Labeo rohita (rohu): 127172987
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Entry
127172987 CDS
T09007
Symbol
iars1
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
127172987 (iars1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lroh01007
]
127172987 (iars1)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lroh03016
]
127172987 (iars1)
Enzymes [BR:
lroh01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
127172987 (iars1)
Amino acid related enzymes [BR:
lroh01007
]
Aminoacyl-tRNA synthetase
Class I (U)
127172987 (iars1)
Transfer RNA biogenesis [BR:
lroh03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
127172987 (iars1)
Prokaryotic type
Other AARSs
127172987 (iars1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
tRNA-synt_1e
PriX
Motif
Other DBs
NCBI-GeneID:
127172987
NCBI-ProteinID:
XP_050978525
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All DBs
Position
11:10841176..10936351
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AA seq
1266 aa
AA seq
DB search
MVEAVPESIQFPKEEERILQFWQEKDCFQECLKQSKNRPRYTFYDGPPFATGLPHYGHIL
AGTIKDIVTRFAHQNGFHVDRRFGWDCHGLPVEYEIDKSLDIKGPEDVAKMGIAEYNKQC
RNIVMRYANEWETSVRRMGRWIDFKNDYKTLYPWFMETVWWVFKQLYDTGLVYRGVKVMP
FSTACNTPLSNFEANQNYKDVQDPSVIVTFPLLEDEAVSFIAWTTTPWTLPSNLALCVSP
DFIYVKVKDNSSQKVYIMMEARLVALFKSDSEYTILDKFPGKTLKGKKYKPLFEYFIKCK
ESGAFSVVVDNYVRDDDGTGVVHQAPYFGADDYRICMDYKIIQKDSAPICPVDPSGVFTA
EVTHFAGQYVKDADKNIIKWLKENGRLVSSSSFKHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVEKLLDNNSKCYWVPEFVREKRFGNWLRDARDWAISRNRYWGTPIPLWVSDDYEEVVC
VGSMAELEELTGAKVSDLHRESIDGLTIPSRCGKGQLKRVSEVFDCWFESGSMPYAQVHY
PFENRREFEDAFPADFIAEGIDQTRGWFYTLLVLSTALFGKPPFKNVIVNGLVLASDGQK
MSKRKKNYPDPSLIVQNYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVFLPWYNAY
RFLVQNVQRLQKEEAIEFLYNERTASVSDNIMDKWIQSFTQSLIQFFRDEMGAYRLYTVV
PKLVKFVDMLTNWYVRTNRRRLKGESGTEDCVRALETLFSVLFSMCRLMAPFTPFITELM
YQNLRHLIDPASVEEKDTESIHYLMLPHARESLIDKRIESAVSQMQSVIELGRVIRDRKT
LPVKYPLKEVVVIHQDPEALRDIQSLQKYILEELNVRQLTLSTDKDKYGIRLRAEPDHMV
LGKRLKGAFKSVTASIKELKSEELENFQKTGSIVVDGHELHEDDLRLMYTFDQTSGTPSQ
YEAHSDAQVLVLLDVTPDQSMVDEGVAREVINRIQKLRKKGHLVPSDEITVYYSSQPAGE
YLDKVIQAHTDFIFATTKAPLKPYPVAKNASVIVQEKTQLKGSDLDLTIVRGAAVSRTPL
TTAACAYVNLRVMLKDKQQEGVVLLENPKGDNILDVERLKTVCCSVFGLNGAPVTIFNGK
TALNAQTDLMALSGKTLTVTSGSSPADVSSSDSLLCPYVNLQLVNASPAECQTGDVATLL
LMNPEGKNALQFPDLLHETAKVFGLRGRKLMLFMNEELTEELEALSLQTLNTKTLYVKVL
PTTAEA
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagcggtgccagaatccatccaattccccaaagaggaggagcgaatcctgcag
ttctggcaggagaaggattgtttccaggagtgtctgaaacaaagcaagaaccggcctagg
tacacgttctatgatgggccgccctttgccaccggcctgcctcactatggccacatcctg
gctggaaccattaaggacattgtgacgaggtttgctcatcagaatggctttcatgtggac
aggaggttcggctgggactgtcacggtctgcctgtggaatatgagattgataaatcacta
gatatcaaaggacctgaggatgtggctaagatgggcatagcggaatacaacaagcagtgc
aggaacatcgtcatgagatatgctaatgagtgggagacatctgtgagacgaatgggccgc
tggattgacttcaaaaacgactataagacgctgtacccgtggttcatggagaccgtatgg
tgggtgtttaagcagctgtatgatacaggtctggtctacagaggggtaaaagtcatgccg
ttctccaccgcctgcaacacgccgctgtccaacttcgaggccaatcagaactacaaggat
gtgcaggatccgtctgtgatcgtgaccttccctctgctggaggacgaggcggtgagcttt
atcgcctggaccaccactccatggaccctgcccagcaacctggccctttgcgtcagcccc
gacttcatctacgtcaaggtcaaagataacagctcgcagaaggtttacattatgatggag
gccagactcgtcgctctcttcaaatctgactctgaatacaccattctggacaaatttcct
ggcaaaaccttgaagggcaaaaaatacaagcctctgtttgagtacttcatcaagtgtaag
gagagtggtgcgttctcggtggtggtggataactatgtgcgtgatgatgacggtacggga
gtggtccatcaggccccctactttggagctgatgattaccgcatctgcatggactataaa
atcatccagaaagactcggctcccatctgccccgtggacccgtctggcgtcttcactgca
gaggtcactcacttcgctgggcagtacgtgaaggatgcagacaaaaacattatcaaatgg
ctgaaggaaaatgggcgtctggtgagctccagctcgttcaaacacagctaccctttctgc
tggaggtcggacacgccgctgatctataaagcagtgcccagctggtttgtgagggtggaa
cacatggtggagaaactattggacaacaacagcaaatgctactgggttccggagtttgtg
agggagaagcgctttggcaactggctaagggacgcacgagactgggcaatctctcgaaac
cgctactgggggacgcccatcccactgtgggtcagcgatgactatgaagaggtggtgtgt
gtgggctccatggctgagctggaggagctgactggagctaaagtttctgatcttcacagg
gagagcattgatggtctgaccatcccatctcgctgtgggaaggggcagcttaagagggtg
tctgaggtctttgactgctggttcgagagtggcagcatgccttacgctcaggtgcactac
ccgtttgagaacaggcgggagtttgaggacgccttcccggctgattttattgctgaggga
atcgaccagaccagaggatggttctacacgttactcgtgctctcaactgctctgtttggt
aaaccgccgttcaagaacgtgatcgtcaacggcctggttctggcaagcgacggacagaaa
atgagcaagcgtaagaagaattaccctgaccccagcctgattgtgcagaactatggtgcc
gacgcactccgactgtatctgatcaactcccccgtggttcgtgctgagaacctgcgcttc
aaagaagagggggtgcgagatgtactcaaagacgtcttcctgccctggtacaacgcctat
cgcttcctggtgcagaacgtccagagactgcagaaggaagaggccatcgaattcctgtac
aacgagaggacagccagcgtgagcgacaacatcatggataaatggatccagtctttcact
cagtcactcattcagttcttcagagatgagatgggagcctacagactctatacggtggtt
cccaaacttgtcaagtttgtggatatgctcaccaactggtatgtgaggacgaaccgcagg
cgactgaagggtgagagtggtactgaagactgcgtgcgtgccctggagaccctcttcagc
gtgctcttctccatgtgcagactgatggctccctttacgccgttcataacggagctgatg
taccagaacctgcgtcatctaatcgacccagcatcagtggaggagaaggacacagaaagt
atccactacctcatgctgccgcatgccagggagtctctgattgacaagcgcattgagagt
gccgtatctcagatgcagtcggtcatcgagctgggccgtgtgatccgagacagaaagacc
ctgcctgtcaagtatccactgaaggaggtggtggtgatccatcaggacccagaagctctc
agagatatccagtccctgcagaagtacatcctggaggagctgaatgttcgccagctcact
ctgtccaccgacaaggacaaatacggcattcgtctgagagctgaacctgatcacatggtg
ttgggcaagcggctgaaaggggcatttaaatctgttaccgcatccatcaaggagctgaag
agtgaagagctagagaacttccagaagacaggatccatagttgtggatggtcatgagctg
catgaagacgacctgcgcctgatgtacaccttcgatcagacctcaggaaccccatcccag
tatgaggcacattcagacgctcaggtgctggttcttcttgacgtcaccccagatcagtcc
atggtggatgaaggtgtggcccgtgaggtcatcaaccgcattcagaaattacgcaagaag
ggtcatttggtcccgtcggatgagatcaccgtgtattacagcagtcagccggcaggggaa
tacctggataaagtcatccaagcacacactgacttcatcttcgccacgactaaagctcct
ctcaagccctatccagtggccaagaatgccagtgtgattgtccaggagaaaacacagctg
aaaggctcggatctggatttaactatcgtgcgaggggccgccgtctccagaacccctctg
accaccgcagcctgcgcttacgtcaacctcagagtcatgctcaaggacaaacagcaagag
ggtgtggttctgctggagaatccaaagggtgataacatactggacgtggagcggctcaag
actgtttgctgtagtgtgtttggactcaacggtgcacctgtgaccatattcaatgggaag
acagcgctgaatgcccagactgacctaatggccctgagtgggaaaacgttgacggtgacc
tcgggttcgagtcctgcggatgtgagcagctcggattctctactgtgtccgtatgtcaat
ctgcagctcgtgaacgccagtccagcagagtgtcagactggagacgtggccacactgctc
ttaatgaacccagaggggaaaaacgccttacagttccctgatctgctgcatgaaacggct
aaagtcttcggcctgagaggaaggaaactgatgctcttcatgaatgaagagcttacagaa
gagctggaggcgttgtctctgcagactctgaatacaaagaccctctatgtgaaggttctt
cctacaacagcagaagcctaa
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