Lynx rufus (bobcat): 124512037
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Entry
124512037 CDS
T08475
Name
(RefSeq) lysosomal cobalamin transporter ABCD4 isoform X1
KO
K05678
ATP-binding cassette, subfamily D (ALD), member 4 [EC:
7.6.2.8
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf02010
ABC transporters
lruf04146
Peroxisome
lruf04977
Vitamin digestion and absorption
lruf04980
Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
124512037
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
124512037
09150 Organismal Systems
09154 Digestive system
04977 Vitamin digestion and absorption
124512037
04980 Cobalamin transport and metabolism
124512037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
lruf04131
]
124512037
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lruf02000
]
124512037
Enzymes [BR:
lruf01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.8 ABC-type vitamin B12 transporter
124512037
Membrane trafficking [BR:
lruf04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
124512037
Transporters [BR:
lruf02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
ABCD4 subgroup
124512037
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_16
AAA_30
SbmA_BacA
AAA_22
DEAD
AAA_29
IRK
nSTAND3
NACHT
AAA_7
AAA_23
T2SSE
nSTAND6
Motif
Other DBs
NCBI-GeneID:
124512037
NCBI-ProteinID:
XP_046935313
LinkDB
All DBs
Position
Unknown
AA seq
606 aa
AA seq
DB search
MAVPGPAAGAGARPKLDLQFLQRFLQIQKVLFPSWSSQNALMFLTLLCVALLEQLVIYQV
GLIPSQYYGVLGNKDLDGFKTLTFLAVVLIILNSMLKSFDQFTCNLLYVSWRKDLTEHLH
RFYFQGRVYYTLNVLRDDVDNPDQRISQDVERFCRQLSSMASKLIISPFTLLYYTYQCFQ
STGWLGPMSIFGYFILGTVVNKMLMGPIVAKLVQQEKLEGDFRFKHMQIRVNAEPAAFFR
AGHVEHMRTDRRLQRLLQTQRELMSKELWLYIGINTFDYLGSILSYIVIAIPIFSGVYGD
LSPTELSTVVSKNAFVCIYLISCFTRLIDLSSTLSDVAGYTHRIGELEETLLDMSPKSHG
GEILDESEWDVDRAPDWPAAEPTDTAFLLERVSICAPFSNKPLIKDLSLKISEGQSLLIT
GNTGTGKTSLLRVLGSLWTSTRGSVQMLTDFGPHGVLFLPQKPFFTDGTLREQVIYPLKE
IYPDSGSTDDERIVRFLELAGLSSLVARTEGLDQQVDWNWYDVLSPGEMQRLSFARLFYL
QPKYAVLDEATSALTEEVESELYRIGQQLGMTFISVGHRRSLEKFHSLVLKLCGEGRWEL
TRIKVE
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atggcggtcccggggccggcggccggggctggcgccaggcccaaattagatctgcaattt
ctccagcggttcctgcagatacagaaggttttgtttccctcttggtcatcacagaatgct
ttgatgttcctgacccttttgtgtgtggccctactggaacaactggtgatctaccaggtt
ggcttgatcccaagtcagtactatggggtcctgggaaacaaagacttggatgggttcaag
accctaacattcctggctgtcgtgctcatcattctcaactccatgctgaagagctttgac
cagttcacctgcaacctgctgtatgtgagctggagaaaggacctcaccgagcaccttcac
cgcttctacttccagggccgtgtgtactacaccctcaacgtgctgcgggatgacgtcgat
aacccggaccagcgcatcagccaggacgtggaacggttctgccggcagctcagcagcatg
gctagcaaactgatcatctcgcccttcaccctcctctactacacctaccagtgcttccaa
agcacaggctggcttgggcctatgagcatcttcgggtatttcattctgggaaccgtggtg
aacaaaatgttgatggggcccatcgtggcaaagctggtgcagcaggagaagctggagggg
gatttcaggttcaagcacatgcagatccgggtcaatgctgagcctgctgctttcttcaga
gctgggcacgtggagcacatgaggacagaccgcaggctgcagagactccttcagacccag
agggagctgatgtccaaggagctgtggctgtacattggcatcaacacatttgactatctg
ggcagcatcctgagttacattgtgatcgcaatccctattttcagtggtgtctatggagac
ctgagccccacagagctcagcaccgtggtcagcaagaatgcctttgtgtgcatttacctc
atcagctgcttcacccggctcatcgacctctccagcaccctctcagacgtggctggttac
acgcacaggatcggggaacttgaggagacccttctggacatgtccccgaagtcgcacggt
ggtgagatcctggatgagagcgagtgggacgtggacagggccccagactggccagccgca
gaaccaacggacacagcttttctcctcgagcgggtctccatctgtgcccccttctctaac
aaacccttaatcaaggatctgagcctgaagatctctgaaggtcagagtctgctcatcacg
ggcaacacgggcaccggcaagacctccttgctccgagttctaggcagcctctggacaagc
acacggggctcagtgcagatgctgacggactttgggccccatggggtgctgttcttgcca
caaaagccattcttcactgatgggacccttcgggagcaggtgatatatcccctaaaggag
atctaccccgactcaggctctaccgacgatgagaggatcgtgaggttcttggagttggca
ggcctgtccagtttggtggcgaggacagagggtctggaccagcaggtcgattggaactgg
tacgacgttctgtccccaggagagatgcagaggctctcctttgcccggctcttctacctg
cagccaaagtacgcagtgcttgatgaagccaccagcgccctgactgaggaggtggagagt
gagctctaccgcattggccagcagctgggcatgacgttcatcagtgtgggacatcggcgc
agccttgagaagtttcactccttggttctgaaactctgcggagaaggaagatgggaactg
accagaatcaaagtggaatga
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integrated database retrieval system
