Labeo rohita (rohu): 127180851
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Entry
127180851 CDS
T09007
Name
(RefSeq) voltage-dependent calcium channel subunit alpha-2/delta-1
KO
K04858
voltage-dependent calcium channel alpha-2/delta-1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04010
MAPK signaling pathway
lroh04260
Cardiac muscle contraction
lroh04261
Adrenergic signaling in cardiomyocytes
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
127180851
09150 Organismal Systems
09153 Circulatory system
04260 Cardiac muscle contraction
127180851
04261 Adrenergic signaling in cardiomyocytes
127180851
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lroh04040
]
127180851
Ion channels [BR:
lroh04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
127180851
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Ortholog
Paralog
GFIT
Motif
Pfam:
VGCC_alpha2
VWA_N
VWA
dCache_1
VWA_3
VWA_2
Cache_3-Cache_2
DUF2201
Motif
Other DBs
NCBI-GeneID:
127180851
NCBI-ProteinID:
XP_050991129
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All DBs
Position
18:6324989..6455032
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AA seq
1090 aa
AA seq
DB search
MMVRPRSTDLIMNPFRISVLMMFIFASVHISCPSQFPSPLMIKEWVDQLQQELVSLADTA
SAGNNLRQIFMDNQNYFTVETNNAAQLVETAARNIESFLKKRAAALETLATAAENFQMEH
QWKDEFEEDDIVYYNAKDNLEANETEGRKNRIRPEFKEDPSFKNRLTSYSHTAVHIPTDI
YDGSTIVLNELNWTEALEDVFKRNREEDPTLLWQVFGSATGLARYYPASPWMDARKTPSK
IDLYDVRRRPWYVQGAASPKDMLILVDASGSVSGLTLKLIRTSVSEMLETLSDDDYVNVV
HFNTKVNNTACFDHLVQANVRNKKILKDAVQNITAKGITNYTKGFEFAFNQLSNPNITRA
NCNKIIMLFTDGGEERAEEIFSRYNIDRKVRVFTFSVGQHNYDTGPIKWMACANKGYFYE
IPSIGAIRINTQEYLDVLGRPMVLADAKQVQWTNVYLDALELGLVITGTLPVFNKTKSRE
GGSRNQHQNQLILGVMGVDVSLDDIKRLTPRFTIGPNGYYFAIDPNGYVLLHPNLQPKNP
KFQEPVTLDFLDAELENDIKVQIRTLMIDRDPGEKTIETLVKSQDERYIDRGIRTYTWAP
VNGTDYSLALVLPEYSLHYIEANLGDTIKQAMSFETMQQEKFEEYGYTFIAPREYCKDLK
VSSNNTQFLQDFSDYIDRKTPNDPMCNVTLVNRLLLDAGLTADLVKVWKEQSVDGVLARF
VATDGGITRVYPKSAGEEWGENSETYDSSFYKRSLDNDIYIFTAPYVNKSRESGYESGIL
VSKAVDLDIDGAKLKPAVVGVKLNVSAWMNSFINATTKKNCKDEICGCLRNDKQVDCVIL
DDGGFLLMSNQDEYITQIGQFFGEVDPVLMITLVNTSLFSFNKTYDYQSVCDPERETKAA
AGPRSVYVPTIADMLTVGWWASTAVWSVLQQLLLSLTLPNLVGTAYSEDDLSDAFSKESC
ITEQTQYFFENENKSFSGAMDCGNCSRMYRAEKLPNTNLVFLISDAKSSCLSCDPKPLRQ
AEQPSTGPDPCVLAQNPRYRKGPDVCFDNNLDEDASDCGGGCSLSPSLWPMLALQLLLLW
LLTGSRTYLS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgatggtgcgcccgagatcaacagatctgatcatgaatccgttcagaatctccgtgctg
atgatgttcatcttcgcatctgttcatatctcctgcccatcgcagttccccagtccgctc
atgataaaagaatgggtagatcagctgcagcaggagctggtttctctagcagacacagcc
agcgctggaaataatctaagacagatctttatggataatcagaattatttcactgtggaa
acaaataatgcagcacagcttgtggaaacagcggcacggaatatagaaagttttttgaag
aagcgagccgcagctctagagactttggcaaccgcagcagagaatttccaaatggagcat
caatggaaagatgaatttgaagaggacgatatagtttactataatgccaaggataatctt
gaagccaatgaaacagagggaaggaaaaaccggatcagaccggaatttaaagaagacccg
tcattcaaaaaccgcctcacctcctacagtcatacggctgtgcatatccccacggacata
tacgacggctccaccattgtgttgaatgagctgaactggaccgaagcattagaagacgtc
tttaagagaaaccgagaagaggatccaacgctactatggcaagtgttcggcagtgctacg
ggtttagctcgctattacccagcttccccgtggatggatgccaggaaaacacccagtaaa
atcgacctgtatgatgtgcgccggcgaccttggtatgttcaaggtgccgcttcgcccaag
gacatgctgattcttgttgatgcgagtgggagtgtgtctggactgacccttaaactcatc
cgaacctctgtcagcgaaatgctggagacactttctgatgatgattatgtcaatgttgtc
cattttaacacaaaagtgaataacacagcatgtttcgaccacctggttcaagctaacgtt
cgcaataagaagatcttaaaagatgcagtgcagaacatcacagccaagggcatcaccaac
tacaccaaaggctttgaatttgccttcaatcagctctcaaatccaaacatcaccagagca
aactgcaacaagatcataatgctgtttactgacggaggcgaggagagggcagaggagatc
ttcagcagatacaacattgacagaaaggtgcgtgtgttcacattttctgtgggtcaacac
aactatgacaccgggccaataaagtggatggcctgcgctaataagggatatttctacgaa
atcccatccattggagccattcgcataaacacgcaggagtatctagatgttttgggcagg
ccgatggtcctcgcagatgccaaacaagtgcagtggaccaacgtgtacttggatgctctg
gagttgggactagtcatcacaggcacgctacctgtattcaacaagaccaaatccagagag
ggtggatctcgaaaccagcatcagaaccagttgattttaggagtgatgggggtggatgtg
tctcttgatgatatcaaaagactgacgccccgcttcacaattggtcctaatggatattat
ttcgcaattgatcctaacggttacgtgctgcttcatccaaacctgcaaccaaagaacccc
aaattccaggagccggttacactggatttcctagatgcagagctggaaaatgatattaaa
gtccagatacggactctgatgattgacagagaccctggggagaaaacaatagaaacgctt
gtgaaatctcaagatgagagatacattgatcgaggaatcaggacctacacctgggcaccg
gttaacgggacagactacagcctggccttggttttgcctgaatacagtctgcattacatc
gaggcaaacctgggggacactataaaacaagccatgtcctttgaaaccatgcagcaggag
aaatttgaggaatatgggtacacctttattgcacctagggaatactgcaaggacctcaaa
gtctcatccaacaacacccagttcctgcaagacttcagtgactacattgacaggaaaaca
ccaaatgatcctatgtgtaatgtcactcttgtaaaccggttgctgctggacgccggtctc
acggcagacctcgtcaaagtctggaaggagcagagtgtagatggagttttggcccggttt
gtggctacagatggaggcattacacgtgtgtatcctaaaagtgctggggaagaatggggt
gaaaactctgagacctatgactcaagtttttacaaaaggagtctggacaacgacatatac
atcttcaccgccccatacgtcaacaagagcagagagtctggttatgagtctggtatcctt
gtcagtaaagcggtggacttggacattgatggagcaaaactcaaacctgccgtggtggga
gtcaaactcaacgtgtcagcctggatgaacagcttcataaacgctaccaccaagaaaaat
tgcaaggatgagatctgcgggtgcctcagaaatgataagcaagtggactgtgtgatactg
gatgatggcggatttctgctcatgtccaatcaggatgaatatatcacacagataggtcag
ttctttggtgaagtggaccctgttttgatgatcactctggtcaacacctcactcttctct
tttaataaaacctacgactaccaatccgtctgcgacccggagagagaaactaaagctgct
gccggaccccgctctgtatacgtgccaacgatagcagatatgctgactgtaggctggtgg
gcctccactgcggtttggtcagtattgcagcagctacttctcagtctgactctcccaaat
ttagtgggaacagcgtactcggaggatgacctctcggatgcgttctccaaagagagctgt
atcaccgaacagactcagtatttctttgagaacgagaacaaatctttctctggagctatg
gattgtggaaactgctccaggatgtaccgggcagagaagcttccaaacacaaatttggtc
tttttgatctctgacgcaaagagttcctgcctgtcctgcgatcccaaaccgctgagacaa
gccgaacagccctctactggtcctgatccatgtgtgctggcccagaaccctcggtacagg
aaaggaccggacgtctgctttgacaacaacttagatgaggacgcatccgactgtggtggc
ggctgcagtttgagtccatctctctggccaatgttggctcttcagctccttctactctgg
ctgctgactggaagcagaacctatttgtcctga
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