatggaa
aagctgcgtgatgctcgtctctgccctcactgttccaaactgtgctgtttcagctgcata
cggcgttggctgactgaacagagagctcaatgtccccattgtcgagctccacttcagctg
agggaactggtcaactgtcgctgggcagaagaagtgactcaacaactggacacactgcag
ctctgcaatctcacaaaacatgaggagaatgataaagacaagtgtgagaaccatcatgag
aagttgagtgtgttctgctggacttgtaagaagtgcatctgtcaccagtgtgctctgtgg
ggaggcatgcatggaggtcatacgttcaaacccttggccgagatctacgagcagcatgtg
acaaaggtgaacgaggaggtggccaagctgcggcgccggctaatggagctgattagtctg
gttcaagaagtggagaagaatgttgaggcggtgcgtggggcaaaggatgagagggtgagg
gaaatccggaatgctgtggaaatgatgatcgctcggctagataatcagctcaagaacaaa
cttatcacgctcatgggacagaagacctctctgacacaggagacagaactgctggagtct
ctgctgcaggaagtggaacatcagctgcgttcgtgcagtaagagcgagctgatctctaag
agtccagagatcctgctcatgttccagcaggttcacaggaaaccaatgcagtcttttgtc
accacccctgtcccaccagacttcaccagtgagctggtccctgcctatgactcaagtact
tttgttttggcaaacttcagtactctgcggcagagagccgaccccgtctacagccccccg
ctccagatttcaggcctgtgctggaggttgaaggtttatccggatggcaatggcgttgtt
cgaggaaactatctctctgtttttctagagttgtcagcaggactcccagagacgtccaag
tatgaatatagggtggagatggtccatcaggcctccagtgaccccactaaaaacatcatt
cgagagtttgcatcagactttgaggtgggcgagtgctggggctataacaggttcttcagg
ttggaccttctcgccagtgagggctacttgaatatgcagactgacacacttgttctcagg
tatcaagtgcgatcacctacgttttttcagaagtgtagagatcagtattggtatataact
caactggagtcagcccagtccagctacattcaacagattaacaacctgaaagagaggtta
gctatagagctgttccgtcggcagaagtcgagaagttcctctccacctgatcggcgtctc
tgtcccacgacatcctccgggagagactcacgtcaggggaagagctccgtactagaggaa
gggaatcaggcagcctcagcagagacaaaagaagatgaggatgaagagaagacccagcat
gatgactctaatgagctgtctgacggggatctggaggtggactgtctaactggagatgaa
gatgtcaatcctctggacggtagtagcacctcagggagctccacagccaccagtaacaca
gaggagaatgacattgacgaagagaccatgtctggtgagaatgatgtggagtacagtggg
aatctagatctggaggaaggcgaattacccgacgatgttgccggggcaacaggaggttct
ggtgcaggtgctcggggttcaagacgtggggctggtgcgagctcagccagcctcctggag
atcgacccggtcatcctcatccaactactggacctaaaggaccgcagccatgtggagtca
ctgtgggggatgcagcctcgtccccctacctctctcctccagagccaagccgctgcagtg
ccatctcggaaagaccgtgagcgtcggcctcaggcggtgcgtcggtcagccccggactcg
ggggtcctgatcagactgaaggctcaaatggcagaagtgcgcagtaagatgtcagacgtg
aaagggcagctggaagctcgcagtggagccggtcggatctcctcgcagggagcttcaaac
cacgagcagggcctatccatggactcagagatggggcccagtcgcaaacccagcgaactg
ctcttcaaagcgcccgtctcatcacgacactctcgcagtggaatgaagaaggctggttct
cccaagcaggagagcgttggagctctgggtggactgtccctgcgcagagctgtggatgct
ggggagaaggagctgagaggagctggacgagagtcccctgttgaacctgctccttgtctc
agagagggaccctcctctttggatggctcgctgaaaacacgcagtgtgcagagctctcct
ccctcactgggaagcagctcctcttcctctgataaggcttctggctccaaacatgaggaa
cttctgtacggagcttcagcttcagacctgttcagcgtcacggccctcaatggagcagct
gctcctgccaccaaacagcgcaggactccagccaccgggtctggcctgctgacggatagc
tctcttaactgtgaccaagagggtgcgggcgagatccatcagtcactgctgtcactggct
gagccatcatcctcttcctcctcacgccctgatgaaggtctcatcagccagaagcagccc
caccacgtgctgccaagcatgagcagtgacagcgagctggactgtgacaccgagaacgag
aatgaggaggaagtggtggctctggaggctggagactgtgcatttgacacgagaactcta
ccctgtccaggcgagcagctgatccccgatgatctgagctttgtgactggagagaccaca
gagagatga
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