Labeo rohita (rohu): 127176102
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Entry
127176102 CDS
T09007
Symbol
pdgfrb
Name
(RefSeq) platelet-derived growth factor receptor beta
KO
K05089
platelet-derived growth factor receptor beta [EC:
2.7.10.1
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04020
Calcium signaling pathway
lroh04510
Focal adhesion
lroh04540
Gap junction
lroh04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127176102 (pdgfrb)
04020 Calcium signaling pathway
127176102 (pdgfrb)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
127176102 (pdgfrb)
04540 Gap junction
127176102 (pdgfrb)
09142 Cell motility
04810 Regulation of actin cytoskeleton
127176102 (pdgfrb)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lroh01001
]
127176102 (pdgfrb)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lroh04090
]
127176102 (pdgfrb)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127176102 (pdgfrb)
Protein kinases [BR:
lroh01001
]
Receptor tyrosine kinases (RTK)
PDGFR family [OT]
127176102 (pdgfrb)
CD molecules [BR:
lroh04090
]
Proteins
127176102 (pdgfrb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
Pkinase
Ig_3
I-set
Ig_2
ig
V-set
C2-set_2
VEGFR-1-like_Ig-like
RIFIN
PKD
Adeno_E3_CR2
Motif
Other DBs
NCBI-GeneID:
127176102
NCBI-ProteinID:
XP_050983515
LinkDB
All DBs
Position
14:complement(26597593..26674558)
Genome browser
AA seq
1069 aa
AA seq
DB search
MKSFSQSQLTAMTTGLLLLCLGSSALELSPSNPQVILPINSSYNITCSGWSDITWRFKRE
EKVPEFHIEKRSPSSSVLSLQRVTWRHTGVYVCTENGTNETREVTVFVPDPEVWFLENDH
LMVTKTREEGTVPCLVTNPSIKVTLYEKDSEFMVDGSYNPSVGYTAALEDRTYKCKGELN
GEEKESVPFYVFSILAPEALDPYINASKTVLKQGETLNVNCTVNGAELVYFSWDFPNKDV
GDIEPLTDVLSSMSMRSCLNITDVSLARSGLYVCHVHEGVEDQKASASINITVLEKGFVA
LSSHLDRNVSAQLGENVELKVEIEAYPKPTIQWMKDGAAIKGHNTRQDYETRFVSTLTLV
RIRLEQMGLYTVSVKNEDDFKEMTFDLEVKVPPQITELSDHQLPGKKHAVTCVAEGVPSP
SIQWFSCDSMTKCSNRSVAWSPLLEDPEKITIQTNVTYNITRKIHQVHSQVTLLRPQLLT
IRCEANNEGGARARDIRLVNSTLFSQVAILAAVLALVVIAIISIIILIAVWRKKPRYEIR
WKVIESVSLDGHEYIYVDPIHLPYDLAWEMPRDSLVLGRTLGSGAFGRVVEATAYGIGRS
QSATKVAVKMLKSTARRSETQALMSELKIMSHLGPHLNIVNLLGACTKHGPLYLVTEYCR
YGDLVDYLHRNKHSFLQYYADKNHIANGSQICNDSDVPTGKEYVSFGSECDGGYMDMTKD
EQTEYVPMQELTDTIKYADIQPSPYESPYQQDIYQEQGHRVDRSLVISDSPVLSYTDLVG
FSYQVAKGMEFLASKNCVHRDLAARNVLICEGKLAKICDFGLARDIMHDNNYISKGSTFL
PLKWMAPESIFHNLYTTLSDVWSYGILLWEIFTLGGTPYPDLPMNELFYSALKRGYRMTK
PSYASDDIYEVMRKCWDEKFEKRPEFSFLVHTMGNMLSDGYKKRYGQVSDSFLKSDHPAV
ARVKPHVPSPFPSAFPPQSPASDQIPSPIPRPQAAGETADTPHNEYIIPIPDPKPDEETQ
DEPVLTEIPSSSLSSDEETVSMETPSTEPEREELLPDHSGSPEVEESFL
NT seq
3210 nt
NT seq
+upstream
nt +downstream
nt
atgaagagtttcagccagtcccaactgactgccatgacaacaggtttgctcctgctctgt
ctgggtagttcagctctggagctcagtcccagcaaccctcaggtcatcctccccatcaac
tcctcctacaacatcacctgctccggctggagtgacatcacctggcgcttcaagcgggag
gagaaagttccagagttccacatcgaaaagcggagcccctcctccagtgttctgagtctg
cagcgggtgacgtggagacacacgggcgtctatgtgtgtacggagaacgggacgaatgag
accagagaggtgaccgtctttgtgcctgatcctgaggtgtggttcctcgagaacgatcac
ctcatggtgactaagacgagagaggaaggcacggtcccctgtctggtgacgaatccctcg
ataaaagtcacgctgtacgagaaagactcagagtttatggtggatggttcgtacaacccc
agcgtgggctacaccgccgccctggaggacagaacctacaaatgcaaaggagagctgaat
ggagaggagaaagagtctgtccccttctacgtcttcagtatattagctcccgaggctctg
gatccctacatcaacgcctccaaaactgtcctgaaacagggcgagacactgaacgtcaac
tgcaccgttaacggcgcggagctcgtctacttctcctgggactttcccaacaaagatgtg
ggggacattgagcctttgactgacgtcctgtcgtccatgagcatgcggtcctgtctcaac
atcacagacgtgtctctggccagatcaggactgtatgtttgtcacgtgcatgagggtgtg
gaggaccagaaagcttcagccagtattaacatcacagtactggaaaaaggattcgtggct
ctttcttcacatctggacaggaacgtctcggcgcagcttggcgaaaacgtggagctgaaa
gtggagatcgaggcgtatcccaaacccaccatccagtggatgaaagacggcgctgctatt
aaaggacacaacaccagacaggactacgagacccggtttgtcagcacactgaccctggtg
aggatccgactggagcagatgggactctacaccgtcagtgtcaaaaacgaagatgacttt
aaagagatgacctttgacttagaggtgaaagttcctcctcagataactgaactgtctgac
catcagctgccgggtaagaagcacgcggtcacctgtgtggcggagggagtgccgtctccc
agcattcagtggttcagctgtgacagcatgaccaagtgcagtaacagaagtgtggcgtgg
agccccctactggaggatcctgagaaaatcaccatccagactaatgtcacctacaacatc
acacgcaagatccaccaggtgcacagtcaggtgactctcctgcggccgcagctgctcacc
atccgctgcgaggccaacaacgagggaggagctcgagcacgagacatcagactggtgaac
agcaccttgttttcacaggtggccattctggctgcagtcttagcgctggtggtcattgcc
atcatctccatcatcatcctcatcgctgtgtggaggaagaagccacgctatgaaatcaga
tggaaggtgattgaatcggtcagtttggatgggcacgagtacatctacgtcgaccccatt
cacctaccctatgacctggcctgggagatgccacgggacagtctggtgctgggtcggacg
ttgggatctggagcgttcgggcgtgttgttgaggccactgcgtacggtatcggccgctcc
caatctgccactaaggtggccgttaaaatgctgaaatcgacggcacggaggagcgagact
caagctctgatgtctgaactcaagatcatgagtcatctgggtcctcatctcaacattgtc
aacctgctgggcgcctgtactaaacacggtccattatatctggtgacagaatattgtcgc
tatggcgatctggttgactacctgcacaggaacaagcacagcttcctccagtactacgcc
gacaagaaccacatcgccaacggcagccagatctgtaacgacagtgatgtgccgaccggg
aaagaatacgtgtcgttcggcagcgagtgtgatggaggatacatggacatgaccaaagac
gagcagaccgaatatgtgccgatgcaggagctcacggacactatcaagtatgcagatatc
cagccgtcaccctacgagtctccttaccagcaagacatctaccaggagcaaggtcacagg
gtggatcgctctctggtcatcagtgattctccggttctgagctacactgatctggtgggt
ttcagttatcaggtggccaaaggcatggagttcctggcctcaaagaactgtgtccatcgg
gatctggcggcaagaaatgttttgatctgtgagggcaaactggccaagatctgtgacttt
ggactggccagagacatcatgcacgacaacaattacatctccaaaggcagcacgtttctt
cctctgaagtggatggcaccggagagcatctttcataacctgtacaccacgctgagcgac
gtctggtcctacggcatcttactttgggagattttcactctgggaggaaccccatatcca
gacctgccgatgaatgagctgttttacagcgctctgaagagaggataccgcatgaccaaa
ccctcatatgcctctgacgacatttatgaggtcatgaggaaatgttgggatgagaagttc
gagaagcgtccggagttctcctttctagtgcacaccatggggaacatgctgtctgacgga
tataaaaagagatacggtcaggtcagcgacagctttctgaagagcgatcaccctgcggtg
gcccgcgtgaagccgcatgtcccgtctccgttcccgagcgccttccctcctcagtctccc
gcctcggatcagatcccaagcccgatcccgcgcccgcaggccgccggagagacagctgat
actcctcacaacgagtacatcatccccatccctgatcccaaaccggacgaggagacccag
gacgagccggtgctgacggaaatcccctcgagctcgttaagttctgacgaggagacggtc
tccatggaaaccccgagcaccgaacccgagcgcgaggagctgctgccggatcattctgga
agtccagaggtggaggagagcttcctgtga
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integrated database retrieval system
