Labeo rohita (rohu): 127181931
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Entry
127181931 CDS
T09007
Name
(RefSeq) NACHT, LRR and PYD domains-containing protein 1 homolog
KO
K12798
NACHT, LRR and PYD domains-containing protein 1
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
127181931
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lroh04131
]
127181931
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
lroh04054
]
127181931
Membrane trafficking [BR:
lroh04131
]
Autophagy
Other autophagy associated proteins
TRIM-directed selective autophagy
127181931
Pattern recognition receptors [BR:
lroh04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
127181931
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
FIIND
UPA-FIIND
NLRC4_HD2
NOD2_WH
AAA-ATPase_like
FISNA
AAA_16
nSTAND3
DAP3
Motif
Other DBs
NCBI-GeneID:
127181931
NCBI-ProteinID:
XP_050992915
LinkDB
All DBs
Position
2:32070102..32077928
Genome browser
AA seq
1025 aa
AA seq
DB search
MSRFGWRDMIRKYKTSVNDKCQFVTEFNLPSVERVELAAHYTEPVIIQRSKEQTEKCFRR
WMMSEHTFGLTPSSGLLSNDIRIDQLFSPDSDGNKPKSVILKGDSGRGKSLMLQKIMLDW
ASGELYSENFDVIFLLKCDEVKCLSQEMRLNELLSWSCSLTSDQISQILELTPEKVLILI
DGIDEFSLDSHIQKSSTTNPSQEALPMVTLRSLLTGQILPESFLLVTTRSDTFTVMNLLK
GPQRFTEIMGFSEREVQEYFQKFFQDEKLFGNAYECVNTNGSLLAACSVPLLCWLVCFCL
KKHFTDDDRVMRELKTTTSIYVHFVSTLLEHHDQSQSVLTMLRSLGQLAEEGMKKQQVFF
DEKSVAETGLDPATTLFLFEGSLKIKDKQEPVFRFMHSSFQEFFTALYYVLLDEETSWRK
LRELLVRVERGNEIYRSSPARSYPMPSVMMFLCGLLNEEMSSSIFEKIKWTVPQTITLKE
RLGRMIFRLIRHGGCRLLFALHCLYELQDERFVGEALKTHMFIDLSDISLRSTDCWVLLY
CLQCCPRIRYLHLMSCDLTAEKLKILQPAFCMCESLCLSVEHLSDTGDLIQSLGESKILR
HVVFELLRDNPSFPAVLNISLTCPQSEISSTDWTLFLKRLSKTGKVSEDSSALDEHTLDL
NLVVLNKSWASGIISLAQTCTSLQELKMKSSKPTDQCKGQDWSHMSCNEKVEIHFKPKVL
KKLKELNISDSELSGLNLQPLPVCQSCVHIVDSDQWVQVEPSVCTDEGGSAFRISTPAGR
FECSRTRMRWVCAGDITLQYRAVNGRFLRAELERLQCERIGPVIDVTVISGKLEEVHLPH
YACLAESDPAFRDAVKLLTKRDEGIALQSVELTRYHAKIVQPSFSLITLIISWFLTWEEH
CDHLIFRRCKDPLFLHIYFFPVNDTCSKEKVKQDEKTSFLIRHPRPDRPFRLKTPHLLEV
PGASVQPIEGISFRTDIDPNFFKVRKQEHDDVQLNLIREEDKKSVWKATIWKEEFAPVKS
NVSPR
NT seq
3078 nt
NT seq
+upstream
nt +downstream
nt
atgagccgctttggttggagagacatgattcgtaagtataaaacatcagtcaatgataaa
tgtcagtttgtgacagaatttaatcttccatctgttgaacgtgtggaactggccgcccat
tatactgaaccagtgatcatacagaggagcaaagagcaaactgagaaatgctttcgtaga
tggatgatgtctgaacacacttttggactaacgccatcatctggactgttatcaaatgac
atcagaatagaccagctgttcagtcctgacagtgatggaaacaaaccaaaatctgtgatt
ctcaaaggagattctggaagagggaaatccttaatgttacaaaagatcatgttggactgg
gcatctggagaactttattctgaaaactttgatgtaatttttctgttgaagtgtgatgag
gtgaagtgtctttctcaggagatgaggttgaatgagctcttgagctggagttgcagctta
acatcagatcagatttcacagatactggagttaacaccagagaaagtcctcatcctcatt
gatggaattgatgagttctcattggattcacacattcaaaaatcatcaaccactaatcca
tcacaggaagccctaccaatggtcactcttaggagtttgttgactggacagatcctgcct
gagtctttcctgctggttaccaccagatcagatacttttacagtgatgaatctcctcaaa
ggacctcagcgtttcactgagattatgggcttctctgagagagaggtgcaggagtacttc
cagaagttctttcaggatgagaagctctttgggaatgcatatgagtgtgtaaatacaaat
ggaagcctccttgctgcctgctctgtacctttactgtgttggttggtctgtttttgtctg
aagaaacactttacagatgatgatcgtgtgatgagagaactaaagacaaccacctccata
tatgtgcactttgtgtccactctactggagcatcatgaccagagtcagtctgtcctcacc
atgctgaggagtctgggtcagctggcagaggaagggatgaagaagcagcaggtgtttttc
gatgaaaagagtgtagccgagactggtttagatccagctactactttgtttttgtttgaa
ggtagtttaaaaataaaagacaaacaggagccagtgtttaggtttatgcattccagcttt
caggagttcttcactgctctttattatgtcttactggatgaggaaacgtcctggaggaaa
ctccgtgagctgcttgtcagggtggaacggggaaatgaaatctataggtcatcaccagca
agatcatatcccatgccttcagtcatgatgtttctctgtggtctcttaaatgaggagatg
agcagctcaatctttgaaaagatcaagtggactgttcctcagacaataacactaaaagaa
agactgggtagaatgatttttagattgataaggcatggtggatgtagactgttgtttgct
ctccactgtctgtatgaactccaagatgagagatttgtcggggaagctctgaaaacacac
atgttcatagatctgtctgacatttccctgaggagcacagactgttgggtgctgctgtac
tgtcttcagtgctgtccacgcatcagatacctgcacctcatgtcatgtgatttaacagct
gagaaactcaagattcttcagccagcattctgtatgtgtgagagcctttgtttgtcagtg
gagcacctgtcagacactggagatttgatccagagtcttggtgaatcgaaaatcttgaga
catgttgtctttgagctcctcagagacaatccatcatttccagcagtattaaacatcagt
cttacatgtccacaatcagagatatccagcactgactggacactcttcttaaagagactc
agcaagacaggaaaagtatcagaagactcttcagctcttgatgagcatacattggatctg
aatctggtcgttctgaataagagctgggcttctgggatcatttccctcgcccagacctgc
accagtctacaggagctcaagatgaagtccagtaaacccactgaccagtgcaagggacag
gactggagtcacatgagctgtaatgagaaagtggagattcacttcaaaccaaaggttttg
aaaaagctgaaagagttgaacatctctgactctgaactgtctggactgaatcttcagccg
ctcccagtgtgtcagtcttgtgttcacattgttgattcagatcagtgggttcaggtggag
ccgtcagtctgtacagatgaaggagggtcagcattcaggatcagcactccagcgggtcga
ttcgagtgcagcaggaccagaatgcgatgggtctgtgctggtgacatcactctccagtac
cgtgcagtgaatggacgtttcctcagagcagagctggagaggcttcagtgtgagcgaatt
ggtcctgtgattgatgtgacagtgatctcagggaaactggaggaggtccatctgcctcat
tacgcctgtttagcagagtcagaccctgctttcagagatgctgtgaagctccttaccaaa
agagatgaaggaatagctttacaatctgtagagttgacccgttatcatgccaaaatagtc
caaccatccttctctcttataactttgattataagctggttcctaacgtgggaagaacac
tgtgatcatcttatcttcaggcggtgtaaagatcctctctttcttcacatctactttttt
ccagtgaatgacacttgttcgaaagaaaaagtcaagcaggatgaaaaaacaagttttttg
atcagacatcccagacctgacaggccatttcggttgaaaacacctcaccttcttgaggtt
cctggtgcatctgtccaacccatagaggggatttcatttagaacagatattgacccaaac
ttcttcaaggtcagaaaacaagagcatgatgatgtacaactgaatcttatcagagaggaa
gacaagaagtctgtgtggaaggccacaatatggaaagaagaatttgccccagttaaatcc
aatgtaagtccaagatga
DBGET
integrated database retrieval system
