KEGG   Lynx rufus (bobcat): 124502711
Entry
124502711         CDS       T08475                                 
Name
(RefSeq) apoptotic protease-activating factor 1 isoform X1
  KO
K02084  apoptotic protease-activating factor
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf01524  Platinum drug resistance
lruf04115  p53 signaling pathway
lruf04210  Apoptosis
lruf04215  Apoptosis - multiple species
lruf05010  Alzheimer disease
lruf05012  Parkinson disease
lruf05014  Amyotrophic lateral sclerosis
lruf05016  Huntington disease
lruf05020  Prion disease
lruf05022  Pathways of neurodegeneration - multiple diseases
lruf05134  Legionellosis
lruf05152  Tuberculosis
lruf05160  Hepatitis C
lruf05161  Hepatitis B
lruf05162  Measles
lruf05164  Influenza A
lruf05168  Herpes simplex virus 1 infection
lruf05169  Epstein-Barr virus infection
lruf05200  Pathways in cancer
lruf05222  Small cell lung cancer
lruf05417  Lipid and atherosclerosis
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04210 Apoptosis
    124502711
   04215 Apoptosis - multiple species
    124502711
   04115 p53 signaling pathway
    124502711
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124502711
  09162 Cancer: specific types
   05222 Small cell lung cancer
    124502711
  09172 Infectious disease: viral
   05161 Hepatitis B
    124502711
   05160 Hepatitis C
    124502711
   05164 Influenza A
    124502711
   05162 Measles
    124502711
   05168 Herpes simplex virus 1 infection
    124502711
   05169 Epstein-Barr virus infection
    124502711
  09171 Infectious disease: bacterial
   05134 Legionellosis
    124502711
   05152 Tuberculosis
    124502711
  09164 Neurodegenerative disease
   05010 Alzheimer disease
    124502711
   05012 Parkinson disease
    124502711
   05014 Amyotrophic lateral sclerosis
    124502711
   05016 Huntington disease
    124502711
   05020 Prion disease
    124502711
   05022 Pathways of neurodegeneration - multiple diseases
    124502711
  09166 Cardiovascular disease
   05417 Lipid and atherosclerosis
    124502711
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    124502711
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 WD40 Beta-prop_THOC3 WD40_Prp19 WD40_WDHD1_1st APAF1_C WD40_CDC20-Fz Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 Beta-prop_TEP1_2nd Beta-prop_WDR36-Utp21_2nd EIF3I WD40_Gbeta NB-ARC WHD_APAF1 WD40_MABP1-WDR62_2nd Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR75_1st Beta-prop_IFT122_1st WDR90_beta-prop_4th NBCH_WD40 CARD Beta-prop_EIPR1 Beta-prop_RIG_2nd WD40_MABP1-WDR62_1st Beta-prop_WDR41 Beta-prop_Vps41 Beta-prop_Aladin Beta-prop_TEP1_C Beta-prop_WDR19_1st RMC1_N Beta-prop_IFT140_1st Beta-prop_WDR35_TULP_N eIF2A Beta-prop_NUP159_NUP214 Beta-prop_HPS5 Beta-prop_VPS8 WD40_RFWD3 WD40_like Ge1_WD40 Beta-prop_WDR11_2nd Tricorn_2nd Beta-prop_DCAF4 PEP5_VPS11_N CARD_2 Beta-prop_Nup120_160 Beta-prop_ACSF4 Beta-prop_DCAF12 Utp8_b_propeller AAA_16 Hira Beta-prop_RSE1_2nd AAA_22 NPHP3_N NACHT nSTAND6 DUF2677 ATPase_2 AAA_18
Other DBs
NCBI-GeneID: 124502711
NCBI-ProteinID: XP_046923392
LinkDB
Position
Unknown
AA seq 1250 aa
MDAKARNCLLQHREALEKDIKTSYIMDCMINDGVLTVSEEEKVKNEPTQQQRAALLIKMI
LKKDNYSYISFYNALIHEGYKDLAGLLHGGIPVISSSNGGKDSVGGITSYVRTVLCEGGV
PQRPVVFVTRKKLVNSIQQNLFKLNGEPGWVIIYGMAGCGKSVLAAETVRDHSFLDGCFP
GGVHWVSVGKQDKSGLLMKLQNLCARLDQDESFSQRLPLNIEEAKDRLRILMLRKHPRSL
LILDDVWDPWVLKAFDNQCQILITTRDKSVTDSVMGPKYVVSVESGLGKEKGLEILSLFV
NMKKADLPEQAHSIIKECKGSPLVVSLIGALLRDFPNRWDYYLRQLQNKQFKRIRKSSFY
DYEALDEAMSISVEMLREDIKDYYTDLSILQKDVKVPTKVLCILWDMETEEVEDILQEFV
NKSLLFCDRNGKSFCYYLHDLQVDFLIEKNRNQLQDLHKKLITQFQRHHQPHTLSPDQED
CMYWYNFLAYHMASANMHKELCALMFSLDWIKAKTELVGPAHLIHEFVEYRHILDEKDCA
VCENFQEFLSLNGHLLGRQPFPNIVQLGLCEPETSEVYQQAKLQAKQEVDNGMLYLEWIN
KKNNKNLSRLVVRPHTDAVYHACFSEDGQRIASCGVDKTLQVFKAETGEKLLEIKAHEDE
VLCCAFSADDRFIATCSVDKKVKIWNSMTGELVHIYDEHSEQVNCCHFTNNSHHLLLATA
SSDCFLKLWDLTQKECRNTMFGHTNSVNHCRFSPDDKLLASCSADGTLKLWDVKSANERE
SINVKQFFLNSEEPQEDMEVIVKCCSWSADGARIMVAAKNKIFLFDIHASGLLAEIHTGH
HSTIQYCDFSPQNRLAVVALSQCCVELWNMDSCLKVADCRGHLSWVHCVMFSPDGSSFLT
SSDDQTIRLWETKKVCENSAIVLKQDIDVVFQENEVMVLAVDNVRHLQLINGKTGQTDYL
TEAQVSCCCLSPHLEYIAFGGEDGAIEILELLNNRIFQSRIGHKKTVRHIQFTDDGKTLI
SSSDDSSIQVWNWQSEEYVFLQAHQETVKDFRLLKNSRLLSWSFDGTVKVWSIITGRIEK
DFVCHQDTVLSCDISPDATKFSSTSADKTAKIWSFELLSPLHELRGHKGCVRCSAFSVDS
TLLATGDDNGEIRIWNVSNGELLHLCAPISVEEGAATHGGWVTDLCFSPDSKMLVSAGGY
LKWWSVDTGESSQTFYTNGTNLKKIHVSPDFKTYVTVDNLGILYILQMLE
NT seq 3753 nt   +upstreamnt  +downstreamnt
atggatgcaaaagctcgaaactgtttgcttcaacatagagaagccctggaaaaggacatt
aaaacgtcctacatcatggattgtatgattaatgatggagttttaacagtatcagaggag
gaaaaagtaaaaaatgagcccactcagcagcaacgagcagctctcctaattaaaatgata
cttaaaaaagataattattcctacatatcattctacaatgctctaatacatgaagggtat
aaagatcttgctggccttcttcatggtggcattcctgtcatctcttcttcgaatggtggc
aaagattcagttggtggaataacttcatatgtaaggacagtcctgtgtgaaggtggagtg
ccacagaggccggtggtctttgttacgaggaagaaactggtgaactcaattcagcagaac
ctcttcaaactaaatggtgaaccaggatgggtcatcatatacggaatggcaggttgtggg
aagtctgttttagctgcagaaactgttcgagatcattctttcttagatggttgtttccca
gggggtgtgcactgggtttcagttgggaaacaagacaagtctgggcttctgatgaaactg
cagaatctttgcgcacggttggatcaggatgagagtttctcccagaggcttccactcaat
attgaagaggctaaagaccgccttcgcattctgatgctgcgtaaacacccacggtctctg
ttgatcttggatgatgtttgggatccttgggtattaaaagcttttgacaatcagtgtcag
attcttattacaaccagagacaagagtgttacagattcagtaatgggtcctaaatatgta
gtctctgtggagagtggcttaggaaaagaaaaaggacttgaaattttatccctttttgtt
aatatgaagaaagcagatttgccagaacaagctcacagtattataaaagaatgtaaaggt
tctcctcttgtagtgtctttgattggtgcacttttacgtgattttcccaaccgttgggat
tactaccttaggcaacttcagaataagcaatttaagagaataaggaaatcttcattttat
gattatgaggctctggatgaagccatgtctataagcgttgaaatgctcagagaggacatc
aaagattattatacagatctttccatccttcagaaggatgttaaggtgcctacaaaggtg
ttatgtattctctgggacatggaaaccgaagaagttgaagacatactgcaggagtttgtt
aataagtctctcttattctgtgatcggaatggaaaatcattttgttattatttacatgat
cttcaagtagatttccttatagaaaagaatcgcaaccagcttcaggatctacataagaag
ttaatcactcagttccagagacatcaccagccacatactctttcaccagatcaggaggac
tgcatgtattggtacaattttctggcttaccacatggctagtgctaacatgcacaaagaa
ctttgtgctttaatgttttccctggattggattaaagcaaaaactgaactcgtaggccct
gcccatctgattcatgaatttgtggaatataggcatatattggatgaaaaggattgtgca
gtctgtgaaaatttccaagagtttttatcattaaatggacaccttcttggacgacagcca
tttcctaatattgttcaactgggtctctgtgaaccagaaacttcagaagtttatcagcaa
gctaagctgcaggccaagcaggaggtcgataatggaatgctttacctggagtggataaac
aaaaaaaacaacaagaatctttcccgcttagttgtccgcccccatacagatgctgtttac
catgcttgcttttctgaggatggtcaaagaatagcttcttgtggagttgataaaacctta
caggtgttcaaagctgaaacaggagagaaacttctggaaatcaaggctcatgaggatgaa
gtgctttgttgtgcattctctgcagatgacagattcatagcaacctgctcagtggataaa
aaagtgaagatttggaattctatgactggggaactagtacatatctatgatgagcactca
gagcaagtcaattgctgccactttaccaacaacagtcatcaccttctcttagccactgcg
tcaagtgactgtttcctcaaactgtgggatttgacccaaaaagagtgtcggaataccatg
tttggccacacaaattcagtcaatcactgcagattttcaccagatgataagcttttggct
agttgttcagctgatggaacattaaagctttgggatgtgaaatcagcaaacgagagggaa
agcattaatgtgaagcaattcttcctaaattcagaggagcctcaagaggatatggaagtg
atagtgaaatgttgttcatggtctgctgatggtgctaggataatggtggcagcaaaaaat
aagatctttctttttgacattcatgccagtggcctgttggcagaaatccatacaggccat
catagcaccatccagtactgtgacttctccccacaaaatcgtttggcagtggtggctttg
tcccagtgctgtgtagagttgtggaacatggactcgtgtttaaaagtggctgactgcaga
ggacatttaagttgggttcattgtgtgatgttttctcctgatggatcatcatttttgaca
tcttctgatgaccagacaatcaggctctgggagacaaagaaagtatgtgagaactctgct
atagtgttaaagcaagacatagatgttgtgtttcaagaaaatgaagtgatggttcttgca
gttgacaatgtaagacatctgcagctcattaatggaaaaacaggtcagactgattatctg
acagaagctcaagttagttgctgttgcttaagtccacatcttgagtacattgcatttgga
ggcgaagatggagccattgagattttagaactcctaaacaacagaatcttccaatccagg
attgggcacaagaaaactgtacggcacatccagttcacagatgatgggaaaactcttatt
tcaagctctgatgattcttcaattcaggtgtggaattggcaatcagaggaatatgtcttt
ctacaagcccatcaggaaacagtgaaagactttaggctcttgaaaaattcaagactgctt
tcctggtcatttgatggaacagtgaaggtgtggagtattattactggaagaatagaaaaa
gattttgtctgtcaccaagatacagtactttcttgtgatatttctcctgatgctactaag
ttttcatctacatctgctgacaagactgcaaagatttggagttttgaacttctttcccct
cttcatgagctgaggggccacaaaggctgtgtgcgctgctctgccttctctgtggacagt
accctgttggcgactggagatgacaatggagaaatcaggatatggaatgtctcaaatggt
gagctgcttcatttatgcgctccgatttcagtagaagaaggagctgctacccatggaggc
tgggtgactgacctttgcttttcaccagatagcaaaatgcttgtctctgctggaggatat
cttaagtggtggagtgttgacactggggaatcctcacagaccttctacacaaatggaacc
aatcttaagaaaatacacgtgtctcctgacttcaaaacatatgtgactgttgataatctt
ggtattttatatattttacagatgttagagtaa

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