KEGG   Lynx rufus (bobcat): 124512196
Entry
124512196         CDS       T08475                                 
Name
(RefSeq) retinoblastoma-associated protein isoform X1
  KO
K06618  retinoblastoma-associated protein
Organism
lruf  Lynx rufus (bobcat)
Pathway
lruf01522  Endocrine resistance
lruf04110  Cell cycle
lruf04218  Cellular senescence
lruf04934  Cushing syndrome
lruf05160  Hepatitis C
lruf05161  Hepatitis B
lruf05163  Human cytomegalovirus infection
lruf05165  Human papillomavirus infection
lruf05166  Human T-cell leukemia virus 1 infection
lruf05167  Kaposi sarcoma-associated herpesvirus infection
lruf05169  Epstein-Barr virus infection
lruf05200  Pathways in cancer
lruf05203  Viral carcinogenesis
lruf05207  Chemical carcinogenesis - receptor activation
lruf05212  Pancreatic cancer
lruf05214  Glioma
lruf05215  Prostate cancer
lruf05218  Melanoma
lruf05219  Bladder cancer
lruf05220  Chronic myeloid leukemia
lruf05222  Small cell lung cancer
lruf05223  Non-small cell lung cancer
lruf05224  Breast cancer
lruf05225  Hepatocellular carcinoma
lruf05226  Gastric cancer
Brite
KEGG Orthology (KO) [BR:lruf00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    124512196
   04218 Cellular senescence
    124512196
 09160 Human Diseases
  09161 Cancer: overview
   05200 Pathways in cancer
    124512196
   05207 Chemical carcinogenesis - receptor activation
    124512196
   05203 Viral carcinogenesis
    124512196
  09162 Cancer: specific types
   05212 Pancreatic cancer
    124512196
   05225 Hepatocellular carcinoma
    124512196
   05226 Gastric cancer
    124512196
   05214 Glioma
    124512196
   05220 Chronic myeloid leukemia
    124512196
   05218 Melanoma
    124512196
   05219 Bladder cancer
    124512196
   05215 Prostate cancer
    124512196
   05224 Breast cancer
    124512196
   05222 Small cell lung cancer
    124512196
   05223 Non-small cell lung cancer
    124512196
  09172 Infectious disease: viral
   05166 Human T-cell leukemia virus 1 infection
    124512196
   05161 Hepatitis B
    124512196
   05160 Hepatitis C
    124512196
   05163 Human cytomegalovirus infection
    124512196
   05167 Kaposi sarcoma-associated herpesvirus infection
    124512196
   05169 Epstein-Barr virus infection
    124512196
   05165 Human papillomavirus infection
    124512196
  09167 Endocrine and metabolic disease
   04934 Cushing syndrome
    124512196
  09176 Drug resistance: antineoplastic
   01522 Endocrine resistance
    124512196
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:lruf01009]
    124512196
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:lruf03000]
    124512196
Protein phosphatases and associated proteins [BR:lruf01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     124512196
Transcription factors [BR:lruf03000]
 Eukaryotic type
  Other transcription factors
   Pocket domain Rb
    124512196
SSDB
Motif
Pfam: Rb_C RB_A RB_B DUF3452 TFIIB
Other DBs
NCBI-GeneID: 124512196
NCBI-ProteinID: XP_046935619
LinkDB
Position
Unknown
AA seq 928 aa
MPPKTPRRAAAAAAAAAAAAEPPAPPPPPPEEDPEQDSGPEDLPLPRLVFEETEEPDFIA
LCQKLKIPDHVRERAWFTWEKVSSVDGVLEGYSQRKKELWGICIFIAAVDLDEMPFTFTE
LQKNIETSVYKFFDLLKEVDTSTKVDNAMSRLLKKYKVLCALYSKLERTCEHIYLTQPGS
LLSTEINSLLVLKASWITFLLAKGEVLQMEDDLVISFQLMLCVLDYFIKLSPPALLKEPY
KTAVIPLNGSPRTPRRGQNRSARIAKQLENDTRIIEVLCKEHECNIDEVKNVYFKNFIPF
MNSLGIVASNGLPEVESLSKQYEEIYLKNKDLDARLFLDHDKTLQADPIDSFEMQRTPRK
SNSDEEVNTMLPQTPVRTVMNTIQQLMMILNSASDQPSENLISYFNNCTVNPKESILKRV
KDIGCIFKEKFAKAVGQGCMEIGSQRYKLGVRLYYRVMESMLKSEEERLSIQNFSKLLND
NIFHMSLLACALEVVMATYSRSTSQNLDTGTDLSFPWILNVLNLKAFDFYKVIESFIKAE
ANLTREMIKHLERCEHRIMESLAWLSDSPLFDLIKQAKDREGPADHLESACTLSLPLQSN
HTAADMYLSPIRSPKKKGTTRVNSTANTEAQATSAFQTQKPLKSTSLSLFYKKVYRLAYL
RLNTLCARLLSDHPELEHIIWTLFQHTLQNEYELMRDRHLDQIMMCSMYGICKVKNIDLK
FKIIVTAYKDLPHAVQETFKRVLIREEEYDSIIVFYNSVFMQRLKTNILQYASTRPPTLS
PIPHIPRSPYKFSSSPLRIPGGNIYISPLKNPYKISEGVPTPTKMTPRSRILVSIGESFG
TSEKFQKINQMVCNSDRVLKRSAEGGNPPKPLKKLRFDIEASDEADGSKHLPGESKFQQK
LAEMTSTRTRMQKQKMNDSMDTSNREEK
NT seq 2787 nt   +upstreamnt  +downstreamnt
atgccgcccaaaaccccccggagagcagcagccgcagccgccgctgccgccgccgccgcc
gaacccccggcgccgccgccgccccctcctgaagaggaccccgagcaggacagcggcccc
gaggacttgcctctgcccaggcttgtatttgaagaaactgaagaacctgattttattgca
ttatgtcagaaattaaagataccagatcatgtcagagaaagagcttggtttacttgggaa
aaagtttcatctgtggatggagtgttggaaggttatagtcaaaggaaaaaggaactatgg
ggaatctgtatctttattgcagcagttgacctagatgagatgccattcacctttactgag
ctacagaaaaacatagaaaccagtgtctacaaattctttgatttactaaaagaagttgat
acgagtaccaaagttgataatgctatgtcaagactgttgaagaagtataaggtattgtgt
gcactctacagcaaattggaaaggacatgtgaacatatatatttgacacaacctggcagt
ttgctatctactgaaataaactctctgttggtgctaaaagcttcttggatcacattttta
ctagctaaaggggaagtgttacaaatggaagatgatctcgtcatctcatttcagttaatg
ctctgtgtccttgattattttattaaactctcacctcctgcgttgcttaaagaaccatat
aaaacagctgtaatacctttaaatggttcacctcgaacaccaaggcgaggtcagaacagg
agtgcacggatagcaaaacaactagaaaatgatacaagaattattgaagttctctgtaaa
gaacatgaatgtaatatagatgaggtgaaaaatgtttatttcaaaaatttcatacctttt
atgaattctcttggaattgtagcttctaatggacttccagaggtggaaagtctctctaaa
caatatgaagaaatttaccttaaaaacaaagatcttgatgcaagattatttctggatcat
gataaaactcttcaggctgatcctatagacagttttgaaatgcagagaacaccacgaaaa
agtaactctgatgaagaggtgaatacgatgcttccgcagactccagttaggaccgttatg
aatactattcaacagttaatgatgatcttaaattcagcaagtgatcaaccatcagaaaat
ctgatttcctattttaataactgcacagtgaatccaaaggaaagtatcctgaaaagagtg
aaggatattggatgcatctttaaagagaaatttgctaaagctgtgggacagggatgtatg
gaaattggatcacagagatacaaacttggagtccgattatattaccgagtaatggaatct
atgcttaaatcagaagaagaacgattatccattcaaaattttagtaaactcctgaatgac
aacatctttcatatgtctttgttggcatgcgctcttgaggttgtaatggctacatatagc
agaagtacatctcagaatcttgatactggaacagatttgtccttcccatggattctgaat
gtacttaatttaaaagcctttgatttttacaaagtgattgaaagttttatcaaagcagaa
gccaacttgaccagagaaatgataaaacatttagagcgatgtgaacatcgaatcatggaa
tcccttgcatggctctctgattcacctttatttgatcttattaaacaagcaaaggaccga
gaaggaccagctgatcaccttgaatctgcttgtactctcagccttcctctccagagtaat
cacactgcagcagatatgtatctttctccaatcagatccccaaagaaaaaaggaactaca
cgtgtaaattctactgcaaacacagaggcacaagcaacctcagccttccagactcagaag
ccattgaaatctacctccctttcacttttttacaaaaaagtgtaccgactggcctatctt
cgactaaataccctgtgtgcacgccttctgtctgaccaccctgaactggaacacatcatc
tggaccctttttcagcacacactgcaaaatgagtatgaactcatgagagacaggcatttg
gatcagattatgatgtgttccatgtatggcatttgcaaagtgaagaatatagaccttaaa
ttcaaaatcattgtaacagcatacaaggatcttcctcatgctgttcaggagacattcaaa
cgagttttgatcagagaagaggagtatgattccattatagtattctataactcagtcttc
atgcagagacttaaaacaaatattttgcagtatgcttctaccaggcccccgactttgtca
ccaatacctcacattcctcgaagtccttacaagttttctagttcacctttacgaattcct
gggggaaacatctatatatcacccctgaagaatccatataaaatttcagaaggtgtgcca
acaccaacaaaaatgactccaagatcgagaatcttagtatcaattggtgaatcatttggg
acttctgagaagttccagaaaataaatcagatggtgtgtaacagtgaccgtgtgctcaaa
agaagtgctgaaggaggcaaccctcctaaaccgctgaaaaaactacgctttgatattgaa
gcatcagatgaagcagacggaagtaaacatctcccaggggaatccaaatttcaacagaaa
ctggcagaaatgacatctacccgaacacgaatgcagaagcaaaaaatgaacgatagcatg
gatacctcaaacagggaagaaaaatga

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