KEGG   Lynx rufus (bobcat): 124501387
Entry
124501387         CDS       T08475                                 
Name
(RefSeq) DNA dC->dU-editing enzyme APOBEC-3H
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf03250  Viral life cycle - HIV-1
lruf05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    124501387
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    124501387
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lruf03019]
    124501387
Messenger RNA biogenesis [BR:lruf03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     124501387
SSDB
Motif
Pfam: APOBEC2 NAD2 APOBEC3 NAD1 SNAD4 APOBEC_N APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 FANCL_C AID Treslin_N MafB19-deam Spectrin_Anc-1 Pep1_7
Other DBs
NCBI-GeneID: 124501387
NCBI-ProteinID: XP_046921472
LinkDB
Position
Unknown
AA seq 193 aa
MNPLQEDIFYRQFGNRHRVPKPYYRRKTYLCYQLKLPEGTLIDKDCLRNKKKRHAEMCFI
DKIKSLTRDTSQRFEIICYITWSPCPFCAEELVAFVKDNPHLSLQIFASRLYVHWHWKYQ
QGLRHLHASGIPVAVMSLPEFEDCWRNFVDHQDRPFQPWHNLDQYSQSIKRRLGKILTPL
NDLRNDFRNLKLE
NT seq 582 nt   +upstreamnt  +downstreamnt
atgaatccactacaggaagacatattctaccgtcagtttggcaaccggcaccgggtccca
aagccctactaccggaggaaaacctacttgtgctaccagctgaagctgcccgaaggcacc
ctaattgacaaagactgccttcgaaacaagaaaaagcgccatgcagaaatgtgctttatt
gacaagatcaagtcactgacgcgggacacatcccagagattcgaaatcatctgctatatc
acatggagcccctgccccttctgtgccgaggaactggttgcgtttgtcaaagacaacccc
cacctcagcctgcagatctttgcctcccgcctgtacgtccactggcactggaagtatcag
caggggctgagacacctgcacgcatccgggatcccagtggctgtcatgagcctcccagag
tttgaggactgctggaggaattttgtggaccaccaggacaggccgttccagccctggcac
aacctggaccaatacagtcaaagcataaaacgtaggctcgggaagatcctgacgcccctg
aatgatttaaggaatgacttcaggaatttgaaacttgaatga

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