Labeo rohita (rohu): 127178597
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Entry
127178597 CDS
T09007
Symbol
tlr18
Name
(RefSeq) toll-like receptor 18
KO
K10159
toll-like receptor 2
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04145
Phagosome
lroh04620
Toll-like receptor signaling pathway
lroh05132
Salmonella infection
lroh05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
127178597 (tlr18)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
127178597 (tlr18)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
127178597 (tlr18)
09171 Infectious disease: bacterial
05132 Salmonella infection
127178597 (tlr18)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127178597 (tlr18)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lroh04147
]
127178597 (tlr18)
04054 Pattern recognition receptors [BR:
lroh04054
]
127178597 (tlr18)
04090 CD molecules [BR:
lroh04090
]
127178597 (tlr18)
00536 Glycosaminoglycan binding proteins [BR:
lroh00536
]
127178597 (tlr18)
Membrane trafficking [BR:
lroh04131
]
Endocytosis
Phagocytosis
Toll-like receptors
127178597 (tlr18)
Exosome [BR:
lroh04147
]
Exosomal proteins
Exosomal proteins of breast milk
127178597 (tlr18)
Pattern recognition receptors [BR:
lroh04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
127178597 (tlr18)
CD molecules [BR:
lroh04090
]
Proteins
127178597 (tlr18)
Glycosaminoglycan binding proteins [BR:
lroh00536
]
Hyaluronan
Cell surface receptors
127178597 (tlr18)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LRR_8
TIR
LRR_4
TIR_2
LRR_9
LRR_5
ThsB_TIR
Motif
Other DBs
NCBI-GeneID:
127178597
NCBI-ProteinID:
XP_050987524
LinkDB
All DBs
Position
16:16196500..16205668
Genome browser
AA seq
857 aa
AA seq
DB search
MFVSLALLLSLQAVVHIKPAKANQSCTITIDWRSADCKGLRLDHVPITKLPASLEELDLS
FNTIQVITKQDFFKLTHLRVLKLNFNNISLIVDDAFQGNLFLEHLNLFNNSLTEIPFKAL
EPLTNLKVLEMSNNLYTKASLDASFLNFTQLQVLSIGGSLVSSLGSCDIDVLKNISLYKF
AIKTGTGFKHYEPGYFSNLNTRNLWLDIAFDKKPDMLPMILKDLANKTFDVLRFRNIFEF
QYYSGKQDIFYGLHYVKTQHLTFYRGKFNEEVMRMTLVNLEISSIKSLELLLIDFARSQN
RTQGSSVTNLTLEKLVLSDISNPDIMRFDWSFTWLNHVRQFIVWNVNFNSVPCDSWPEMK
NIELLDISNNQLRDSYIYNPLCDTRNTLHKLDTFNVSRNRLASLSDLASLTKDFVKLTTI
DMSHNQLGNMGNRVCNWGQSITKVIAHHNSLTSDSFQCLPTSVSFLDLSYSSLDQLDMVY
FNMASNLTELLLSGNKIKFIPSGWRNPYLRTLALDGNSFGLVSMKSFKDMPSLQVLTAGN
NPYHCTCDLYTFIQETTSKGKVTITDWPDNYKCYHPERLLNTMVSQYFPGHLTCNITLVV
IISVSTTAVVVLGLMLLCYIFHVPWYMKATYQIIRAKYRAHKEGSGQALDYTFHAFISYS
HADADWVRNMLLPCLENSKPPYRLCIHERDFIPGKWIIDNIIENIENSRKVIFVLSRSFV
NSEWCNYELYFAQQRAIGKTFSDVILIVKEAIDPTSLPSKFCKLKRMLNTKTYLEWPQQP
TEQSFFWVQLRSVLGKPNNIKEHTTSQRSRLSSVRSVSLIELPQDHNSAEINGTDEDGHQ
VSDQPSNRCQQTLRELV
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgtttgtttcactggctcttcttctcagcctccaggcagtagtgcacattaaaccagct
aaagccaatcagtcctgtacaataacaatcgactggcgttcagcagactgtaaaggtcta
cgtctggaccatgtgcccataacaaaactgcctgcctctctggaagagctcgacctgtct
ttcaataccatacaggtcatcaccaaacaagattttttcaaacttactcatctgcgagtc
ctcaagcttaatttcaacaacatctctctgattgtggatgatgcctttcagggaaacctt
tttttggagcatctaaatttatttaataactctttgacagaaattccattcaaagccctt
gagccactcacaaatttgaaggttttagaaatgtctaataatttgtacacaaaagcatct
ctggatgcttcttttttgaattttacccagttacaagtgctgtccattggtggatccctg
gtcagtagtttgggaagctgtgacattgatgtgttgaagaacatctcattgtacaagttt
gctattaaaactggcactggttttaaacattatgaacctgggtatttcagcaacctcaac
acaagaaacttgtggctcgatatagcttttgacaaaaaaccagatatgcttcccatgata
ctgaaagatctggcaaacaagacttttgatgtgctacgtttccgaaacattttcgaattt
cagtactattctggtaaacaggatattttttatggcctgcactatgtaaagactcaacac
ttaaccttctatcgaggtaaattcaatgaggaagttatgagaatgactctggtcaatttg
gaaatcagttcaatcaaaagcctggaactgctgctcatcgattttgctcgttctcagaat
agaacacagggttccagtgtgacgaacttgaccttggaaaagctggtgctctcggacatc
agtaatccagatataatgcgcttcgactggagcttcacctggcttaatcatgtccgccaa
ttcattgtatggaacgtgaacttcaacagcgtgccgtgcgactcgtggccggagatgaaa
aacattgagcttctggacatttctaacaaccagctgagagacagttatatttacaacccg
ctatgtgacactagaaacacactgcacaagcttgacacctttaacgttagccgtaatcga
cttgccagcctcagtgacttggcatctctgaccaaagactttgtcaagctgaccacaatt
gatatgagccacaaccaactgggaaatatgggaaatcgtgtctgtaactggggacagtcc
attaccaaagtaatcgctcatcataatagtctgacgagtgacagttttcagtgccttccc
acttctgtaagcttcctcgatctttcatacagcagcctagaccaacttgacatggtctat
tttaatatggcatccaacctcactgagctcctcctcagtggcaacaagatcaagttcatc
ccttccggctggaggaatccatacttgaggacactggctttagatggaaactcctttgga
cttgttagcatgaagtctttcaaggacatgcctagcctacaagtcctgaccgcaggcaac
aacccttatcactgcacctgtgatctctacacttttatacaggaaaccacaagcaagggc
aaggtcaccatcacagactggccagacaactacaagtgttaccatcccgagcgtctcctc
aacacaatggtatcgcaatacttccctggtcatttaacttgtaatattacactcgttgtc
atcatctctgtgtcaacaacggcagttgtagtccttggtctcatgcttctgtgctacatt
tttcatgtgccatggtacatgaaagctacataccagatcatcagagccaagtacagggcc
cataaagaaggttcaggtcaagctttggactacacctttcatgctttcatctcttacagc
cacgcagatgcagattgggttcgaaacatgctgcttccttgtctagagaattcaaagcct
ccttatcgcctctgcatccatgaaagagacttcattccagggaagtggatcattgacaac
atcattgagaacattgaaaatagtcggaaggtgatcttcgtgttgtcgcggagcttcgtg
aacagcgagtggtgcaactacgagctctacttcgcccaacaacgggccattggcaagaca
ttcagtgatgtcatcctgatcgtgaaggaggccatcgatcccacttctcttcccagtaaa
ttctgtaagctcaagaggatgctcaacaccaaaacctacctagagtggccccagcaaccc
acagaacagagctttttctgggtccagctaaggagtgtcctgggcaaaccaaacaatata
aaagagcatacgaccagccagcgtagccgcctgtcttcagtgaggtctgtttccctgatt
gaactgccacaggaccataattctgcagaaattaatggtacagatgaagatggccaccaa
gtcagtgatcagccatctaatagatgtcaacaaacgttaagagaacttgtttga
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