Leucobacter rhizosphaerae: MUN76_01445
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Entry
MUN76_01445 CDS
T09062
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
KO
K01972
DNA ligase (NAD+) [EC:
6.5.1.2
]
Organism
lrp
Leucobacter rhizosphaerae
Pathway
lrp03030
DNA replication
lrp03410
Base excision repair
lrp03420
Nucleotide excision repair
lrp03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lrp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MUN76_01445 (ligA)
03410 Base excision repair
MUN76_01445 (ligA)
03420 Nucleotide excision repair
MUN76_01445 (ligA)
03430 Mismatch repair
MUN76_01445 (ligA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrp03032
]
MUN76_01445 (ligA)
03400 DNA repair and recombination proteins [BR:
lrp03400
]
MUN76_01445 (ligA)
Enzymes [BR:
lrp01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.2 DNA ligase (NAD+)
MUN76_01445 (ligA)
DNA replication proteins [BR:
lrp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
MUN76_01445 (ligA)
DNA repair and recombination proteins [BR:
lrp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA ligase
MUN76_01445 (ligA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MUN76_01445 (ligA)
MMR (mismatch excision repair)
DNA ligase
MUN76_01445 (ligA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
MUN76_01445 (ligA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
HHH_2
DNA_ligase_ZBD
BRCT
HHH_5
HHH
PTCB-BRCT
Nlig-Ia
HHH_3
Zn_ribbon_TFIIB
Motif
Other DBs
NCBI-ProteinID:
UOQ60679
UniProt:
A0ABY4FWL1
LinkDB
All DBs
Position
314061..316397
Genome browser
AA seq
778 aa
AA seq
DB search
MSEGSDPTFEEARAEAEQLTAEIERLRTAYYSEGVGMVSDAEYDVMFRRLEELERLFPEL
MGQDSPTQEVGAAVVSAGFPEHEHAERMLSLDNVFSLEEFREWAEKTRLAAGRDVRWLSE
LKIDGLAISLAYRNGVLETATTRGDGRVGEDITENVDLIPVIPRELSGSGIPEFFEARGE
VFLRSADFEALNVRQQELQAAFVAEQTARGKDPESIPVRYPEFANARNTAAGSLRQRADN
KSDADLELMRGRLARLSLYVHGIGAWSHPAFENQSDAYALLDAWGLPVSPHSRVFDSADD
VVGFIEDRGAHRHDVEHEIDGIVVKVDELELHAELGETSRAPRWAIAYKFPPEEVHTTLL
DIRVGVGRTGRATPYAVMAPVKVAGSTVRQATLHNQQVVKAKGVLIGDTVVLRKAGDVIP
EVLGAVLERRDGSEVEWHMPADCPECGTELRPMKEGDIDLRCPNARACPAQVRGRVEHIG
SRGALDIEVLGEITAAALTQPKVPATPPLETEAGLFDLTLDQLVPIEVIVRDSETGERRV
DEATGEYVRRAPFQRVSIEYPPEAEGLTATERRAAGLRKNVRVVTPSKDAETFLAELERA
KTKPLWRLLVSLNIRHVGPVAARALADWFGSLDAIRSASVAELSEVEGVGETIAVAVTEW
FELEWHREIVDRWSAAGVQWSTPGHPGPGAAVAAGGVLSGLTVVATGSLEGFTRDGAKEA
IIQAGGKAASSVSKKTDYVAAGPGAGSKLGKAEELGIPVLTAEQFAVLVTEGPAALDL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagggatctgacccgacgttcgaggaggcgcgcgcggaggcggagcagctgacc
gccgagatcgagcggctccgcacggcctactactcggagggcgtcggtatggtctcggac
gccgaatacgacgtcatgttccgtcgtctcgaggagctggagcggctgttcccggagctg
atggggcaggacagtccgacgcaggaggtcggtgcggcggtcgtctcggcggggttcccc
gagcacgagcacgccgagcgcatgctcagcctcgacaacgtcttctcgctggaggagttc
cgcgagtgggcggagaagacgcggctcgcggcggggcgcgacgtgcgctggctctccgaa
ctgaagatcgacggtctggcgatcagtctggcctaccggaacggggtgctcgagaccgcg
acgacccggggtgacggccgggtcggagaagacatcacggagaacgtcgatctgatcccg
gtgatcccgagggagctcagcggcagcgggatcccggagttcttcgaggcccgtggcgag
gtgttcctccggagcgccgacttcgaggcgctcaacgtgcgtcagcaggagctgcaggcg
gcattcgtggccgagcagaccgccagggggaaggatcccgagtcgatcccggtgcgctac
cctgagttcgcgaacgcgcgcaacacggccgccggaagcctgcggcagcgcgccgacaac
aagtccgacgccgacctcgagctcatgcgcgggcggctcgcgcggctgtccctctacgtg
cacggcatcggcgcctggtcgcaccccgcgttcgagaatcagtcggacgcctacgctttg
ctcgacgcctgggggctcccggtctcgccgcactcccgcgtcttcgactcggccgacgat
gtggtggggttcatcgaggatcgcggcgcgcaccggcacgatgtcgagcacgagatcgac
ggcatcgtggtgaaggtcgacgagctggagctgcacgcagaactcggcgagacgagtcgt
gcgccgcgctgggccatcgcctacaagttccctcccgaggaggtgcacacgacgctcctc
gacatccgggtgggtgtcggacgcacggggcgcgccaccccgtacgccgtgatggcgccg
gtgaaggtcgccgggtccaccgtgcggcaggccacgctccacaatcagcaggtcgtgaag
gcgaagggggtgctcatcggcgacacggtggtgctgcgcaaggccggcgacgtgatcccc
gaggtcctgggtgccgtgctggagcggcgcgacgggagcgaggtcgagtggcacatgccc
gccgactgcccggagtgcggcaccgagctgcgaccgatgaaggagggggacatcgacctc
cgctgcccgaacgcgcgggcatgcccggcgcaggtgcggggccgggtcgagcacatcgga
tcccggggcgctctcgatatcgaggtgctcggcgagatcaccgcggccgcgctcacccag
cccaaggtgccggcgaccccgccgctggagaccgaagccgggctcttcgacctgaccctc
gatcagctggtgccgatcgaggtgatcgtgcgcgacagcgagacgggtgaacgccgcgtc
gacgaggcgacgggggagtacgtgcgccgcgcgcccttccagcgcgtctcgatcgagtac
ccgcccgaggccgaggggctcaccgcgaccgagcgccgcgccgccgggctgcggaagaac
gtgcgggtggtgaccccgtcgaaggacgccgagactttcttggcggagctcgagcgcgcc
aagacgaagccgctctggcgcctcctggtctcgttgaacatccgtcatgtcgggcccgtc
gccgcgcgagcgctcgcagactggttcgggtcgctcgacgcgatccggagcgcgtcggtc
gcggagctctccgaggtcgaaggcgtcggcgagacgatcgccgtcgccgtgaccgagtgg
ttcgagctcgagtggcaccgggagatcgtggaccgctggtccgctgccggggtgcagtgg
tcgactcccgggcatccgggacccggggccgcggtcgccgccggcggtgtgctctccggc
ctgacggtggtcgcgacgggcagcctcgaggggttcacgcgggacggcgccaaggaggcg
atcattcaggcgggtggcaaggccgcatcgagtgtctccaagaagacggactacgtcgca
gcgggacccggtgcgggttccaaactcggaaaggccgaggagctcgggatccccgtgctc
acggccgagcagttcgccgtgctcgtgacggaggggccggccgcgctcgacctgtga
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