Labeo rohita (rohu): 127175981
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Entry
127175981 CDS
T09007
Symbol
kdrl
Name
(RefSeq) vascular endothelial growth factor receptor kdr-like isoform X1
KO
K05096
FMS-like tyrosine kinase 1 [EC:
2.7.10.1
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04510
Focal adhesion
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127175981 (kdrl)
04020 Calcium signaling pathway
127175981 (kdrl)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127175981 (kdrl)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lroh01001
]
127175981 (kdrl)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127175981 (kdrl)
Protein kinases [BR:
lroh01001
]
Receptor tyrosine kinases (RTK)
VEGFR family [OT]
127175981 (kdrl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
VEGFR-1-like_5th
Ig_3
I-set
Pkinase
ig
Ig_2
V-set
VEGFR-2_TMD
VEGFR-1-like_Ig-like
VEGFR1-3_N_Ig-like
Ig_6
Herpes_gE_N
C2-set_2
C1-set
Haspin_kinase
Motif
Other DBs
NCBI-GeneID:
127175981
NCBI-ProteinID:
XP_050983318
LinkDB
All DBs
Position
14:complement(9087595..9135972)
Genome browser
AA seq
1305 aa
AA seq
DB search
MSPVQTSIKGVITVQLLLNVFSSGLVEGSRLPDPQLFPARDTHLKHVGGTLTLICRGSTS
LHWSLANRNVSSVLIEPCVERMHKNCSKLVVHNLTHTDTGFYTCSHQKSNSRNVSTYVFV
KDRNHPFVEEHRVAQPLYAYRNDPFLVVPCRTTSPNQLVTLETMGNTMEDHVRSSMDWDP
KRGFNFSLGPYDSYHMITCMTSVNGKQFSSNYFLLRLAVELKNIGIKPERPKVLVGDTLV
LNCSAETSYNGRIDFKWEFHKARINRTQTVELTRAKHGDIVVMSNTLIFHNVTMKDKGTY
GCTASLEARKLNISTEVTVFEHPFLNVTHNKRKFISAIEGRKVHFEPRVNALPAPDRVLW
YKDGVAIKENSTCYETAGYNLTIKQVRQKDAGIFTIALSNQEKGLYRNLSYRLEVRVKPK
IFEEDMTPGGPQTYKYNEEHQLTCTAFGIPVPNITWFWQPCDPSSNLTECKHYTDPLPIG
DITESHNHYPHNRINDVSTRVELLKSKNKTKSILTVEAANVSGIYFCTAKNEIGNHTKRI
PFYVYDQTQPLEIGPSTAVAGDDVTLTCKGTRYLHDMLNWYDPLGHRVPKGKTTLQIDPY
TISLSIKFPNVSRNHTLGYECQALNVASNKVVNATSLLTINERQRPMLKQNLTNQDVNSS
STLTLDCFAEGVPEPHIKWYKDKTPVIEGPGITLKDGQLIIARVKKDDEGIYECRASNDG
GEAKTSAVITVVGEDGKPNIEVIILVSTGAAATFLWIMLILFIRKLRKPSSADLKTGYLS
IIMDPDQMPLDEQCDRLPYDSNKWEFPRDRLRLGKTLGHGAFGKVVEASAFGIDKISTCK
TVAVKMLKAGATNNEWRALMSELKILIHIGHHLNVVNLLGACTKHGGPLMIIVEYCKYGN
LSNYLRSRRGDFVVYKSQDGKALRSSSGCDLSELIKRRLESVASTGSSASSGFIEDKSYC
DEEEEEEQEDLYKKVLTLEDLICYSFQVAKGMEFLASRKCIHRDLAARNILLSENNVVKI
CDFGLARDIYKDPDYVRKGDARLPLKWMAPEAIFDKIYTTQSDVWSFGVLMWEIFSLGAS
PYPGLHIDEEFCCRLKEGTRMKAPEYSSSEIYQTMLDCWHGEPSKRPMFTELVERLGDLL
QASVQQEGKHYIPINTALLTKADPSDLTSKEKSSSRPVSLRDSGTAWKLKIRPASVKTFD
EVIMENGTNKNHEGGQSDSGIGLSSDDLKTLKRLESLARPRSFTSRAMKSRSKESVLLEG
EKEKYPLLVSSLDLSLEDSSLDPELECHSPPPDYNYVVRYSTPPV
NT seq
3918 nt
NT seq
+upstream
nt +downstream
nt
atgagtcctgttcaaacctcaatcaaaggcgtcatcactgtccagctgcttcttaacgtc
ttctcaagtgggctggtagagggatctcgtctgcctgatccacagctgtttcctgctaga
gacacacaccttaagcatgttggtggcacactcacactcatctgcagaggatcgacttcc
ctgcactggagcctggctaacagaaatgtgtcatcggtactgattgagccgtgtgtggag
agaatgcacaagaattgcagcaagctggtcgtacacaacctgacccacaccgacacaggc
ttctacacatgcagtcaccaaaagtctaacagtcgtaatgtgtccacatatgtttttgtt
aaagatcgcaatcatccgtttgtggaggaacacagagtagcacaaccgctttatgcatat
cggaatgatccttttttagtggtgccatgcagaacaacgtccccgaatcaacttgttacc
cttgagactatgggtaatactatggaagatcatgtaagaagtagcatggattgggatcca
aagagaggtttcaatttttccttgggaccttatgacagctaccacatgattacgtgtatg
accagtgtgaatggcaaacaattttcatcaaactactttctcttaaggctagcggttgag
ctgaaaaacattggcatcaaaccagaacgaccaaaagtactggtcggtgacaccctagtc
ctcaactgctctgcagagacctcttacaacggcagaattgactttaaatgggagttccat
aaggctcggatcaatcgcactcaaacagtggaactgactagggcaaaacatggtgacatc
gttgtgatgagtaacacattaatctttcataatgtgacaatgaaggacaagggaacatat
gggtgcactgcatcactcgaagcgaggaagcttaatatttcaactgaagtcactgtattc
gagcatccattcctcaatgtgacccataataaacgtaaattcatctctgctatagagggt
agaaaagtgcattttgagccacgggtcaatgccttgcctgcaccagatagagtgttgtgg
tacaaagacggagttgccattaaagaaaattccacatgttatgagaccgccggctacaac
ctcaccataaaacaagtgaggcagaaggatgctgggatcttcactatagctctgtcaaac
caggagaaaggtctctacagaaacctcagctacagattggaagtcagagtgaagccaaag
atctttgaggaggacatgactccagggggcccacaaacttacaaatataatgaggagcac
cagctcacctgcactgcatttgggattcctgtgccaaacattacctggttttggcagccg
tgtgaccccagctctaatcttacagagtgcaaacattacactgatcctcttcctattgga
gacatcactgaatcacacaaccattatcctcataatcggattaatgatgtcagcaccagg
gttgaattattaaaaagcaaaaacaagactaaaagcattctgacggtggaagcagctaat
gtgtcagggatctacttctgtacagcaaagaatgaaattggcaaccataccaagagaatc
cctttctatgtgtatgaccagacacagccgcttgagatcgggccctcgacagctgttgca
ggagatgatgttacactgacctgcaaaggcacaagatacctccacgatatgttgaattgg
tatgatccactgggccacagagtgcccaaaggcaaaaccactcttcagatcgacccctac
accatatctttgtctatcaagttccccaatgtctctagaaaccacacgctgggctatgaa
tgccaggctttaaacgtcgcttccaataaggtggtcaatgcaacatctcttttgactatt
aatgagaggcaaaggcccatgctgaagcagaatctgaccaatcaggatgtgaacagcagc
agcaccctaactctggactgctttgctgagggtgtgcctgaaccccatatcaaatggtac
aaagacaaaactcctgtcatagagggaccaggtatcactctgaaagatggccaactgatc
attgcgagggtgaagaaggatgacgagggcatttatgaatgtcgtgccagcaatgatgga
ggggaagcaaaaacaagtgcagtcattactgtagtaggagaagacggtaaaccaaatatt
gaggtgatcatcttagtgtctacgggagcagcagcaacgtttctttggataatgctcatt
ctcttcattcgtaaattaagaaagccaagttcggcagatttaaagacggggtacctgtcc
atcatcatggatcccgaccagatgccccttgatgagcagtgtgatcgtctgccctatgac
agcaacaaatgggagttccccagagaccgtctcagactcggtaaaactttgggacatgga
gcatttggaaaagttgtagaggcctctgcatttggcatagacaagatttctacttgcaaa
acggtggcggtgaaaatgctgaaagcgggagctacaaataacgagtggagagctttgatg
tctgaactgaagattctaatccatattggtcatcatctcaacgtagtcaatcttctagga
gcctgcacaaagcatggaggtccgctaatgataattgtggaatactgcaaatatggaaac
ctttccaactacttgagaagcaggaggggtgactttgtggtttataagtctcaggatggc
aaggctctgcgttccagctccgggtgtgatctgagcgagctcatcaagcgcaggttggag
agcgtggccagcaccggaagttcagccagctccggcttcattgaagataagagctactgc
gacgaggaagaggaggaagagcaagaggatttgtataagaaagtgctcacactagaagac
ttgatttgctacagctttcaagtggctaaaggcatggagttcttggcttcaagaaaatgt
attcaccgcgatctggccgcacgtaacatcctgttgtctgaaaacaacgttgtgaagatt
tgcgatttcggacttgcaagagatatatacaaggacccggactatgtccgcaaaggagac
gccagacttcccttgaagtggatggctccagaggcaatatttgacaagatctataccact
cagagtgacgtgtggtcatttggagtgcttatgtgggagatcttctctcttggtgcctcc
ccttaccctggcttacacattgatgaggaattctgctgccgactgaaggagggcactagg
atgaaagctcctgaatactcctcctctgaaatatatcaaactatgttggactgctggcat
ggagaaccatccaagagacctatgttcacagagctggtagagaggcttggagatctgcta
caagctagtgtgcagcaggagggaaagcactacatccccatcaacacggccctgttgacc
aaagcagacccctcagacctaacctccaaagagaagagctccagcagacctgtctctctt
agagactctgggacggcttggaaactaaagatccgcccagcgagtgtgaagacctttgat
gaagtaatcatggagaatggaaccaacaagaaccatgagggagggcagtcagacagtgga
ataggtctatcttcagatgacctgaagacactgaagcgtctggagtcactggccagaccc
cggagtttcacgtcccgagcgatgaagagcagaagtaaggagtcagttctgctagagggc
gagaaggagaaatacccactgcttgtttcctcactggacttgagtctggaggactcctcc
ctcgacccagagctggaatgtcatagcccacctccagactataactacgtggtccgttac
tccacaccacccgtctga
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integrated database retrieval system
