Labeo rohita (rohu): 127173370
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Entry
127173370 CDS
T09007
Symbol
gli2b
Name
(RefSeq) zinc finger protein GLI2b
KO
K16798
zinc finger protein GLI2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04340
Hedgehog signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
127173370 (gli2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127173370 (gli2b)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 GLI-like
127173370 (gli2b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-C2H2_15
zf-C2H2
zf-H2C2_2
FOXP-CC
Zap1_zf1
zf-C2H2_4
BBP7
Motif
Other DBs
NCBI-GeneID:
127173370
NCBI-ProteinID:
XP_050979168
LinkDB
All DBs
Position
11:complement(13678037..13786793)
Genome browser
AA seq
1432 aa
AA seq
DB search
MEASVPTTEKKDCKTSSLDGNSFSELPKKPSPSSLARGPHHIFPTFHSPIPIDVRHHEGR
YHYEPHALHALHGPAGLAGSPVISDISLIRLSPGAAGESSFLPPHSYVSPHVEHYLRSAH
GSPTLSMISAARGLSPADVAHEHLKERGLFGLPPPPPGATPADYYHLMTGHRNPYGELLM
QGAGAAAAAAHLPEYFTPVDVSRFPSPRLTPRLSRKRALSISPLSDASIDLQTMIRTSPN
SLVAYINNSRSSSAASSSYGHLSVGGLSPSFPFPHSINPVAYQQLLSQQRGLSAFGHTPP
LIQPSPTFTSRHPLSLSALQTPSANDTETKNTNGDSAVSSTVNPLNNKRSKVKTELDGPR
PVSPCSPDHLGGAVDLKEDLDDCKQEAEVVYETNCHWEGCSKEYDTQEQLVHHINNEHIH
GEKKEFVCRWEECSREQKPFKAQYMLVVHMRRHTGEKPHKCTFEGCSKAYSRLENLKTHL
RSHTGEKPYVCEHEGCNKAFSNASDRAKHQNRTHSNEKPYVCKIPGCTKRYTDPSSLRKH
VKTVHGPEAHVTKKQRGDLPSRPHPPKENGENEAGTKLSGRTTEEKLEANSTTRGVEDYL
QVKSIKTENSMMYQSSPGGQSSCSSEPSPLGSAAHHDGGVEPTGFSGGSMGDLSALDDVP
LVDSTVSTGMLGLHLRKNASTAHRLTYLKQEKLKSVRDSCSWANPTPPAPSTKLPPINTG
SLLEGSGGLCDPGLSISSPRLGDLCPGETTVLSQLVERRDSLASTVSSAYTLSRRSSGIS
PCYSSRRSSQASQPGGRLNNISSADSYDPISTDLSRRSSEASQCGGIPSLLSLTPAQHYR
LKAKYAAATGGAPPTPLPNMDFMSLKTRMALLGDSHEMATLPIHPPSVPRRCSDTSYANR
SVLPHEVTGNTARRASDPVRRVAAEQHSLQQRYNSMSNVNPYHSLHPPAFSRHSSNSLSE
GNINRHLYPPRPPSISENVAMETMASDMDNQNNGLDDAVMLPDDVVQYLTSQNGDSVQHP
GAGYRHHPGQSIHNFGSHYQRRLALVEGNMNAVTRQTAAPSSQQTFPSSPSDTKSQMPVQ
WNEVSSGTVDSSHCQTKQGSGRGNLTALQQKQSLSPFQNVNSNQQVGLMSHNLAHAAQQS
HVQRNSELNSQRINQRQPLRPSNTDQANFLHGYHQGSASNDISVGLLSPSGKALTAQPGS
VQNNRVRAQPVAGQSNAAFPNNQGNYSQMSINQQGYGIPAQNPTLNGNHGLLQPRPPTEP
KPYSRQLSGPTTTAAQHLGYPQSNFSPTYDTSEASPKKSADVNSSGMFYTGQIHMFNSSS
LGMAGAESAAMATVGSPETNQVSSTVDSNRAEHPQIDFDAMLDDGDHSSLVSGTLSPTLL
RSLSQNSSRLTTPRNSVTLPPVPAGIGNMAIGDMSSMLTALAEESKFLNMMS
NT seq
4299 nt
NT seq
+upstream
nt +downstream
nt
atggaggccagcgttcccaccaccgagaagaaggactgtaagacgtcttctctggatgga
aacagcttcagcgagctgcccaaaaaaccttccccatcatccctggccagaggccctcat
cacatcttcccgactttccattctccgatccccatcgacgtgcgtcaccacgaggggaga
taccactacgaaccccatgcgctccacgctctgcacggtcctgcaggtttagcgggcagt
ccggtgatttctgacatctctctgatccgtctgtctccgggagccgccggcgagtccagc
ttcctcccgccgcactcctacgtctcgccgcacgtggagcattaccttcgctcggcgcac
ggcagcccgacgctctccatgatctcagcggcgcgaggattgagtccagccgacgtggct
cacgagcacctgaaggagcgaggtttgttcggtctgcctcctccgcctcccggcgcgacc
ccggcggactattaccacctgatgacgggccacaggaacccctacggagagctgctgatg
cagggggccggagccgccgcggccgccgctcacctgcccgaatacttcacaccggtggac
gtgtcacggtttcccagtcctcgtctgacgccgcgcctgagtcgtaagcgagccctgtcc
atctctccgctctcagacgccagtatcgacctgcagaccatgatccgcacctcacccaac
tctctggtggcctacatcaacaactcgcgctccagctcggccgccagcagctcctacggg
cacctgtccgtcggaggcctcagtccatcgttcccgttcccacactccattaatccggtg
gcgtatcagcagctgttgtcccagcagagaggcctcagtgcgttcggacacacgccgccg
ctcatacaaccgtcgcccacgttcaccagcagacacccgctgagcctctccgccctgcag
acgccctccgccaacgacaccgagaccaagaacacaaatggagactctgcagtcagcagc
acagtaaaccccctgaacaacaagaggtcaaaggtcaagacagagctggacgggccacga
cctgtgtcgccttgctctccggaccatctgggcggcgcagtggacctgaaggaggacttg
gacgactgcaagcaggaggctgaggtggtgtacgagaccaactgccactgggagggctgc
agcaaagagtacgacacgcaggaacagctggtgcatcacatcaataacgaacacatccac
ggggagaagaaggagttcgtgtgccgctgggaggagtgttcgcgcgagcagaagcccttt
aaagcgcagtacatgctggtggttcatatgcgcagacacaccggggagaaaccgcacaag
tgcacttttgagggctgctctaaggcatactcgcgtctggagaatctgaaaacacacctg
cgctcacacaccggagagaaaccctacgtgtgcgagcatgagggctgcaacaaggccttc
tccaacgcctcggaccgagccaaacaccagaaccgcacacactccaacgagaaaccctac
gtgtgtaagatcccgggctgcacgaagcgctacaccgatcccagctcgctccggaaacac
gtcaaaaccgtccacgggcccgaagctcacgtcaccaagaaacaacgcggcgacttgcca
tcccgacctcatccgcccaaggaaaacggagagaacgaagcgggaaccaagctgtcgggc
cgaacgacggaggagaaactcgaagccaacagcacgactagaggagtcgaggactaccta
caagtcaagtccataaagactgaaaactctatgatgtatcagtccagccctggtggtcag
tcatcatgtagcagcgagccgtcaccacttggcagtgccgcccaccatgacggtggagta
gagccgacgggatttagcgggggcagcatgggagatctgagcgccctggacgacgtgccc
ctcgtggattccaccgtctccacagggatgttgggcctccatcttcggaagaacgctagc
actgctcatagactcacgtacctgaagcaggaaaagctgaagtcggtgagggactcgtgc
tcctgggcaaacccaactcctcctgcccccagcaccaagcttccacccatcaataccggt
tctttattggaaggttcaggcggtctgtgtgatccagggctttccatctccagcccacgc
ctgggcgacctttgtcccggggagacaacagttctgagtcagctagtggagcgtcgtgat
agcctagccagcaccgtgagctcagcttacaccctcagccgtcgttcatctggaatctcg
ccttgctattccagccgccggtccagccaagcctctcaaccgggtggccgtcttaacaac
atcagctcggccgactcctacgaccccatttccaccgatttgtctagaaggtccagcgag
gccagccaatgtggaggaatccccagtctactcagtctgactcctgcccaacactacaga
ctcaaagccaagtatgctgctgccactggaggcgctccacccactcctcttcctaacatg
gactttatgagcctgaagactcggatggccctgttaggggattcccatgaaatggccact
ctccctatccatcctccttcagttcccagaaggtgtagtgacaccagctatgctaaccgt
agcgtcttgcctcatgaggtgacgggaaacaccgctcgaagagcgagcgacccagttaga
agagtagctgcggagcagcattccctgcagcaacgttacaacagcatgtccaacgtgaac
ccctatcactcattacaccctcctgcattcagtcgacactcaagcaacagcctgtctgag
ggtaacataaaccgccacctgtatccaccccgacctcctagcatttctgagaacgtggcg
atggaaaccatggcgagcgacatggacaatcagaacaacggtcttgatgatgcagtgatg
ttgcctgatgatgtcgttcagtaccttacatctcaaaatggagattctgtccaacatcca
ggggcagggtaccggcaccaccctggacagagcatccacaactttggctcccattaccag
agacgcctagccttggtggagggcaacatgaatgccgtaacacggcaaactgcagctccg
agctcccagcagacatttccaagttcccccagtgacactaagagccagatgccggtgcag
tggaatgaggtcagttcagggacagtggattcatcccactgccaaaccaagcagggatca
gggcggggaaacctcaccgcactccaacaaaaacaaagcctcagcccctttcagaatgtc
aactccaaccaacaagttgggctgatgagtcacaacctcgctcacgctgcccagcagagt
cacgtgcaacggaatagcgagctgaattcccagaggattaaccagaggcaaccactacgc
ccatctaacacagatcaggctaactttctgcacggttaccatcagggttctgcttcaaat
gacatcagtgtaggtttgctgagtccgtctggtaaagcgctgacggcacagcctgggagc
gtccagaataacagggtacgagctcaaccggtggctggtcaaagcaatgctgcttttcca
aataatcaaggaaattattcccagatgagcatcaaccagcaaggttatggcattccggcc
cagaatcccacgctgaacggaaaccacggactgctacagccaaggccgcccacagaaccc
aaaccatacagtcggcagctctcagggccaacgacaactgcagcgcagcacctcggttac
ccgcaatccaactttagccccacatatgacacctccgaggccagtcccaaaaaatcagct
gacgtgaacagcagcggcatgttctacactgggcagattcacatgttcaattcaagcagt
ctgggaatggcaggcgcagagagtgcagccatggccaccgtgggctcccctgaaacaaat
caagtctccagcacagtggattcaaacagagcagagcatccgcagatcgacttcgacgcc
atgctggatgatggcgatcactccagcctcgtgtccggaacgttaagcccgactctcctc
cgcagcctatcccaaaattcctcccgtctcaccacgcccaggaactcagtgacgttgcct
ccggtccctgccggaatcggcaacatggccatcggagacatgagctccatgctgacggcg
ctcgcagaggagagcaagttccttaatatgatgtcatag
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