Labeo rohita (rohu): 127174500
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Entry
127174500 CDS
T09007
Symbol
lgi1b
Name
(RefSeq) leucine-rich glioma-inactivated protein 1b
KO
K25428
leucine-rich repeat LGI family member 1
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
127174500 (lgi1b)
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Gene cluster
GFIT
Motif
Pfam:
EPTP
LRR_8
LRR_4
LRR_5
LRR_1
LRRCT
LRR_9
LRRCT_2
LRR_14
Motif
Other DBs
NCBI-GeneID:
127174500
NCBI-ProteinID:
XP_050980917
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Position
12:complement(26571099..26580318)
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AA seq
543 aa
AA seq
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MGYANRSIRGYTFLLWVATLLLLVESRRGKQPKCPPGCTCTKDNALCENVRSVPHSFPPD
VVSLSFVKSGFTEIAGGSFLHTPSLQLLLFTANSFDFINEDAFQGLPHLEYLFIENNKIE
SISPHAFRGLKSLIHLSLAYNNLETLPKDIFKGMDALTKVDLRGNMFNCDCKLKWLVEWM
YSTNATVDQLYCSGPPPYQGKKINDLVPQSFDCITAEFALKKTLAFESISVEAFTFGNDQ
YVVYAQPFSGKCSFMEWDHVNMEFRAYETIESTSTVVCKPMVIDNQLFIVVAQLFGGSHI
YKRDNSANKFIKIQDIDILKIRKPNDIETFRVDGEFFFVIADSSKAGSTTVYKWNGNGFY
SHQSLHPWYRDTDVEYVDIAGKPHLILSSSSQRPVIYQWSKSQKQFDWRTDIPEMEDVYA
VKHFKVKGELFICLTRFIGDSKVMKWDGSMFTEIQTMPSRGSMVFQPVSIGNWQYAILGS
DYSLTQVYQWDTKKGQFVHFQELNVQAPRAFSLVSIDNREFLLASSFKGKTQIYEHLMID
LSS
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atgggatatgcaaacaggagcataaggggatacactttcctgctctgggttgccacacta
ctgctgttagtggagagcagaagaggcaaacagcctaaatgcccccctggatgcacatgc
accaaagataacgccttgtgtgaaaatgtgagatctgtgccacacagcttcccacccgat
gtcgtctcactatcatttgtgaagtctgggttcactgagattgcagggggaagctttctc
cacacgccatcccttcagcttctattgtttacagccaattctttcgactttatcaacgaa
gatgctttccaaggcctgccgcatctggaatatctatttattgaaaacaacaaaatcgag
tccatttcgcctcatgcctttagaggtttgaaatctctcattcacctgagtcttgcctac
aataatcttgagacgctgcccaaagatattttcaaaggaatggatgccttaacaaaagtg
gatctcagaggaaacatgttcaattgtgactgtaagttgaagtggctggtggaatggatg
tacagcactaatgcaacggtggatcagttatactgcagcgggcctccaccctatcaaggg
aagaaaataaatgacctggtgcctcagtcttttgactgcattacagcagagtttgcttta
aagaaaacccttgcatttgaatccatatctgttgaggcctttacattcgggaatgatcag
tatgtcgtatacgcccagcctttttctggaaaatgcagctttatggaatgggatcacgtc
aacatggagttcagagcatatgagaccatagagagcacttccacagtagtgtgtaagcca
atggtcatcgataaccagcttttcatcgtagtcgcccaacttttcggcggctcgcacatc
tacaaaagagacaactctgccaataaattcatcaaaatccaggacatcgacattctgaaa
atcagaaagcccaacgacatcgagactttccgtgtggacggcgagttcttctttgtgata
gcggacagctcgaaggccggctccaccacggtgtacaagtggaacggtaacggcttctac
tctcaccagtctctccatccgtggtaccgtgacacagacgtcgagtatgtggacattgca
ggcaaacctcaccttattttgtctagcagctcgcagaggcccgttatctaccagtggagc
aaaagccagaagcagtttgactggcggacggacattccagagatggaggacgtctacgcc
gtcaagcacttcaaggtgaagggggagctgtttatctgtctgacgcgcttcatcggcgac
tccaaggtgatgaagtgggacggctctatgttcacagagatacagacaatgccctcgcgg
ggatccatggtcttccagcccgtctccatcggcaactggcagtacgccatcctaggcagc
gactactcgctaacccaggtctatcagtgggacaccaagaaaggccagttcgtgcacttc
caggagctcaacgtccaggcgccaagggcattctcgctggtgtccattgacaaccgagag
ttcctgctggcgtccagctttaaagggaagacgcagatttacgagcacttgatgatcgac
ctaagcagttag
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