Labeo rohita (rohu): 127175987
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Entry
127175987 CDS
T09007
Symbol
gria2b
Name
(RefSeq) glutamate receptor 2b isoform X1
KO
K05198
glutamate receptor 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04080
Neuroactive ligand-receptor interaction
lroh04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
127175987 (gria2b)
04082 Neuroactive ligand signaling
127175987 (gria2b)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127175987 (gria2b)
Ion channels [BR:
lroh04040
]
Ligand-gated channels
Glutamate (ionotropic)
127175987 (gria2b)
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
127175987
NCBI-ProteinID:
XP_050983330
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Position
14:10867986..10906923
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AA seq
897 aa
AA seq
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MQQFKNLSICLISLLCGVTIGGSPSVQIGGLFPRGADQEYSAFRIGMVQFGTAEFRLTPH
IDNLEVANSFAVTNCFCSQFSRGVYAIFGFYDKKSVNTITSFCGTLHVSFITPSFPLDGN
QQFIIQMRPDIKGPLLSLIEYYKWDKFAYLYDSDRGLTTLQVVLDTAAEKKWQVTAINVG
NMKDERKDEAYRSLFQDLENKKERRVILDCEQDKVKDIMEQVITIGRHVKGYHYIIANLG
FVDGDLSKIQYGGANVSGFQIVDFDDPLVSKFDQRWEALEEKEYPGADSKIRYTSALTYD
AVQVMTEAFRYLHKQRIDISRRANNGDCLANPAVPWAQGVEIERALKQVRVDGLTGNIQF
DQYGKRVNYTVNVMELKSNGPVKIGYWNEVDKMVVTKSDLFPNDTMGLENKTVIVTTILE
APYVMLKKNADLFVDNERYEGYCVDLAAEIAKHCGFKYQLKIVGDGKYGARDAETKIWNG
MVGELVYGKADIAVAPLTITLVREEVIDFSKPFMSLGISIMIKKPQKSKPGVFSFLDPLA
YEIWMCIVFAYIGVSVVLFLVSRFSPYEWHTEEYEDGQIQTNESTNEFGIFNSLWFSLGA
FMRQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESAEDLAKQT
EIAYGTLDSGSTKEFFRRSKIALFDKMWTYMKSAEPSVFVKTTAEGVMRVRKSKGKYAYL
LESTMNEYIEQRKPCDTMKVGGNLDSKGYGIATPKGSSLRNAVNLAVLKLNEQGLLDKLK
NKWWYDKGECGSGGGDSKEKTSALSLSNVAGVFYILVGGLGLAMLVALVEFCYKSRAEAK
RMKVTFSDAMRSKARLSITGSTGENGRVMSPEFPKAVHAVPFVRPGVGMNVSLTDLS
NT seq
2694 nt
NT seq
+upstream
nt +downstream
nt
atgcaacagtttaagaatttatcgatttgtctcatttctcttttatgtggggtgacaatt
ggagggtctccaagtgttcaaattgggggcttgtttccgaggggagctgatcaggagtac
agcgcgtttcggatcggaatggttcagttcggaacggctgaatttagactgacgcctcac
atcgacaatctggaagtagcaaacagtttcgctgtaactaactgcttctgttctcagttc
tcaagaggagtttatgctatttttggattttacgacaagaagtcagtaaacacaataacg
tcgttctgcgggacacttcatgtctctttcatcacaccaagctttcccttggacggaaat
cagcagttcatcattcagatgcgaccagacatcaaaggacccctcctaagtctcattgag
tactacaaatgggataagtttgcctacctgtacgacagtgaccgaggacttaccacactc
caagttgtgctggacacagcagcagagaagaaatggcaggtgaccgccatcaatgtggga
aacatgaaggacgagagaaaggatgaagcgtatcgctcactctttcaggacctagaaaac
aaaaaggagcggagggtcatccttgactgcgagcaagacaaagttaaagacatcatggaa
caggtcataactattggcaggcatgtgaaaggatatcactacatcatagcaaacttgggt
tttgtcgacggagatctttcaaaaatccaatatggtggagccaatgtgtcaggctttcag
attgtggatttcgatgaccccctggtgtctaaatttgaccagcgctgggaagccctggag
gaaaaagaatatccaggagcggacagcaagatacggtacacctcagcactgacatatgat
gcagttcaggtcatgactgaggccttccgttacctgcacaaacagcgaattgacatctcc
cgtagagctaacaacggagactgtctggccaatcctgctgtaccatgggcacaaggggtg
gagatagagcgtgccctaaaacaggtcagagttgatggtctcactggtaacattcagttt
gaccagtacggaaagagggtgaattacaccgtcaatgtcatggaactgaaaagcaacgga
ccagttaagattggctattggaatgaagttgataagatggttgtgacaaagtctgatctc
ttcccaaatgatacaatggggctggaaaacaagactgtgatcgtcaccactattctagaa
gcaccgtatgtaatgctaaagaagaatgctgaccttttcgtggataatgaaagatatgag
gggtactgtgtggacttggcagctgaaatagcaaaacactgtggattcaaatatcagctg
aaaatagtaggagatggcaaatatggagctagagatgcagaaacgaagatctggaatgga
atggttggagagttggtttatgggaaagctgacatagcagtggctccattgactatcact
ttagtcagagaagaagtcatcgacttctcaaagccattcatgagtttgggcatctccatc
atgatcaagaagcctcagaaatccaagcctggtgttttctcatttctggatcctctggcc
tatgagatctggatgtgtatcgtgtttgcctacatcggtgtaagcgtagtgctttttctg
gtcagtcgtttcagcccatacgagtggcacacagaggaatatgaagacggccagatacag
accaacgagtccaccaatgagtttgggattttcaacagcctttggttctctcttggagct
tttatgagacagggctgtgatatttcaccaaggtctctttctggccgcatagttggagga
gtctggtggtttttcaccctgatcataatttcatcctacacggctaacttggctgccttc
ctaacagtggagaggatggtgtctccaatcgaaagtgcagaggacttagcaaagcaaaca
gagattgcttacggaactttagattctggttcaacaaaagagtttttcaggcgttccaaa
atcgctcttttcgacaaaatgtggacgtacatgaaaagcgcggagccctccgtgtttgtt
aagacgacagcagaaggtgttatgcgggtgaggaagtccaaggggaagtacgcatacctg
ctggagtccaccatgaacgagtacatcgagcagcgcaagccctgtgacactatgaaggtc
ggagggaacctggactccaaaggctacggcatcgccacccccaaaggatcctcattaaga
aatgcggttaacctcgcagtactaaaactgaatgaacaaggcctgttggacaaattgaaa
aacaaatggtggtacgacaagggagagtgcggcagcgggggaggtgattccaaggagaag
accagcgctctcagcctgagcaatgtggctggggtcttctacatcctagtgggcggcttg
ggcttggccatgctggtggccctggtcgagttctgttacaagtcccgagccgaggccaag
cgcatgaaggtgaccttttcggacgccatgaggagcaaagcgagactgtctattactggg
agtactggcgagaatggacgtgtgatgagtcctgagttccccaaagcagtacatgcggtg
ccctttgttagacctggtgtgggaatgaacgtcagtctgactgatctctcctga
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