KEGG   Lynx rufus (bobcat): 124507266
Entry
124507266         CDS       T08475                                 
Name
(RefSeq) platelet-derived growth factor receptor beta isoform X1
  KO
K05089  platelet-derived growth factor receptor beta [EC:2.7.10.1]
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf01521  EGFR tyrosine kinase inhibitor resistance
lruf04010  MAPK signaling pathway
lruf04014  Ras signaling pathway
lruf04015  Rap1 signaling pathway
lruf04020  Calcium signaling pathway
lruf04072  Phospholipase D signaling pathway
lruf04151  PI3K-Akt signaling pathway
lruf04510  Focal adhesion
lruf04540  Gap junction
lruf04630  JAK-STAT signaling pathway
lruf04810  Regulation of actin cytoskeleton
lruf05165  Human papillomavirus infection
lruf05200  Pathways in cancer
lruf05206  MicroRNAs in cancer
lruf05214  Glioma
lruf05215  Prostate cancer
lruf05218  Melanoma
lruf05230  Central carbon metabolism in cancer
lruf05231  Choline metabolism in cancer
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04010 MAPK signaling pathway
    124507266
   04014 Ras signaling pathway
    124507266
   04015 Rap1 signaling pathway
    124507266
   04630 JAK-STAT signaling pathway
    124507266
   04020 Calcium signaling pathway
    124507266
   04072 Phospholipase D signaling pathway
    124507266
   04151 PI3K-Akt signaling pathway
    124507266
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    124507266
   04540 Gap junction
    124507266
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    124507266
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124507266
   05206 MicroRNAs in cancer
    124507266
   05230 Central carbon metabolism in cancer
    124507266
   05231 Choline metabolism in cancer
    124507266
  09162 Cancer: specific types
   05214 Glioma
    124507266
   05218 Melanoma
    124507266
   05215 Prostate cancer
    124507266
  09172 Infectious disease: viral
   05165 Human papillomavirus infection
    124507266
  09176 Drug resistance: antineoplastic
   01521 EGFR tyrosine kinase inhibitor resistance
    124507266
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01001 Protein kinases [BR:lruf01001]
    124507266
  09183 Protein families: signaling and cellular processes
   04090 CD molecules [BR:lruf04090]
    124507266
Enzymes [BR:lruf01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.10  Protein-tyrosine kinases
    2.7.10.1  receptor protein-tyrosine kinase
     124507266
Protein kinases [BR:lruf01001]
 Receptor tyrosine kinases (RTK)
  PDGFR family [OT]
   124507266
CD molecules [BR:lruf04090]
 Proteins
  124507266
SSDB
Motif
Pfam: PK_Tyr_Ser-Thr Pkinase Ig_3 ig I-set Ig_2 V-set VEGFR-1-like_Ig-like VEGFR1-3_N_Ig-like Haspin_kinase
Other DBs
NCBI-GeneID: 124507266
NCBI-ProteinID: XP_046929644
LinkDB
Position
Unknown
AA seq 1038 aa
MSQKPLQKTAKNQDGTFSSTLTLTNVTGLDTGEYFCTYKNSLGPEPAERKRLYIFVPDPT
MGFLPVFPEDLFIFLTEISEITIPCRVTDPSLVVTLHEKKVDIPLPIPYDHQRGFSGIFE
DKTYVCKTIIGDREVDSEAYYVYSLQVSSINVSVNAVQTVVRQGENITIMCIVTGNEVVN
FEWTYPRMESGRLVEPVTDFLFNVPSHIRSILHIPNAELGDSGTYICNVSESVNDHRDEK
SINVTVVESGYVQLLGELDAVQFAELHRSRTLQVLFEAYPPPTVMWLKDNRTLGDSSAGE
IALSTRNVSETRYVSELTLVRVKVAEAGYYTMRAFHEDAEAQISFQLQVNVPVRVLELSE
NHPASGEQTVRCRGRGMPQPHLTWSTCSDLKRCPRELPPTPLGNSSEEDSQLETNVTYWP
EDQEFEVVSTLRLRRVDQPLSVRCTLHNLLGHDMQEVTVVPHSLPFKVVVISAILALVVL
TIISLIILIMLWQKKPRYEIRWKVIESVSSDGHEYIYVDPMQLPYDSTWELPRDQLVLGR
TLGSGAFGQVVEATAHGLSHSQATMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNV
VNLLGACTKGGPIYIITEYCRYGDLVDYLHRNKHTFLQRCSDKRRPPSAELYSNALPAGL
PLPSHVSLPGESDGGYMDMSKDESVDYVPMLDMKGGIKYADIESSSYVAPYDNYVPTAPE
RTCRATLINESPVLSYTDLVGFSYQVANGMEFLASKNCVHRDLAARNVLICEGKLVKICD
FGLARDIMRDSNYISKGSTFLPLKWMAPESIFNSLYTTLSDVWSFGILLWEIFTLGGTPY
PELPMNEQFYNAIKRGYRMAQPAHASDEIYEIMQKCWEEKFEIRPPFSQLVLLLERLLGE
GYKKKYQQVDEEFLRSDHPAVLRSQARFPGFNGLRSPLDTSSVLYTAVQPNESDNDYIIP
LPDPKPEIADEGPLEGSPSLASSTLNEVNTSSTISCDSPLEPQEEPEPEPQLEPQVEPEP
PLDSCCPGPRAEAEDSFL
NT seq 3117 nt   +upstreamnt  +downstreamnt
atgtcccagaagcccctgcagaaaacggccaagaaccaggatggcaccttctccagcaca
ctgacactgaccaatgtcactgggctagacacgggagaatacttttgcacctacaaaaac
tccctcgggccggagcctgctgagcgaaaacggctctacatctttgtgccagatccgact
atgggctttcttcccgtcttccccgaggacctgttcatctttctcacggaaatatctgag
atcacaattccctgccgagtgacggatccgagcctggtggtgacactgcacgagaagaaa
gtggatattccactgcccatcccctatgaccaccaacgtggcttctctggtatcttcgag
gacaagacctatgtctgcaaaaccatcatcggggacagggaagtggattctgaagcctac
tatgtctacagtctccaggtgtcgtccatcaatgtctcagtgaatgcagtgcagactgtg
gtccgccagggtgagaacatcaccatcatgtgcattgtgaccggaaatgaggtggtcaac
tttgaatggacatacccacgcatggagagtgggcggctggtggagccagtgactgacttc
ctcttcaatgtaccctcccacatacgctccatcctgcacatccctaatgccgagcttggc
gattcagggacctacatctgcaatgtatcggagagtgtgaatgaccatcgagatgaaaag
tccatcaatgtcactgtggttgagagtggctacgtgcagctgctgggagagctggacgcc
gtacaattcgcggagctgcaccgcagccggactctgcaggtgctgttcgaggcctacccg
ccgcctactgtcatgtggctcaaggacaaccgcacgctaggcgactccagcgcaggcgag
attgccctgtccacacgcaatgtgtctgagacccggtatgtgtcagaactgacattggtg
cgggtgaaggtggctgaggctggctactacaccatgcgggccttccacgaggatgcagag
gcccagatctccttccagctgcaggtcaatgtgcctgtccgtgtgctggagctaagtgaa
aaccatcctgccagcggggagcagacagtccgctgtcgcggccggggcatgccccagcca
cacctcacctggtctacctgcagtgacctcaaaagatgtccgcgcgagctgccgcccacc
ccactggggaacagttccgaggaggacagccagctggagactaacgtgacttactggcct
gaggatcaggagtttgaggtggtgagcacgctccgcctgcgccgtgtggatcagcctctg
tccgtgcgctgcactctgcacaacctgctgggccacgacatgcaggaggtcaccgtggtg
ccacattctctgcccttcaaggtggtggtgatctcggccatcctggccttggtggtcctc
acaatcatctccctcatcatcctcatcatgctctggcagaagaagccacgttatgagatc
cgatggaaggtgattgaatctgtgagctctgatggccatgagtacatctacgtggaccct
atgcagctgccctatgactctacctgggagctgccacgggaccagcttgtgcttggacgc
accctcggctctggggcctttgggcaggtggtggaggccacagctcacggcctgagccat
tctcaggccacaatgaaagtggcggtcaagatgctgaaatccacagcccgcagcagcgag
aagcaggccctcatgtcagagctgaagatcatgagtcaccttgggccccatctgaacgtg
gtcaacttgctgggggcctgcaccaaaggaggacccatctacatcatcacggagtactgc
cgctacggtgacctggtggactaccttcaccgcaacaagcacaccttcctgcagcgctgc
tctgacaagcgccgcccgcccagcgccgagctctacagcaacgccctgcccgcggggctc
cctctgcccagccacgtgtccctgcctggggagagtgacggcggctacatggacatgagc
aaggacgagtcggtggactacgtgcccatgctggacatgaaaggaggaatcaaatatgca
gacattgagtcctccagctacgtggccccttatgacaactacgtccccacagctcccgag
aggacctgtcgggcaactctgatcaacgagtccccggtgcttagctacacagatcttgtg
ggcttcagctaccaggtggctaatggcatggagttcctggcctccaagaactgcgtccac
cgagatctggcagccaggaacgtgctcatctgtgagggcaagctggtcaagatctgtgac
tttggcctggctcgtgacatcatgagggactcgaactatatctccaaaggcagcaccttc
ctgcctctgaagtggatggctcccgagagcatcttcaacagcctctataccaccctgagt
gatgtgtggtccttcgggatcctactctgggagatcttcaccctgggtggcaccccttac
ccagagctgcccatgaatgagcagttctataatgccatcaagcggggttaccgaatggcc
cagcctgcccatgcctccgatgagatctacgagatcatgcagaagtgctgggaagagaag
tttgagatccggcctcccttctcccagctggtgctgcttctcgagaggctgctgggtgag
gggtacaagaagaagtaccagcaggtggatgaggagtttctgaggagcgaccacccagcc
gtccttcggtcccaagcccgctttcccggcttcaatggactccgatcccccctggacacc
agctctgtgctctacactgctgtgcagcccaacgagagtgacaatgactatatcatcccc
ctgcctgaccccaaacccgagattgctgatgagggtcccctggagggttcccccagcctt
gccagctccaccctgaatgaagtcaacacctcctctaccatctcctgcgacagccccctg
gaaccccaagaggagccagagccagagccccagctcgagccccaggtggagccagagcca
ccactggattcatgttgccctgggcctcgggccgaggcggaggacagcttcctgtag

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