Labeo rohita (rohu): 127182106
Help
Entry
127182106 CDS
T09007
Symbol
setdb1a
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1-A
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
lroh
Labeo rohita (rohu)
Pathway
lroh00310
Lysine degradation
lroh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lroh00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
127182106 (setdb1a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lroh03036
]
127182106 (setdb1a)
Enzymes [BR:
lroh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
127182106 (setdb1a)
Chromosome and associated proteins [BR:
lroh03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
127182106 (setdb1a)
Heterochromatin formation proteins
Other heterochromatin formation proteins
127182106 (setdb1a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SET
Tudor_5
Pre-SET
Tudor_4
MBD
DUF5604
DUF7206
Sigma54_AID
DUF7141
Motif
Other DBs
NCBI-GeneID:
127182106
NCBI-ProteinID:
XP_050993175
LinkDB
All DBs
Position
19:complement(25554949..25575513)
Genome browser
AA seq
1560 aa
AA seq
DB search
MPLVDCASASTQAHKAMSSRKDDDNLLRMTKDDLQRWIQAEVERNPHLMQRREQLAQVEE
WVKQRERESTCTRLLYSNAYESVLECESVMKGLYGMLGLDYRDEDSEEEEGGGGEPQGVI
GITDEGIQENSVLNGEDDDIVVIDLGATKETLEPMLEKVTVAIQKSSRLVEDLVQMVNKS
FSGSATSPSSSSDFSNRPSSSSTPEIVHSESVTPKLETRENSIAIVKTESLSRVPEMSSE
QYKSVAGRKSDSRPTIKTEPQLTALTPWETSISKRHETAASLNCPSLKLIKSEPQLTAVS
PPETTASIFGSIAAIKTEPQLRVIKSEMDSPPSISKPFEIASIASIKTKPQLRALTPLSL
LESDSEQSSSLNSDREATNMTKLTLPPVASPEIPSLSEQLKASICPSSASVASSETDPQV
PLETPLEMPSPSSSPEQMEIDAGDDTETVETNQTEPTAETPAEVSPLPSNSEEAETVASH
DSESTDETEKPKTRSRSAKPSVPRTSPTPRVRSSKNSAHVSSSSSPQSETKAPSPADSNH
EPSDIEDQSASPADSDYEPPESQSESSSDSDYEPPKSQPKSSTGRDHKPAKSQSKSLTGR
DYEPPKSQSKSSINSHNEPPKSQSKSPTNSDYEPPKSKSQSSGDSSDDDSGNDALTEPSS
PDESSKFLPSESSEEHEELKLKVSMEVLGKRRHNLWCKGTVQEVQTAEDGLRYKVEFKSG
KEIVLPAHQVASLKPPILKDLFIGCRVVASCKDNEGKVQFNAAVLVELPERKNRMRFLVF
FDDGQAAYLALPDIRRVCKQLKKVWKDIEDETYRLQVKEYLRVYPNPVAVVLRVGQDTKA
MRDGKFETCTVLQLDGSLIQICFKKDKQKEWIYKGSDRLEHIVNIKKRLAKDKPQKQHSQ
QKTQQSSQQKTQHTTSSTTTVPSSTVTSPVTSAAVSPARLTRQSDTVTKTSSVIPQKMMS
ATFQPKVILQRLTKLSPLLQDVRVSKDSMHTVRSSTVNSTSDLRSAKRPASDEGEEYVSE
EEECVPKQQQYKSTYLHHRCCPACLDGVRPSQVDMHRGQNPLLIPLLFKFRRMTARRRID
GKVFFHIFYRSPCGRSLCDMHEVQEYLLETRCDFLFLEMFCMDPFVLVNRARPPSTSTGK
PHLYLPDITEGKEVLPVPCVNEVDYTLAPNIIYTKDRIPAPGVSINTSSDFLIGCDCTDG
CRDRSKCACHQLTIEATSLCSGGPVDVSAGYTHKRLPTSLPTGVYECNPLCRCDPRMCSN
RLVQHGLQLRLELFMTQHKGWGIRCKDDVAKGTFLCVFTGKIVNEDRVNEDDTVSGNEYL
ANLDFIEGVEKLKEGYESEAYFSDTEVENNKKTITMKTGPLWKNTLYQEDSSSGEEREEQ
MELDTEQEEMKVTYTHLGEKKLSHKPHVTSKDAQKKVTRQMREEGKETSGPKRCFAIKSF
QRRVKPLETTGAKNEKTRTAVTGNNTRRLFNGEESCYIIDARQEGNLGRFINHSCSPNLF
VQNVFVDTHDLRFPWVAFFASKRIKAGTELTWDYNYEVGSVEGKVLLCCCGSLRCTGRLL
NT seq
4683 nt
NT seq
+upstream
nt +downstream
nt
atgcctcttgtagactgtgcatccgccagcacacaggctcataaagccatgagtagccga
aaagatgacgataacctcctgagaatgacaaaggatgacctgcagcgctggatccaggct
gaggtggaacgaaaccctcatctgatgcagagacgcgagcagctggcgcaggtggaggag
tgggtgaagcagagggagagggaatccacttgcacccgcctcctgtacagcaatgcctac
gaatcagtccttgagtgtgagtcggtgatgaagggcctttatggaatgctgggattggat
taccgagatgaggattcggaggaggaagaaggaggaggaggagaaccacagggtgtcatt
ggcatcacagatgaagggatacaggaaaatagcgtattgaatggggaagatgatgatatt
gttgtcattgatcttggagccaccaaagaaaccttggaaccaatgcttgaaaaggtgact
gtagccattcagaagtcatccagactcgttgaggacttagtccagatggttaataaatct
ttctccggaagtgcaacatcaccatcatcatcgtctgacttctcaaacagaccctcgtca
agctcaacccctgagattgtccattctgaatctgtcacaccaaagctggaaacacgtgaa
aactctattgcaatagttaagactgaatcactgtcgagagtacctgaaatgtcctcggaa
caatacaaatctgttgccggtcgtaagtcagattctagaccgacaattaagactgaacca
caactgacagcactaaccccttgggaaacaagcatttcaaaacgacatgaaaccgctgct
agtcttaactgtccatccttaaaattaattaaatctgaacctcagttgacagcagtgagt
ccaccagaaacaactgccagtatttttggatccatagcagcaataaagactgagcctcag
ttgagggtcataaagtcagaaatggattcacctccaagcatttcaaagccttttgaaatt
gcatccattgcatcaattaaaaccaaacctcagctgagagcattaacacctttgtctttg
cttgaaagcgattctgaacagtcaagcagccttaattcagatcgtgaagcaacaaatatg
accaaacttacgttgccgccagtggcttctcctgaaatcccttcactctcagaacagtta
aaagctagtatctgtcctagttcagcatctgtagcatccagtgagactgatcctcaagtg
ccattagagacccctttagaaatgccttcaccttcaagcagtccagaacaaatggaaatt
gatgccggtgacgatacagaaactgtagaaacaaaccagactgagccgaccgcagagact
cctgctgaagtgtcgccattgccaagcaattctgaagaagctgaaactgttgccagccac
gattcagagtccacagatgagaccgaaaagcctaaaacaagaagcagatctgccaaaccc
tctgtgcccaggacaagtccaacacctagggtgaggtcttcaaaaaactctgcacatgtc
agcagctcttccagcccacaatcggaaacaaaggcgccatcgcctgcagatagtaatcat
gaaccctctgacatagaggatcagtctgctagtcctgctgacagtgattatgagcctcct
gaatcgcaatcagagtcatcgtcagacagtgattatgaaccccctaaatcacaaccgaag
tcatcgacaggcagggatcataaacccgctaaatcacagtcaaagtcattgacaggcagg
gattatgaaccccctaaatcccagtcaaagtcatcaataaacagtcataatgaaccgcct
aaatcacagtcaaagtcaccaacaaacagtgattatgaaccccctaaatcaaaatcacag
tcatctggcgattcttctgatgatgacagcggcaatgatgctcttacagaaccttccagt
cctgacgaaagttccaagtttttacccagcgagtcttctgaagaacatgaagagctaaaa
ctcaaagtcagcatggaagttttggggaaaaggagacacaacttgtggtgtaaagggaca
gtacaagaagtccaaacagcagaggatggcttaagatataaggtggagtttaagagtggt
aaagagattgtgctgcctgctcatcaggtggcctctctgaagcctcccattcttaaggat
ttgttcattggctgtcgtgttgtggccagctgcaaagataatgaaggaaaggtccagttt
aatgcggccgtattggttgaacttcctgagcgcaagaatcgcatgaggttcttggtgttt
tttgatgacggtcaagcagcttacctggcacttccagacattcgtcgtgtctgcaaacaa
ttgaaaaaggtgtggaaggacattgaggatgagacatatcggttgcaggtgaaggaatat
cttcgtgtgtatcccaaccctgttgctgtggtgcttcgcgtgggccaagacaccaaggcg
atgcgggatggcaagtttgagacctgcacggtgctccagttggatggcagcctgatccag
atctgctttaagaaagacaagcagaaagagtggatttataaaggctcagacaggttggaa
cacattgtaaatatcaagaaacgtctggctaaagataaaccgcagaaacaacattcgcaa
cagaaaacacaacaatcttcgcaacagaaaacacaacacacaacttcttccacaacaaca
gttccctcatcgactgttacttcacctgttacctcagcagctgtatctcctgcacggctg
acccgacaatctgatacagttaccaaaacatcatctgttatccctcaaaagatgatgtca
gccactttccagccaaaggtcatcctccagaggttaacaaagctttcacctctcttacaa
gatgtccgtgtatcaaaggatagcatgcacacagtaagatcttcgactgtaaacagtacc
tcagatttaagaagtgcaaaacgtcctgcctctgatgagggagaagagtatgtttctgag
gaagaagagtgtgttccaaagcaacagcagtataagtccacatacttgcatcatcggtgt
tgtccagcatgtctggatggggtaagaccatctcaagtcgacatgcaccgtggtcaaaat
ccacttctcatcccactgctttttaagtttcggcgaatgacggctagaaggcgcatcgat
ggaaaggtgtttttccacattttctatcgttctccttgtgggcggagcttgtgcgacatg
catgaagtgcaggaatacttgcttgaaacgcgttgtgacttccttttcctggaaatgttc
tgtatggacccatttgttcttgtgaatcgtgcccgacctccctccacatcaaccggcaag
cctcacctctacctaccggacataacagaaggcaaagaggtgttgccggtgccctgcgtt
aatgaagtggactatacacttgctcctaacatcatttacactaaagacagaattccagcc
ccaggtgtttctatcaatacaagctcagacttcttgatcggctgcgactgcacagatggc
tgtcgggacaggtcaaagtgtgcatgccaccagctgaccattgaggccacgtccttatgc
agtggaggtccagtggatgttagtgctggatacacacacaagagattgccaacctccttg
ccaacaggggtgtacgagtgtaacccactgtgccgttgtgacccgagaatgtgcagcaac
aggctggttcagcacggtctgcagctgcggctggagctcttcatgacgcagcacaaggga
tggggcatccgctgcaaagatgatgtggccaagggcacatttttgtgtgttttcactggt
aaaatagtaaacgaagacagagtgaatgaagatgacacggtgtctggcaatgaatatttg
gccaaccttgactttattgagggtgtggagaaactaaaagagggatatgagagcgaggcg
tatttctcagacacagaggttgaaaacaacaagaagaccataacaatgaaaacagggcca
ttatggaaaaacactctgtaccaagaagactctagcagtggcgaagaaagagaagaacaa
atggagctggacacagaacaagaggaaatgaaagtgacttacacacatttaggtgagaaa
aaactatcccataagccacatgtaacatctaaagatgctcagaaaaaagtgaccaggcaa
atgagagaggagggtaaagaaacctcaggtccaaagcgttgctttgcaataaaatcattc
cagagaagagtgaaaccattagaaactacaggtgcaaagaatgagaaaacgaggacggct
gtaactggcaacaacacccgtagactgttcaacggcgaagagagctgttacatcattgac
gcgagacaagagggcaaccttgggcgcttcatcaaccatagctgcagtccgaatttgttt
gttcagaatgtctttgtcgacacacacgacctcaggtttccatgggtggcgttctttgct
agcaagcgcatcaaggcaggtacggagttgacgtgggattataactatgaggttggcagt
gtggaggggaaggtactgctctgctgctgtggctccttgcggtgcacaggaagactgctc
tga
DBGET
integrated database retrieval system
