Lynx rufus (bobcat): 124510287
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Entry
124510287 CDS
T08475
Name
(RefSeq) presenilin-2 isoform X1
KO
K04522
presenilin 2 [EC:3.4.23.-]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04330
Notch signaling pathway
lruf04722
Neurotrophin signaling pathway
lruf05010
Alzheimer disease
lruf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124510287
09150 Organismal Systems
09156 Nervous system
04722 Neurotrophin signaling pathway
124510287
09160 Human Diseases
09164 Neurodegenerative disease
05010 Alzheimer disease
124510287
05022 Pathways of neurodegeneration - multiple diseases
124510287
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lruf01002
]
124510287
Peptidases and inhibitors [BR:
lruf01002
]
Aspartic peptidases
Family A22: presenilin family
124510287
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Presenilin
Motif
Other DBs
NCBI-GeneID:
124510287
NCBI-ProteinID:
XP_046933083
LinkDB
All DBs
Position
Unknown
AA seq
465 aa
AA seq
DB search
MLTFMASDSEEEVCDERASLMSAESPPPRCCQEDRQGLEDGEGADQWRGQDSEDDFDEDP
DHYVCGGVPGQPSGLEEELTLKYGAKHVIMLFVPVTLCMIVVVATIKSVRFYTEKNGQLP
YGAGREQSLQPAVSLSIYTPFTEDTPSVGQRLLNSVLNTLIMISVIVAMTIFLVVLYKYR
CYKFIHGWLIMSSLMLLFLFTYIYLGEVLKTYNVAMDYPTLFLTVWNFGAVGMVCIHWKG
PLVLQQAYLIMISALMALVFIKYLPEWSAWVILGAISVYDLVAVLCPKGPLRMLVETAQE
RNEPIFPALIYSSAMVWTVGMAKLDPSSQGALQLPYDPEMEEDSYDSFGEPSYPEVFEPP
LPGYPGDDLEEEEERGVKLGLGDFIFYSVLVGKAAATGSGDWNTTLACFVAILIGLCLTL
LLLAVFKKALPALPISITFGLIFYFSTDNLVRPFMDTLASHQLYI
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgctcacgttcatggcctctgacagcgaggaggaagtgtgtgacgagagggcgtccctg
atgtcggccgagagccccccgccacgctgctgccaggaggacaggcagggcttggaggac
ggagagggtgccgaccagtggagaggccaggatagcgaggacgactttgacgaggaccct
gaccactacgtctgcgggggggtccccgggcagccgtcaggcctggaggaggagctgacc
ctgaaatacggggcgaagcacgtgatcatgctgttcgtgccggtgacgctgtgcatgatc
gtggtggtggccaccatcaagtccgtgcgcttctacacggagaagaacggacagctgccc
tatggagcaggcagggagcagagtctgcagcccgccgtctccctcagcatctacacacca
ttcaccgaggacacgccctccgtgggccagcgcctcctcaactccgtgctcaacaccctc
atcatgatcagtgtcattgtggccatgaccatcttcttggtcgtgctctacaaataccgc
tgctacaagtttatacacggctggttgatcatgtcctcgctgatgctgcttttcctcttc
acctacatctacctcggggaggtgctcaagacctacaacgtggccatggactaccccacg
ctgttcctgacggtctggaacttcggggcggtgggcatggtgtgtatccactggaagggc
cccctggtcctgcagcaagcctacctcatcatgatcagcgccctcatggccctggtgttc
atcaagtaccttccggagtggtccgcgtgggtcatcctgggtgccatctctgtgtacgat
ctcgtggctgtgctctgccccaaagggccactgagaatgctggtggaaacggcccaggag
agaaacgagcccatattccctgccctgatatactcctccgccatggtgtggacggtgggc
atggccaagctggacccctcctcccagggagcccttcagctgccctacgacccagagatg
gaggaagactcctatgacagttttggggagccctcgtaccccgaagtctttgagcccccg
ctgcctggttaccccggggacgacctggaggaagaggaggaaaggggcgtgaagctcggc
ctgggggacttcatcttctacagcgtgctggtgggcaaggcggcggccacgggcagcggc
gactggaacacgacgctggcgtgctttgtggccatcctcattggtctgtgtctgaccctc
ctgctgctggccgtgttcaagaaggcgctgcctgccctccccatctccatcaccttcggc
ctcatcttttacttctccacggacaacctggtgcgccctttcatggacaccttggcctcg
catcagctctacatctga
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