Limnoglobus roseus: PX52LOC_03909
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Entry
PX52LOC_03909 CDS
T06556
Name
(GenBank) ribonuclease H
KO
K22316
ribonuclease H / adenosylcobalamin/alpha-ribazole phosphatase [EC:
3.1.26.4
3.1.3.73
]
Organism
lrs
Limnoglobus roseus
Pathway
lrs00860
Porphyrin metabolism
lrs01100
Metabolic pathways
lrs01240
Biosynthesis of cofactors
lrs03030
DNA replication
Module
lrs_M00122
Cobalamin biosynthesis, cobyrinate a,c-diamide => cobalamin
Brite
KEGG Orthology (KO) [BR:
lrs00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
PX52LOC_03909
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PX52LOC_03909
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lrs03032
]
PX52LOC_03909
Enzymes [BR:
lrs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.73 adenosylcobalamin/alpha-ribazole phosphatase
PX52LOC_03909
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.4 ribonuclease H
PX52LOC_03909
DNA replication proteins [BR:
lrs03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
RNase H
PX52LOC_03909
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RVT_3
RNase_H
RRN9
Motif
Other DBs
NCBI-ProteinID:
QEL16933
UniProt:
A0A5C1AFD3
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All DBs
Position
complement(4580913..4581680)
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AA seq
255 aa
AA seq
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MPRFPAPAARGDKGLAHPALRLFQRPRDGFWTIRFDGSCADNGSAFASGKWGFLILDAAG
RPVRRKSGDTVAAAVTNNVSEWRSVAEAVREIEAGPRPTGLLFEGDSRLVVEQLTGAWAS
KKAELTAIRDEVRDALARVGLPWAAKWIPREENSEADELTRPETPIEDWSAWPEAEETVI
EEPEPTPATAPPTTPAKEQASELTTAGDPARLRLFLVVARSAAEARALTGAGDGDRVEEV
TLTAAKVLLSVGGVG
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgccccgcttccccgcccccgccgccagaggcgacaagggcctcgcccaccccgccctg
cggcttttccaacgcccccgcgacggcttctggaccattcgcttcgacgggagctgcgca
gacaatggctccgctttcgcctctgggaagtgggggtttctgatcctcgacgccgccggc
cgacccgtccgccgcaagtccggcgacaccgtcgccgccgccgtcaccaacaacgtctcc
gaatggcgaagcgtcgccgaggccgtccgcgaaatcgaggcggggcctcgcccgacgggt
ctgctcttcgaaggcgactcccgcctcgtcgtcgagcagctcacgggggcgtgggcgtcg
aagaaggcggagctgacggcgatccgcgacgaggtccgcgacgccctcgcccgcgtcggc
ctcccgtgggcggcgaagtggataccccgcgaggagaactcggaagccgatgagttgacc
cgtcccgagacgccgatcgaggattggtcggcgtggccggaggcggaggagacggtgatc
gaggagccggagccgacgcccgcgacggctcccccgaccactccggcgaaggagcaggcg
tcggagttgacgacggcgggggacccggcccggctgcggctcttcttggtcgtcgcccgt
tctgcggcggaggcgagggcactgacgggggcgggggacggggatcgggtcgaggaggtg
acgctgacggcggcaaaggtactgctaagcgttggcggggtcggctaa
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