Labeo rohita (rohu): 127172467
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Entry
127172467 CDS
T09007
Name
(RefSeq) collagenase 3-like
KO
K07994
matrix metalloproteinase-13 (collagenase 3) [EC:3.4.24.-]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127172467
Peptidases and inhibitors [BR:
lroh01002
]
Metallo peptidases
Family M10
127172467
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GFIT
Motif
Pfam:
Peptidase_M10
Hemopexin
PG_binding_1
Reprolysin_3
Astacin
DUF4953
Reprolysin_5
Motif
Other DBs
NCBI-GeneID:
127172467
NCBI-ProteinID:
XP_050977699
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Position
10:2914406..2918003
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AA seq
493 aa
AA seq
DB search
MSRGTLNMGIQQQLCFLASLLLVIQAAPTPPPSDKDKAIAKDYLRNFYNLKRLSNSASFS
PGSSNDTTSERLKEMQKFFGLEVTGKLNKETLDVMKMPRCGVPDVAAYTTFGGSPRWETN
KLTYRIVNYTPDMTRAQVDDSIARALQVWAEVSPLRFTRIIRGTADIMISFAVRDHGDGL
AFDGPKKTLAHAFAPGSGIGGDAHFDDDESFTFRSSRGHVLFLVAAHELGHSLGLFHSNV
PGALMFPTYTFTDPDRSPLTSDDIEGIQSLYGSPRPQPLQPQPLQPQPLERQPERSPPQD
CQNLVWDAVTSFKGETVFFKDSFFWRSSSSSSAVARQINSFWSRAPDNVDAAYEDPAQDK
LFLFKGTQVWAFKGQNLEPGYPKPLSSFGLPASVTKVDAAVHNQHTGKTLLFSDKYYYRY
DERKNQIDEGYPRRVEDAFVGLSGEVTAAHMTNNNIYLFSGKNLFEFSSKNAKLLRLLTS
DFFQVCKSASLKH
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaggaactctcaacatggggattcaacagcagctgtgttttcttgcaagcctg
ttgcttgttattcaagctgcaccgactccaccgccatctgacaaagataaagccattgca
aaggattacctgagaaacttctacaatctgaaacgcttgtcaaactctgcctcttttagc
ccaggatcaagcaatgataccacgtccgagaggctgaaagagatgcagaagtttttcggg
cttgaggtgactggaaagctgaacaaagaaacactggacgtgatgaagatgccccgctgt
ggagttccagatgttgccgcgtacaccacatttggaggctcacccagatgggagaccaac
aagctcacctacagaatcgtcaactacacacctgacatgacaagagcgcaagtggatgat
tccatagcgagagccctgcaggtctgggccgaagtctctccactgagattcacccgtatc
atcaggggcacagctgacatcatgatctcctttgctgtaagagatcatggtgatggtctg
gcgtttgatggaccaaaaaagactttggctcatgcctttgctcccggttctggaatcggt
ggagatgcacatttcgatgatgatgaatctttcacattccgctcatctagaggtcatgtc
ctgttcttggtggccgcccatgagttaggtcactctttgggtctctttcattccaacgtt
cctggtgctctgatgtttcctacatacacctttactgatccggatcgttcccctctgact
tctgatgacattgaagggattcagtcactctatggttcaccacgaccacaaccactacaa
ccacaaccactacaacctcaaccactagaacgacaaccggaacgatcaccaccacaagat
tgtcaaaatctggtctgggatgcagtgacgagttttaagggagaaactgtgttcttcaag
gacagctttttctggcgtagttcttcaagcagtagtgcagtggcacgtcagatcaacagt
ttttggtccagagctcctgataatgtagatgctgcttatgaggatccagcgcaagataag
cttttcctattcaaaggtacacaagtgtgggctttcaaaggccaaaatcttgagcctggc
tatcctaaacctctcagcagctttggtctcccagcatctgtgacaaaagttgatgctgcc
gtccacaaccagcacacaggaaaaacactgctgttctctgacaaatattactatcgttat
gatgagaggaagaatcagatagatgaagggtatcccagacgagtggaagatgcatttgta
gggttgagtggagaggttacagcagcccacatgaccaacaataacatttatctcttcagt
gggaaaaatttgtttgagttcagctccaaaaacgcaaagctccttcgtttgctgacgagc
gatttcttccaggtctgtaagtcagcttccctgaagcattga
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