Labeo rohita (rohu): 127176082
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Entry
127176082 CDS
T09007
Name
(RefSeq) E3 ubiquitin-protein ligase XIAP-like isoform X1
KO
K04725
E3 ubiquitin-protein ligase XIAP [EC:
2.3.2.27
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04120
Ubiquitin mediated proteolysis
lroh04210
Apoptosis
lroh04217
Necroptosis
lroh04510
Focal adhesion
lroh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
127176082
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
127176082
04217 Necroptosis
127176082
09144 Cellular community - eukaryotes
04510 Focal adhesion
127176082
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127176082
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lroh01002
]
127176082
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
lroh04121
]
127176082
03029 Mitochondrial biogenesis [BR:
lroh03029
]
127176082
Enzymes [BR:
lroh01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
127176082
Peptidases and inhibitors [BR:
lroh01002
]
Peptidase inhibitors
Family I32: IAP family
127176082
Ubiquitin system [BR:
lroh04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
127176082
Mitochondrial biogenesis [BR:
lroh03029
]
Mitochondrial quality control factors
Mitochondrial dynamics
Retention of mitochondria
127176082
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BIR
zf-C3HC4_3
Prok-RING_4
UBA_BIRC2-3
RNA_pol_N
Motif
Other DBs
NCBI-GeneID:
127176082
NCBI-ProteinID:
XP_050983486
LinkDB
All DBs
Position
14:6109700..6117114
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AA seq
452 aa
AA seq
DB search
MAYSSQDGEIEADGAWSSMPNRVNSFRRFPRTEEFPAERLARAGFYFTGQADRVRCFSCH
ATVEDWNRGDTPLKRHQQASPNCRFLSCAHGVRSPNFIESPAYDEEAEAREFQLRTGAVE
DLSLYPTVPHMKSEEARLNSFTNWPADVPVQPEDLAAAGMYYIGPNDCVKCFCCGGLLAG
WEPGDDAWGEHAKHYPNCFFILGHDVGNVPLPTPRPRVNGQRASVETFEGRLESFRGRQH
PIDPERLARAGFYSTGEQDHVLCFRCGGGMKEWMPDEDPWEEHARNYPGCRFVLAEKGEE
YINSVQLRYPNRDHSRSSQNGFSSHENVAQKVLQSEIAQKAVGMGFDPIKVEQTILQKLR
QNTEGYTSVEALIQDLSELESESTIPEKADDPMTKLEKLQREKLCKVCMDSDINIVFIPC
GHLVTCQKCSEPLNKCPICCAAITQKIKTYNA
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcgtactcaagtcaagatggtgaaattgaagctgatggtgcatggtcatccatgcct
aatcgtgtgaattccttcagacgcttcccccgtactgaagaatttccagctgagcgattg
gcccgggcaggcttttattttacaggtcaggcagacagggtgcgttgtttcagctgccat
gcgacagtggaagactggaatagaggggatactccactgaagagacatcagcaagcatct
cccaactgcaggttcctcagctgtgctcacggtgtgagaagccccaacttcattgaaagc
cctgcttacgacgaagaggccgaggccagggagttccagctccgcacaggagcggtggag
gatctgtccctttatcccactgtgccacacatgaagagtgaagaagctcggctgaattct
ttcaccaattggcctgcagatgttccagttcaacctgaagacctggcagcagcagggatg
tattacataggaccaaatgactgtgtgaagtgcttctgttgtggggggctgctggcagga
tgggagccaggcgacgatgcctggggtgaacatgcaaagcactacccaaactgcttcttc
atcttgggccacgatgtaggcaatgtgccactgcctacacctagacccagggtgaatggt
cagagagcctctgtggagacttttgaggggcgtcttgaaagcttcagaggcagacaacat
cccatagaccctgagagactagccagagctggtttctacagcacaggagaacaggaccat
gtgctctgcttcagatgtggaggaggaatgaaggagtggatgcctgatgaagacccttgg
gaggagcatgccaggaactatccaggctgtcgtttcgttctggcagaaaaaggagaagaa
tatatcaacagcgtgcagctgagatatccaaatagagaccattcaagatcaagtcagaat
ggcttttcaagtcatgagaatgtagcacagaaagtcctgcagtcagaaattgcacaaaag
gcagtaggtatgggttttgaccccatcaaagtggagcaaaccattctgcagaaattacgt
cagaacactgagggttatacttcagtagaggcccttattcaagacctcagtgaactggag
agtgagagtactatacccgagaaagctgatgaccccatgacgaaacttgagaaactccag
agggagaaactctgtaaagtctgcatggacagtgacattaacatcgtcttcattccgtgc
ggacacctggtcacctgtcagaaatgctcagaacccctgaacaagtgtcccatctgctgt
gccgccatcacacagaagatcaagacctacaatgcctaa
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