Labeo rohita (rohu): 127178753
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Entry
127178753 CDS
T09007
Symbol
znf407
Name
(RefSeq) zinc finger protein 407 isoform X1
KO
K26729
Zinc finger protein 407
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127178753 (znf407)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
127178753 (znf407)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-H2C2_2
zf-C2H2_4
zf-C2H2
zf-H2C2_5
zf-C2H2_16
zf-met
zf-C2H2_jaz
zf-C2H2_2
zf-C2H2_15
C2H2-zf_KIN17
DUF7963
Motif
Other DBs
NCBI-GeneID:
127178753
NCBI-ProteinID:
XP_050987796
LinkDB
All DBs
Position
16:32843975..32892095
Genome browser
AA seq
1526 aa
AA seq
DB search
MDNPKRKLRSGREISKDKGQPKKKANETGTEDVLPALKSVKVSDDSGHKNIIKESKQTGT
LTVEDQSRNIQSKERGFPETTDDLACSFCNFVAKTQTALKIHSTRKHSHKKGLQNDTVSD
TVIAPGLNPLQNTPQLQESENRTHLSELQLDSTTVSLSEEDKQSDTCMVQTEGEQTHQLL
VEEAVISEKVVDTSEDGRTSPTQMLLEIVEPPSCRCQDGEDINETFKDGDDMQAGCSFHL
ESKVKSNKNGGIDGHAENHASQKYSKLNTLHSCSYCVHKVIDGHSPDTHIKRQHNKKQNN
ACDFCSYSCVTKCDHEKHCMSNNHNRKLLENRDQELVFPPLTPMTRPTESKAQHQCDRCT
FTANNSVMLAQHIKTHHPVEHRFHCRACHYYTTTIEAMEVHLSEEVHQQVAKEKNISPIF
KDCVEKILVILSDLREEGDMNESDTREQCSKEAEEVQEMENVLPEPAGAVRKGSPHKRKR
GRPKTSNVTVCSHCGLVASNATNLSVHIRRRHSRLYSFVCKLCNYYCVTKGDMDRHCETK
KHINKMQAAGSEGSGVVLLDAEQPIQAKKNEAELGDKVSVIETTIDEVDKNNSTVPCKKS
KYDLSNICTQCDFVAHSTPSLALHVRRKHTKDFEFVCLACSYYTVTRREMFRHMATEKHK
QKRECYLKKQNQSFNNGQADLTDMTTKSTFEDPETIAGSEVVRDSSTLTSSSTTTTDEEN
SAKVGEENCANEDGAKQSAVKNTSKDNEESSTNPAESNVSDMVQSLTMVKDAMLEDMDEE
NVFDDDEMTDLGDDSPSTEKHLRAIQFDACIFSLKTLAERKQTSHDEEQTTGALNQQSMK
KPKTPVVPETKTTKPMPRIRCEDCGFLADGLSGLNVHISMKHPSKEKHFHCLLCGKSFYT
ESNLQQHLSSAAHVRNEHGSIEDLPEGGASFKCVRCSEPCQTEQELFVHIKEKHEELLRE
VNKYVLEDTEQINRERQENQGNVCKYCGKVCKSSNSMAFLAHIRTHTGSKPFMCKICNFA
TAQLGDARNHVKRHLGMREYKCHICGWAFVMKKHLNTHLLGKHGLGQPKERKFECELCER
SFSEKWALNNHMKLHTGDKPYKCAWPSCHYAFLTLSAMKDHHRTHTGEKSFLCDLCGFAG
GTRHALTKHRRQHTGERPFKCQLCNFASTTQSHLTRHKRVHTGEKPYRCPWCDYRSNCAE
NIRKHILHTGKHEGVKMYNCPKCSYATNAPMDFRNHLKETHPDIENPDLAYLHAGIVSKS
FECRLKGQGASFVQAESVFTPDESELGSEAVQQVIIIQGYSGGEVAIDHALEESAAATLQ
TLAMSSQLAEVLHITEDGQLITSGREVSTVTGGQTTQYVLVESSGETVEDARQEGEEAVH
SVSESSSALDALLCAVTELGQQGGPREGEITTTTVSEHMPEENCEGQTSQTQRQSEGQVY
EERAEVGVVAQVMSSTHEHPSEEMQEVLQFAASQLMMKEGLTQVIVNDEGTHYIVTQLDD
STLHVEGTVEDPSGEEAIVYSEINPE
NT seq
4581 nt
NT seq
+upstream
nt +downstream
nt
atggacaatccaaaacgaaaattgagatctggaagggagatttcaaaggacaagggtcaa
cctaagaaaaaggccaacgaaactggtacagaagatgttttgcctgcacttaaaagtgtt
aaagtttctgatgattcaggacataaaaatattataaaagaaagtaaacaaactgggaca
cttacagtggaggaccaatccagaaacatacagtctaaagaacgtggctttccagaaaca
actgatgatttggcttgttcattttgcaattttgttgcaaaaactcaaactgcactgaaa
attcactcaacaaggaaacactctcataaaaaaggcttacaaaacgacacagtctctgac
acagttattgcaccagggttaaatccattgcagaacacaccacaattgcaagaaagtgaa
aaccgaacacatctttcagagttgcaactggacagtactacagtgtctctgtcagaggaa
gacaaacaatcagatacctgcatggttcaaacagagggtgaacaaacacatcagctcctt
gtagaagaggctgtaatatcggagaaggttgttgatacttctgaggatggaagaaccagt
cccactcagatgttgctggaaatagttgagcccccttcatgtagatgtcaggatggggaa
gacataaatgagacctttaaagatggtgatgatatgcaagcaggctgcagttttcatttg
gaaagtaaagtgaaaagcaataaaaatggtggcattgatggacatgctgagaatcatgca
agtcaaaagtattcaaagctgaatactctacattcgtgttcctattgtgtacataaagtc
atagatggacacagtccagacacgcatattaagaggcaacataataaaaaacaaaataac
gcttgcgatttctgtagctattcttgcgttacaaagtgtgatcatgagaagcactgcatg
agcaataaccacaaccgaaagttgctggagaatcgtgatcaagaattagttttcccacct
ttgacaccgatgacacgtccgaccgaaagcaaggcacagcatcagtgcgataggtgcacc
ttcacagccaacaactctgtaatgttagcacagcacattaaaacgcaccatccagtggag
caccgttttcactgcagggcctgccattattacaccaccactatagaggccatggaggtt
catctgtcagaagaagtacaccaacaggtggccaaagagaaaaacattagccctattttt
aaagactgtgttgaaaaaatccttgtgattctgtcagatctaagggaggaaggagacatg
aatgagagtgacactcgtgagcagtgctctaaagaagctgaggaggttcaggaaatggaa
aatgtactaccagagccagctggagctgtaaggaaaggttctcctcacaaacgtaagcga
ggcagaccaaagacttctaatgtgactgtttgtagtcactgtgggctcgttgcttccaat
gccaccaacctcagtgtccatatacgacgcaggcacagtcggttatacagcttcgtttgt
aagctgtgcaactattactgtgtgaccaagggtgacatggaccgccactgtgaaactaaa
aaacacatcaacaaaatgcaagcagccggaagtgaaggcagtggggtagttctgctagat
gctgagcagccaattcaagcaaagaaaaatgaagcagaactgggtgacaaagtatcagta
attgagacaactattgatgaagtggacaaaaataactccaccgtaccatgcaagaaaagc
aagtatgacttgagtaatatctgcactcagtgtgactttgttgctcactcaactccgtct
cttgctctccatgtgcgacgcaaacacacaaaagactttgagtttgtttgtttagcatgc
agctactacactgtaacccgtagagagatgtttagacacatggcaacagaaaaacacaag
cagaaacgtgagtgttacttgaaaaaacagaaccaaagctttaataatggtcaggctgac
cttactgatatgaccaccaaatccacctttgaagacccagagacaatcgcaggatcagaa
gtggtccgtgatagttctactttgacatcttcaagcaccacaactacagatgaagagaat
tctgcaaaagtaggtgaagagaattgcgcaaatgaagatggagcaaaacagtctgctgta
aagaatacttccaaagacaatgaagaatcctcaactaatccagctgaatcaaatgtgtct
gacatggtccagtcattgacgatggtaaaagatgcaatgctggaggatatggatgaggaa
aatgtgtttgatgatgatgaaatgactgatttgggagatgacagtccttctactgagaaa
caccttagagcgatacagtttgatgcctgcatcttttccttaaaaacattagctgagcgt
aagcagacatcacatgatgaagaacaaactacaggtgcattaaaccagcagagcatgaaa
aagccaaaaacaccagttgtacctgagacaaagactaccaaaccaatgccccgtatccgc
tgtgaggactgtggttttttggcagatggcttaagtggactaaatgttcatatctccatg
aagcatccatcaaaggaaaagcatttccattgcttgctctgtggaaagtccttctacaca
gagagtaacctacagcagcacttaagcagtgcggcacatgtgcgcaacgagcatggaagc
attgaagaccttccagaaggaggcgctagctttaaatgcgtccgatgcagtgagccctgc
caaactgagcaggaactatttgtgcatatcaaagaaaaacatgaagaactgctgagagaa
gtgaacaaatatgtgctggaggacacagagcagatcaaccgagagcgacaggaaaaccag
ggcaatgtgtgcaagtactgtggcaaagtatgcaagagcagcaactccatggcttttctg
gctcacattcgcacacacacaggatctaagccgtttatgtgcaaaatatgtaactttgcc
accgctcagctcggtgatgcccgaaaccacgttaagagacatctaggcatgagggagtac
aagtgtcacatctgtggatgggcatttgtaatgaagaaacatctcaacactcatctgctg
ggaaagcatggactgggccagcccaaagagagaaagtttgagtgtgagctgtgtgaacgg
agcttcagtgagaaatgggcactgaataaccacatgaagctgcacacaggagacaaacca
tacaagtgtgcatggccctcatgtcattatgccttcctgactctctctgctatgaaggac
catcacaggacacacacaggagagaagtctttcctgtgtgatctctgcggatttgctggt
ggcactcgtcatgccctgaccaaacatcgtcgacaacacacaggtgaacgacccttcaag
tgtcagctgtgcaattttgcctcaaccacacagtcccacctgacgcgccacaaacgtgtg
catacaggcgagaagccctatcgctgcccctggtgtgactacagatctaattgtgcggag
aatatccgaaaacacatcctgcacacagggaagcatgagggggtgaagatgtacaactgt
cccaagtgcagctatgccaccaatgccccgatggacttcagaaatcatctcaaagagact
caccctgacattgagaacccagacctggcttaccttcatgcaggaatcgtgtccaagtcc
ttcgagtgtcgtctaaagggacagggggcatcctttgtccaggcagagtccgtattcacc
cctgatgagagtgaactgggttctgaggctgttcagcaggtcattatcattcagggctac
agcgggggagaggtggccatcgatcatgccctggaggagtcggctgctgccactttacag
accctcgctatgtctagtcagctggccgaagtgctacacatcactgaggatggacagctc
atcacatctggtcgggaagtgtctacagtgacaggagggcagaccactcagtacgtgctg
gtggagtcttccggagagaccgtagaagatgcaagacaggaaggggaggaggctgtgcac
agcgtgtccgagtcttcctctgctctggatgctttgctttgtgccgtgacggagttgggc
caacaaggcggccctagagagggagagattaccaccactacagtgtcagaacatatgcca
gaagagaattgtgaaggccagacctctcagacacagagacagagcgaaggacaggtatat
gaggagagggcagaagtgggtgtggtggctcaggtaatgagctctacccatgagcaccca
tctgaggaaatgcaagaggtgctacagtttgctgccagtcagctgatgatgaaggagggt
cttactcaagttatcgtcaatgacgaggggacacattacatagtcacacagctggatgac
tctaccctgcatgttgagggcactgtagaggatccatccggagaggaggcgatagtttac
tcggaaattaatccagaatga
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integrated database retrieval system
