Labeo rohita (rohu): 127180054
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Entry
127180054 CDS
T09007
Symbol
ltk
Name
(RefSeq) tyrosine-protein kinase receptor isoform X1
KO
K05119
anaplastic lymphoma kinase [EC:
2.7.10.1
]
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
lroh01001
]
127180054 (ltk)
09183 Protein families: signaling and cellular processes
04090 CD molecules [BR:
lroh04090
]
127180054 (ltk)
Enzymes [BR:
lroh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.10 Protein-tyrosine kinases
2.7.10.1 receptor protein-tyrosine kinase
127180054 (ltk)
Protein kinases [BR:
lroh01001
]
Receptor tyrosine kinases (RTK)
ALK family
127180054 (ltk)
CD molecules [BR:
lroh04090
]
Proteins
127180054 (ltk)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PK_Tyr_Ser-Thr
MAM
Pkinase
Gly_rich
Ldl_recept_a
Motif
Other DBs
NCBI-GeneID:
127180054
NCBI-ProteinID:
XP_050989914
LinkDB
All DBs
Position
17:complement(20638302..20710857)
Genome browser
AA seq
1504 aa
AA seq
DB search
MDLTRQTFLKLAFFIFTVVRSSCALLERAVEDPVHPNPLDSSPAEDSELSFCDFESPCSW
TLSNHSTGGDWYVTSPQQHRSNRWGVQPIKDYSTGKSEGHFLLLKPTSTHFAAGRCSFHM
TSPVVLSSGPLCHLRLARFQPEPHTGNISAFVKHTDHSIIKPIALTVKEQGTGRSQWEVL
EAVIGQLDEPFQVTVQYSSCSSHEVGFLAFDSLELKDCVMGDDYFDLGSDCEKYSSLHCH
SGGCIEKRRVCDFHTDCPQGEDEGLVCNDLPLGSYCSFELGSCGWSLADSQSSWRLISGQ
QLTEDTDLLGTTLQNTQGHFLFLKVRGRGDESEALVQSPALPSTISNQDCQLQFSMYLYG
DFNGTVLLSVVEKGMSASPLIWERSGHWKDAWQEITLPITEILKGFHLKVQAFWASGSKA
DIALDDISLSAACFDTELNELLLGQGLPHDLDSFSPLPEPSASEASLITWWFTSCGASGP
LGPTQAQCDSAYRNSNVSVVVGKEGPLRGVQMWRVPATNMYKISAYGAAGGKGAKNHNKR
SHGVIISAIFPLEKGDTLYILIGHQGEDACPGRNPLTHKICLGESSVIEDGFDSDGSALK
WAGGGGGGGGATYIYRMENGEPVPLLIAAGGGGKAYLEDPESSLDQIFLEQYENDTSALG
VNGKSGAAGGGGGWSDLSSLHWAGKSLVEGGQGGSSCPEALTVLGWATFGGFGGGGGACT
AGGGGGGYRGGDAPLLDGITADGQDGVSFVHPMGKIFLQPLAAMESHGEAEIEVYLNCSH
CQTQSCKRDEDTRLILCLCDSDEVLAPDNVTCLVVPLGSLAEGPPSLIFILAVIASTVVT
GVVLTCASLTLIYYRKKNHLHAVRIRLQSPEYKLSKIRSSTIMTDYNPNYCFAGKAASLS
ELKEVPRKNITLLRALGHGAFGEVYEGQVLGMNGENTAMQVAIKTLPEICSEQDEMDFLM
EALIMSKFSHQNIVRCIGVSLQILPRFILLELMTGGDMKTFLRLNRPRTNQLSSLSMLEL
LHMARDIALGCRYLEENHFIHRDIAARNCLLTCPGPERVAKIGDFGMARDIYRASYYRKG
GRAMLPVKWMPPEAFLEGIFTCKTDTWSFGVLLWEIFSLGYMPYPCKTNQEVLEFVTGGG
RMDPPKSCPGPVYRIMTQCWQHCPEHRPNFSTILERINYCTQDPDVINTPLPVEYGPPVE
EEGGTVIRPEGSSSMTPLLVAHSMSQDASPRPGITGAAPQALRPTKLQRPIHLAQEVGTY
RETLEPCWAEPAPTPGVCPGQWLQVPEHRPCSRSSSSSGSQKLKNKTKNLWNPTYGSWVL
ESFGRGKTTLCHTQSMPLSCNPTSVSVPSSTSECIDPGVEVNANVSTSPPLSAASSQTTF
SPTGTSSRKSPTGATGGSLAAVMDLAKLQSFPCGNVNYAYDEQSYETESLPVVVSKSAEP
STSSSATSSLAALGLATTFSHKPLVKRHASYGHEDVRRYTQSEKPTRDRDSGFSLSEDLS
VTPV
NT seq
4515 nt
NT seq
+upstream
nt +downstream
nt
atggatcttactcgacaaacttttttaaaacttgcttttttcatcttcacagttgtcagg
agcagttgtgctctgctggaaagagcagtagaagatccagtgcatccaaatcctctcgac
tccagtccagctgaagacagtgagctttccttctgtgattttgaatctccatgctcctgg
acgttatccaatcacagcactggaggggactggtatgtcacctcgccacagcaacacaga
tccaacagatggggtgtccaaccaatcaaagattattccaccggaaaatctgaaggtcat
tttctgttactaaaacccacctcaactcatttcgctgctggcagatgtagtttccacatg
accagtcctgtagtgctcagcagcgggccactgtgtcatcttcgccttgctcgctttcaa
ccagaaccgcatacaggaaacatatctgcctttgtgaaacacactgatcactccatcatc
aaaccaatagcacttacagtcaaagaacaaggaactggcaggtcacagtgggaggtgctg
gaggctgtgattggccagttagatgagcctttccaggtgacagtgcagtactcttcctgt
agcagccatgaagttggatttttggcatttgattcgcttgagctgaaggattgtgtcatg
ggcgatgattattttgatttgggttcagactgtgagaaatactcatcacttcactgtcat
tctggaggctgcattgaaaaacgaagagtgtgtgattttcatactgactgtccacaaggg
gaagatgagggcttagtatgcaacgacttacctttgggctcatactgttcatttgagttg
ggctcctgtggatggtcattggctgattcacagtcatcttggaggctaattagtggacaa
cagctgactgaagacacagatctactgggcacaactttgcaaaacactcaagggcacttt
cttttcttaaaggtcagaggtcgtggtgatgaaagtgaggcgctggttcaaagcccagct
ctaccttcaactatatccaatcaggactgtcagttgcagttctctatgtacctgtatggg
gatttcaatggaaccgtgctcctgtcagtggtggagaagggaatgtcagcatctccactg
atttgggaaagatccggacactggaaggacgcctggcaagagatcactctgccgattaca
gagatcctaaaaggcttccatcttaaagtgcaggccttctgggcttctggatctaaggca
gacattgcactggatgatatttcattaagtgcggcatgttttgacacagaactaaatgaa
ctgcttcttggacaaggactaccgcatgatttagactccttcagccctcttccagaaccc
tcagcgtcagaggcatctctaataacatggtggtttacgtcctgtggagcaagcggacca
ctaggcccgactcaagcccagtgtgacagtgcttaccgcaacagcaacgtcagcgtggtg
gtggggaaggagggccctctcagaggggttcagatgtggagggttccagctaccaatatg
tacaagatttcagcctatggagccgcaggaggcaaaggagcaaaaaaccataacaagcgc
tcacatggtgtcattatctcagctatcttcccacttgagaaaggtgacacactctacatc
ctaattggtcaccaaggagaagatgcctgtccaggaagaaaccccctgacccacaaaatt
tgtctcggtgagtcttctgtgatcgaagatggtttcgacagcgatggttcggctttgaag
tgggcagggggtggaggtggtggtggaggagccacatacatttatcggatggagaacggg
gaaccggtgcctttgctgattgcagcaggaggaggaggaaaggcctacctggaggaccct
gaaagcagcctggaccagattttcctggagcaatatgagaatgacacctccgcccttggc
gtcaatggcaaatccggagcagcaggtggaggaggtgggtggagcgacctgtcttctctc
cactgggcagggaaatctcttgtcgagggaggtcaaggaggctcatcctgtcctgaggcc
ttgacagtgctgggatgggctacatttggagggtttgggggcggagggggcgcttgcact
gctggaggcggtggtggaggatacagaggtggtgatgcgccccttcttgatggcatcaca
gcagatggacaagatggtgtctcttttgttcaccccatgggaaagatatttctacaacca
cttgcagcaatggagagccatggggaagctgagatcgaagtgtatctaaattgcagccac
tgtcagacccagagctgtaagagagatgaagataccagactcatcctctgcctgtgtgac
agcgacgaggttctggcaccagacaatgtcacctgcctagttgttccattgggctccctg
gctgaaggacccccatccctgatatttatcctggcggtgatcgcgtccacagtagtcacg
ggtgtcgttctgacctgtgccagcctcacgctcatctattaccggaagaagaaccacctg
catgcggtcaggattcgactgcagagcccagagtacaagcttagcaaaatccgctcgtca
accataatgactgactacaaccccaactactgcttcgctggcaaggcggcctcattgagt
gagcttaaggaggttccacgcaagaacataaccctcctcagggcattgggacacggtgcc
tttggggaagtgtatgaaggacaggttttgggtatgaatggagaaaacacagccatgcag
gttgctataaagactcttccagaaatctgttccgagcaggatgagatggatttcctaatg
gaggctctgattatgagtaagttcagccatcagaacattgtgcgctgtattggcgtcagt
ctgcagatcctgcctcgcttcatactgctggagctcatgacaggaggagatatgaagact
ttcctcagactaaaccgacccagaactaatcagctgtcttctctaagtatgctggagctt
ctgcatatggccagagacatcgcacttggatgtcgctatctagaagagaaccacttcatc
cacagggacattgcagcacgaaactgccttttgacctgtcctggtccagagagagtggct
aagattggagattttgggatggctcgagatatttacagggcaagttactataggaagggt
ggccgtgccatgttgccggtgaaatggatgccacctgaagcctttctagagggcattttc
acatgcaagactgatacctggtctttcggggtactgctgtgggagattttctctcttgga
tacatgccttatccctgcaagaccaatcaggaagtactggagtttgtaacaggtggtggt
cgtatggatcctcctaagagctgcccaggccctgtttatcgcatcatgacacagtgttgg
caacactgtccagaacacagaccaaacttctcaactattttagagaggatcaactactgt
acacaggaccctgatgtcatcaacacccctcttccagtggagtacggtccacccgtcgaa
gaagaaggtggcactgtgatccgccctgaaggatcaagcagtatgacccctcttctagtg
gctcactccatgtcccaggatgcttcccctcgaccgggcatcactggtgcagccccacag
gccctcagacctacaaaactacaaagaccaatccatctcgcgcaggaggtgggcacgtac
agagaaacactagagccgtgttgggccgagccagctcctactcctggagtctgtccagga
caatggcttcaggtcccagagcaccggccgtgctccaggagcagttcgtcatcaggcagc
cagaagctaaagaacaagactaaaaacctttggaaccccacctacggttcctgggtcctg
gagagctttggacgagggaagacgaccctgtgccacacccagtcaatgcctctgtcttgc
aaccccacatccgtgtctgtcccgtcctctacctcggagtgcattgaccctggagtagaa
gttaacgcaaatgtctcaacatccccacctttgtctgctgcatcctcccagaccacgttc
agtcctacagggacttcctcccggaagagtccaacaggagctacgggcggctcgctcgct
gcagttatggacttggcgaaactccaaagcttcccgtgtggcaacgtaaactatgcgtac
gacgagcagagctatgagactgagagtttgcctgttgttgtgtccaaatctgcggagccc
agcaccagctcttcagccacatcttcactggctgccctcggcctagctacgactttttcc
cacaaaccgctggtgaagcgccatgctagctacggacatgaggatgtaaggaggtacact
cagtctgagaagcccacgagggacagggattctggcttttccttgtctgaagacctcagt
gtcaccccagtgtag
DBGET
integrated database retrieval system
