Lynx rufus (bobcat): 124507638
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Entry
124507638 CDS
T08475
Name
(RefSeq) isoleucine--tRNA ligase, cytoplasmic-like
KO
K01870
isoleucyl-tRNA synthetase [EC:
6.1.1.5
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
124507638
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
lruf01007
]
124507638
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lruf03016
]
124507638
Enzymes [BR:
lruf01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.5 isoleucine---tRNA ligase
124507638
Amino acid related enzymes [BR:
lruf01007
]
Aminoacyl-tRNA synthetase
Class I (U)
124507638
Transfer RNA biogenesis [BR:
lruf03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
124507638
Prokaryotic type
Other AARSs
124507638
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_1
Ubiquitin_IARS1
Anticodon_1
DUF5915
tRNA-synt_1g
Plectin_PPL
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
124507638
NCBI-ProteinID:
XP_046929873
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MVQQVPENINFPAEEEKILQFWSEFNCVQECLKQSKHKPKFTFYDGPPFATGLPHYGHIL
AGTIKDIVTRYAHQSGFHVDRRFGWDCHGLPVEYEIDKTLGIRGPEDVAKMGIVEYNNQC
RAIVMRYSTEWKSTVTRLGRWIDFDNDYKTLYPQFMESVWWVFKQLYDKGLVYRGVKVMP
FSTACNTPLSNFESHQNYKDVQDPSVFVTFPLEEDENVSLVAWTTTPWTLPSNLALCVNP
DMQYVKIKDVIRGKLLILMEARLPALYKLETDYEVLERFPGSCLKGKKYRPLFDYFVQCK
ENGAFTVLTDSYVREEEGTGVVHQVPYFGADDYRVCMDFSIIQKDSPPVCPVDASGCFTA
EVTDFTGQYVKDADKNIIRTLKEKGRLLVASTFTHSYPFCWRSDTPLIYKAVPSWFVRVE
HMVDQLLKNNDLCYWVPEFVREKRFGNWLKDARDWAISRNRYWGTPIPLWVSDDFEEVVC
IGSMAELEELSGAKVSDLHRESIDHLTIPSRCGKGVLRRISEVFDCWFESGSMPYAQVHY
PFENKREFDDAFPADFIAEGIDQTRGWFYTLLVLATALFGQPPFRNVIVNGLVLASDGQK
MSKRKKNYPDPLSIIHKYGADALRLYLINSPVVRAENLRFKEEGVRDVLKDVLLPWYNAY
RFFIQNVLRLQKEEEMEFLYNENTVKESANVTDRWVLSCMQSLVGFFETEMAAYRLYTVV
PRLVKFVDVLTNWYVRMNRRRLKGENGVEDCVMALETLFSVLLSLCRLMAPYTPFLTELM
YQNLKLLIDPGSVQDKDTLSIHYLMLPHVREELIDKNTESAVSRMQSVIELGRVIRDRKT
IPIKYPLKEIVVIHQDPEALNEIKSLEKYIIEELNVRKVTLSTDKNKYGIRLRAEPDHMV
LGKRLKGAFRAVMTAIKQLSSEELERFQETGTIVVEGHELHEEDIRLMYTFDQTAGGTTQ
YEAHSDAQALVLLDVTPEQSMVDEGVAREVINRIQKLRKKCNLVPTDEITVYYKAKSEGK
YLNNVIESHTEFIFATIKAPLKPYPVPLSDNILIQEKTQLKGSDLEITLTRGSSPPGPAC
AYVNLNICTNGREQGGVLLLENPKGDNRLDLLKLKSVITSIFGVKNTELAVLHGETEIRN
QTDLLSLSGKTLRVAAGSAPAVVDGPGSALCRYINLQLLNSGPQECVKGTVGTLLLENPP
GQNGLTHQGLLYEAAKVFGLRSRKLKLFLNEAQTDEITEEIPMKTLNMKTVYVSVLPTTA
DI
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggttcagcaagttccagaaaacatcaattttcctgctgaagaagaaaaaatcttgcag
ttctggtccgaatttaattgtgttcaggaatgcttaaagcagtcaaaacacaagccaaaa
tttacgttctatgatgggcctccttttgcaactggactgcctcactatggacatatactt
gcagggacaattaaagatatagttaccagatatgctcaccagagtggatttcacgttgac
agaaggtttggatgggattgtcacggcttacctgtggaatatgaaattgataagacactg
gggatcagaggaccagaggatgtagccaaaatggggatcgtagagtataacaatcagtgc
cgagcaattgtgatgagatattccactgagtggaagtctactgttaccagacttggccga
tggattgactttgacaatgactacaaaactctgtacccacaattcatggaatctgtctgg
tgggtcttcaaacagctctatgataagggccttgtgtacagaggtgtgaaagtcatgccc
ttctccaccgcatgcaacactccactctccaacttcgagtctcaccagaactacaaggat
gtacaagacccttcagtgtttgtaactttccctttggaggaagatgaaaatgtgtctttg
gtggcttggacaaccactccctggactctcccgagtaaccttgccctgtgtgttaatcca
gatatgcagtacgtgaagattaaagatgtcatcagaggaaaattgctcattttaatggaa
gccagattaccagccctgtataaactggaaactgactatgaagtccttgaaagatttcct
ggttcctgtctcaaaggcaagaagtacaggcccctgtttgactattttgtgcagtgcaag
gagaatggcgctttcacagtgctcaccgacagctacgtgcgggaggaggagggcactgga
gtggtgcaccaggttccgtactttggtgctgatgactatcgggtctgtatggacttcagc
atcattcagaaagactctcctcctgtttgccctgtggatgcttcaggctgtttcacagca
gaagtgacagatttcacaggacagtatgtgaaggatgctgacaaaaacatcatcaggacc
ctgaaagaaaaaggccgacttcttgttgctagcacctttactcacagctaccctttctgc
tggaggtcagacacccccctcatttacaaagcagtgcctagctggttcgtacgggtggag
cacatggtggaccagctgttgaagaacaatgacctgtgttactgggtcccagagtttgtg
cgagaaaagcgatttggaaattggctgaaagatgcacgtgactgggcaatttccagaaac
agatactggggcacccctatccccctgtgggtcagtgatgacttcgaggaggtagtatgc
attggatcaatggcagagcttgaagaactgtcaggagcgaaggtctctgatctccacaga
gagagcattgaccatctgaccatcccttcccgttgtgggaagggggtgttgcgtcgtatc
tctgaggtgtttgactgttggttcgagagtggcagcatgccctatgctcaagttcattat
ccatttgaaaacaagagggagtttgatgatgcatttcctgcagacttcattgccgaaggc
attgaccaaaccagaggatggttttacaccctgctggtgctggccacggctctcttcgga
cagccgcctttcaggaacgtgattgtgaacgggctcgtcctggccagtgatggccaaaaa
atgagcaagcgaaaaaagaattatccggatccactttcaatcatccataaatatggtgct
gacgccctcagattatatctgatcaactcccctgtggtgagagcagaaaacctccgcttt
aaggaggagggtgtgcgtgatgtcttgaaggacgtgctgctcccgtggtacaacgcctat
cgcttcttcatccagaacgtgctgaggctgcagaaggaggaagaaatggagttcctgtac
aatgagaacacggttaaagaaagtgccaacgtgacagaccgctgggtcctatcctgcatg
cagtcgctggttgggttctttgagaccgaaatggcagcttacaggctctatactgtagtg
cctcgcctggtcaagttcgtggatgtcctaaccaactggtacgtccggatgaaccgcaga
aggttgaagggcgaaaacggggtggaggactgtgtcatggccctggagaccttgttcagt
gttctgctgtctctgtgcaggctcatggccccctatacaccttttcttaccgaattgatg
taccagaatctaaagctgctgattgaccccggttctgtccaggacaaggacacactcagc
atccactacctcatgctgccccacgttcgggaggagctgattgacaagaacacagagagc
gcggtctctcggatgcagtctgtgattgagcttgggcgagtgattcgagaccgcaaaacc
attccgataaagtatcctttgaaagaaattgtggttatccaccaggatccagaagctctc
aatgagatcaaatctctggagaagtatatcattgaggagttgaatgttcgcaaagttaca
ctgtctacagataaaaacaagtatggcattcgcctaagggcagaacctgaccacatggtc
ctgggcaagcggctgaagggagccttcagggcggtgatgacggccatcaagcaactaagc
agcgaggagctagagcgtttccaggagactgggaccattgttgtcgaaggtcatgagctg
catgaagaggacatccgcctcatgtacacctttgaccagacagcaggagggacaacacag
tacgaagcgcactcagatgcccaggctttggttctcttagacgtcacccccgaacagtcc
atggtggatgaaggagtggctcgggaggtcatcaatcgcatccagaaacttcgcaaaaag
tgcaatctggttccgactgatgaaataacagtttactataaagctaagtctgaaggaaag
tatctgaataatgttatcgaaagccacacggagtttatatttgccaccataaaggctccc
ttgaaaccatacccagttccattatcagataacatccttattcaagaaaaaacacagtta
aagggatctgacctggaaattacactcaccagaggatcatccccgcctgggcctgcttgt
gcatatgtcaatcttaacatttgtacaaatggcagagagcaaggtggagtattgcttctg
gaaaatccaaaaggcgacaacaggctggaccttttaaagctgaagagtgtcattactagc
atttttggtgtaaaaaatacagagctggctgtcctccatggtgaaacagaaatacgaaac
caaactgacttactgagtcttagtggaaaaacactccgcgtggcagcaggctctgctccc
gccgtggtggacggccccggctccgccctctgccgctacatcaacctgcagctcctgaac
tcaggcccgcaagagtgtgtgaagggaaccgtgggcacgctcctgctggaaaacccccct
gggcagaacggactcacccaccagggcctcctgtatgaagcagccaaggtgtttggcctt
cgcagcaggaagctcaagttgtttctgaatgaggctcagacagatgaaattacagaagaa
atccccatgaagactttgaacatgaagactgtgtatgtttctgtgttaccgacaacggca
gacatctga
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