Labeo rohita (rohu): 127181104
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Entry
127181104 CDS
T09007
Symbol
nr1h4
Name
(RefSeq) bile acid receptor isoform X1
KO
K08537
farnesoid X receptor
Organism
lroh
Labeo rohita (rohu)
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lroh03000
]
127181104 (nr1h4)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
lroh03310
]
127181104 (nr1h4)
Transcription factors [BR:
lroh03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
127181104 (nr1h4)
Nuclear receptors [BR:
lroh03310
]
1. Thyroid hormone like
1H. Liver X receptor like receptor
127181104 (nr1h4)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
127181104
NCBI-ProteinID:
XP_050991595
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Position
18:9896816..9918121
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AA seq
483 aa
AA seq
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MNEWVGHDVNVVGPLQIPPSDVFPLSESSHFFDILAEQNSPLLQDQEVMPFTNYPSMQYT
SVEPSMSSPSYYSNQHCYPQYSGEEWFSPTTMFEMRKGPLEGGFDNELEESCPVVPTVCK
RPRHAAHSGRSKGEELCVVCGDKASGYHYNALTCEGCKGFFRRSITKNAVYKCKSGGNCE
MDMYMRRKCQECRLRKCKEMGMLAECLLTEIQCKSKRLRKNTKASSDESTGDDVVDSRDG
KQVVSTTKPSKENLELSQDQQALINYIVDAHNKHRIPQEMAKKLLQEQFNAKENFLLLTE
MATTHVQVLVEFTKNIPGFSTLDHEDQIALLKGSAVEAMFLRSAQVFSKKQPNGHTEVLE
DRIRRSGMSEEFITPMFNFYRSIGELQMMQEEHALLTAITILSPDRPYVKDQQAVERLQE
PLLEVLRKICKIQHPHDPQHFARLLGRLTELRTLNHHHAEMLESWRMSDHKFTPLLCEIW
DVQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaatgagtgggtgggccatgacgtcaatgtggtgggacctttacagatcccacccagt
gatgtgttccccctatcagagagctcacacttttttgatattctggcagagcagaacagt
ccattgctacaggaccaggaggtcatgcctttcaccaactatcccagcatgcagtacacc
tcggtggagccctccatgtcatcaccatcatattactccaatcagcactgctacccacag
tacagcggggaggagtggttctctccaactaccatgtttgagatgagaaaaggaccgttg
gagggcggcttcgataatgagctggaagagtcttgccctgttgtcccaaccgtgtgtaaa
agacccagacacgcagcccactccgggcgaagcaaaggcgaggaattgtgtgtggtctgt
ggagataaagcatcagggtatcactacaatgcactgacatgtgaaggatgtaaaggtttc
ttcagaaggagtatcacaaagaatgctgtatataaatgcaagagtggaggaaactgtgag
atggacatgtatatgcgaaggaaatgccaagagtgtcgactcaggaagtgcaaagagatg
ggcatgctggcagaatgcttgttaaccgaaatccagtgcaaatccaaaaggctaaggaaa
aacacaaaggcctcatctgacgaaagtacaggggatgatgttgttgacagtcgagatggt
aaacaagttgtatctaccactaaaccatccaaggagaatttagaactgagccaagaccag
caggctttaataaattatatagtcgatgctcacaacaaacatcgcattcctcaagaaatg
gcgaaaaaactgctacaagagcaatttaacgcaaaagaaaacttccttctactgaccgaa
atggcaactactcacgttcaagttctggttgagttcacaaaaaatataccaggtttttca
actctggatcacgaagatcagatcgctttattaaaaggatccgctgtagaggcaatgttc
ctgcgttcggcgcaggtcttctccaagaaacagcccaatggacacacagaggtgctagag
gacaggatcagaaggagtgggatgtctgaagaatttatcacacccatgtttaacttctat
agaagcatcggggagctgcagatgatgcaagaggaacatgctctcctcactgctatcaca
atcctctcaccagacaggccatacgtaaaggaccagcaggcagtagagcgtctacaggag
cccttgttggaggttctaaggaaaatctgtaaaatacagcaccctcacgatccccagcac
tttgcacggcttctcggtcgtctgactgagcttcgcaccctcaaccaccaccacgccgaa
atgctggagtcatggcgcatgagcgaccacaagttcacccccctcctctgtgagatctgg
gatgttcaatga
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