Labeo rohita (rohu): 127174949
Help
Entry
127174949 CDS
T09007
Symbol
c9orf72
Name
(RefSeq) guanine nucleotide exchange factor C9orf72 homolog
KO
K23609
guanine nucleotide exchange protein C9orf72
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04140
Autophagy - animal
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
127174949 (c9orf72)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127174949 (c9orf72)
Membrane trafficking [BR:
lroh04131
]
Autophagy
Other autophagy associated proteins
Rab associated proteins
127174949 (c9orf72)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
C9orf72-like
Motif
Other DBs
NCBI-GeneID:
127174949
NCBI-ProteinID:
XP_050981615
LinkDB
All DBs
Position
13:complement(12657959..12667501)
Genome browser
AA seq
462 aa
AA seq
DB search
MSAAGPPQSPGVAKTEVLVEDWCPVLAATFAYWDNILGPRVQHIWAPKGQGLSLLSDGEV
TFLANHTLNGEILRSAESGAVDVKFFVLAEKGVIIVSLIFDGELKGDKNTCALSIILPQS
ELSFYLPLHSVCVERLKHIIRKGRICMQKGYNIIYVLSSEIVPIMELLTSMKKHSVPEEV
DLKDTVLNDDDIGDSCHEDFLHKAISSHLQTCGCSMVVGSNPEKVNKIVLTLCLFLTPAE
RKCSRLCHPDGSFKYDTGLFVQGLLKDSTGSFVLPYRQVLYSPYPTTHIDVDINTVKQMP
PCHEHTYHQRRYMRAELSALWKAASEDDISSDNLINAQDSFTPDLNIFQDVMHKDTLVKS
FIDEVFLLKPGLSLRSVYLSHFLLLLHRKALTLLRYIEDETQKGKKPFRSLRNLKTDLDL
MVEGDLNIIMAMAEKLRAGLHSFVFGKSFLTSVQERDLLINF
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcagccggtcccccacagtctcctggtgtggcgaagactgaagtgctggttgag
gactggtgtcccgtgctagctgcaaccttcgcttactgggacaacatcctgggacctcgt
gtacagcacatttgggcccccaaaggtcaggggctgtcgctcctcagtgatggagaggtc
acgtttctggccaatcacacgctgaacggcgagattttgagaagtgcggagagtggcgca
gtggacgtgaagttcttcgtcttggcagaaaagggagtcatcatagtctcgctgattttt
gacggagaactcaagggtgataagaacacttgcgcgctgtcaatcatcctgccgcagtca
gagctaagcttttacctgccactgcacagcgtgtgtgtggagagactcaaacacatcatt
cgcaagggacgcatctgcatgcagaagggttacaacataatctatgtgttgtcatctgag
attgttcccataatggagcttcttacttctatgaagaaacacagtgtgccagaggaagtg
gatctaaaggacactgtgctcaatgatgatgatattggagacagctgtcatgaagacttt
ttacacaaggctatcagctctcatcttcagacttgcggctgttcaatggtggttggcagc
aatcctgagaaagtcaataagatcgtgctcacgctgtgcctcttcctcactcctgctgag
agaaagtgctctcgactgtgtcaccccgacggctcttttaaatatgacaccggcctgttt
gttcaaggcctccttaaggactccacaggcagctttgtgttgccctaccgacaggtactc
tactccccgtaccccaccacccacattgacgtggatattaacacggtgaagcagatgcca
ccctgccacgagcacacgtatcatcagcggcgctacatgcgagctgagctcagtgccctc
tggaaggccgccagcgaggatgacatcagttctgacaacctcatcaatgcccaggactct
ttcaccccagacttgaatatatttcaggacgtgatgcacaaagacacacttgtgaagtcc
ttcatagatgaggtgtttcttttgaaaccaggtctgtctctgcggagtgtgtatttgtcc
cacttccttctcctgctgcacaggaaggccctgacactgctcagatatattgaggatgag
acgcagaagggcaaaaaacctttcagatctctacgcaacctgaaaaccgatttggactta
atggtggagggtgacttgaatatcattatggcgatggcggagaagctgcgggcaggcctt
cactcctttgtttttgggaagtctttccttaccagtgtgcaggaacgtgacctcctcatt
aacttctga
DBGET
integrated database retrieval system
