Lynx rufus (bobcat): 124503402
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Entry
124503402 CDS
T08475
Name
(RefSeq) matrix metalloproteinase-9
KO
K01403
matrix metalloproteinase-9 (gelatinase B) [EC:
3.4.24.35
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf01522
Endocrine resistance
lruf04657
IL-17 signaling pathway
lruf04668
TNF signaling pathway
lruf04670
Leukocyte transendothelial migration
lruf04915
Estrogen signaling pathway
lruf04926
Relaxin signaling pathway
lruf05161
Hepatitis B
lruf05200
Pathways in cancer
lruf05202
Transcriptional misregulation in cancer
lruf05205
Proteoglycans in cancer
lruf05206
MicroRNAs in cancer
lruf05215
Prostate cancer
lruf05219
Bladder cancer
lruf05415
Diabetic cardiomyopathy
lruf05417
Lipid and atherosclerosis
lruf05418
Fluid shear stress and atherosclerosis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04668 TNF signaling pathway
124503402
09150 Organismal Systems
09151 Immune system
04657 IL-17 signaling pathway
124503402
04670 Leukocyte transendothelial migration
124503402
09152 Endocrine system
04915 Estrogen signaling pathway
124503402
04926 Relaxin signaling pathway
124503402
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
124503402
05202 Transcriptional misregulation in cancer
124503402
05206 MicroRNAs in cancer
124503402
05205 Proteoglycans in cancer
124503402
09162 Cancer: specific types
05219 Bladder cancer
124503402
05215 Prostate cancer
124503402
09172 Infectious disease: viral
05161 Hepatitis B
124503402
09166 Cardiovascular disease
05417 Lipid and atherosclerosis
124503402
05418 Fluid shear stress and atherosclerosis
124503402
05415 Diabetic cardiomyopathy
124503402
09176 Drug resistance: antineoplastic
01522 Endocrine resistance
124503402
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lruf01002
]
124503402
Enzymes [BR:
lruf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.35 gelatinase B
124503402
Peptidases and inhibitors [BR:
lruf01002
]
Metallo peptidases
Family M10
124503402
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_M10
fn2
Hemopexin
PG_binding_1
PT
Reprolysin_3
Reprolysin_4
DUF4953
Peptidase_M66
Motif
Other DBs
NCBI-GeneID:
124503402
NCBI-ProteinID:
XP_046924386
LinkDB
All DBs
Position
Unknown
AA seq
705 aa
AA seq
DB search
MSPRQPLVLALLVLGCCTAAPRPRKPTVVVFPGDVRTNLTDRQLAEEYLYRYGYTHVAEM
SDDQQSLSRGLRLLQRRLALPETGELDRTTLEAIRTPRCGVPDLGKFQTFEGDLKWHHHN
ITYWIQNYSEDLPRDVIDDAFARAFAAWSAVTPLTFTRVYGFEADIVIQFGVREHGDGYP
FDGKDGLLAHAFPPGPGIQGDAHFDDEELWSLGKGVVVPTYFGNAGGAACHFPFTFEGRS
YSACTTDGRSDDMLWCSTTADYDTDRRFGFCPSERLYTRDGNGEGKPCVFPFTFEGRSYS
ACTTEGRSDGYRWCATTANYDQDKLYGFCPTRADSTVTGGNSAGELCVFPFIFLGKEYST
CTREGRGDGHLWCATTSNFDRDKKWGFCPDQGYSLFLVAAHEFGHALGLDHSSVPEALMY
PMYSFTEGPPLHEDDVKGIQHLYGPRPEPEPRPPTTTTPESQPTVCTTGPPTTRPPERPT
AGPTGPPSAGPTGPPTAGPSEAPTVSLDPAEDVCNVNIFDAVAEIGNLLHFFKDGKYWQF
SENPGRRVRGPFLITNKWPALPRKLDSAFEDPLTKKTFFFSGRQVWVYTGASVLGPRRLD
KLGLGPEVAQITGALPRSGGKVLLFSRQRFWRFDVKTQTVDPKSAGQVEQMFPGVPLNTH
DIFQYQEKAYFCQDRFYWRVSSRNEVNQVDQVGYVTFDLLQCPED
NT seq
2118 nt
NT seq
+upstream
nt +downstream
nt
atgagccccaggcagcccctggtcctggcgctcctggtgctgggctgctgcaccgccgct
cccagaccacgcaagcccaccgttgtggtcttcccaggagacgtgcgaactaatctcact
gacaggcagctggcagaggaatatctgtatcgctatggctatactcatgtggcggagatg
agcgacgaccagcagtccctgagtcggggactgcggcttctccagaggcgcctggctctg
cctgagactggcgaactggacagaaccaccctggaggccatacgaaccccgcgctgcggc
gtcccagacctgggcaaattccagacctttgagggtgacctcaagtggcatcaccacaac
atcacgtactggatccaaaactactcggaagacttgccgcgcgacgtgatcgacgacgcc
tttgcccgcgcctttgcggcctggagcgcggtgacgccgctcaccttcacgcgcgtgtat
ggcttcgaggcagacatcgtcatccagtttggtgtcagggagcacggagatgggtacccc
ttcgatgggaaagacgggctcctggcacacgcctttcctcccggcccaggcattcaggga
gacgcccacttcgacgatgaggaattgtggtctctgggcaagggcgtagtggttcccacc
tacttcggaaacgcaggtggcgccgcctgccacttccctttcaccttcgagggccgctcc
tactcggcctgcaccacggacggccgctccgacgacatgctctggtgcagcaccaccgcc
gactacgacaccgaccgccggttcggcttctgccccagcgagagactctacacccgggac
ggcaatggagagggcaagccctgcgtgtttccgttcaccttcgagggccgctcctactcc
gcctgcaccaccgagggtcgctcagacggctaccgctggtgcgccactacggccaactac
gaccaggacaagctctatgggttctgcccaacccgagctgactctacagtgaccggtggc
aactccgctggggagctgtgtgtctttcccttcatcttcctgggcaaggagtactcaaca
tgcaccagggagggccgcggagatgggcacctctggtgcgccaccacctcgaacttcgac
agagacaagaagtggggcttctgcccggaccaaggatacagcttgttccttgtggcagcc
catgaattcggccatgctctgggtttagatcactcatcggtgccagaggcactcatgtac
cccatgtacagcttcacggagggcccccccctgcatgaggacgatgtgaaaggcatccag
catctgtacggtcctcgccctgaacctgaaccacggcctccaaccaccaccacacctgaa
tcccagcccacggtctgcactacggggcctcccaccacccgccccccagagcgccccact
gctggccccacaggccccccttcagctggccccacgggtccccccactgctggcccttct
gaggcccctacagtgtctttggatccagcagaagatgtgtgcaacgtgaacattttcgat
gctgttgcggagatcgggaatcttctgcatttcttcaaggatgggaagtactggcagttc
tctgagaacccaggacgccgggtgcggggccccttccttatcaccaacaagtggcctgcg
ttgccccgcaagctggactccgcctttgaggacccgctgaccaagaagactttcttcttc
tctgggcgccaggtgtgggtgtacacaggcgcgtcggtgctcggcccgaggcgtctggac
aagctgggcctgggcccggaggtggcccaaatcactggggccctcccgcgcagcgggggt
aaggtgctgctcttcagcaggcagcgcttctggaggttcgacgtgaagacgcagaccgtg
gatcccaagagcgccggccaggtggagcagatgttccccggcgtgcccttgaacacgcac
gacatctttcagtaccaagagaaagcttacttctgccaggaccgcttctattggcgtgtg
agttctcggaacgaggtgaaccaggtggaccaagtgggctatgtgacctttgacctcctg
cagtgccccgaggattag
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