Lynx rufus (bobcat): 124512893
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Entry
124512893 CDS
T08475
Name
(RefSeq) sodium channel protein type 4 subunit alpha
KO
K04837
voltage-gated sodium channel type IV alpha
Organism
lruf
Lynx rufus (bobcat)
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124512893
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
124512893
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
IQ_SCN5A_C
PKD_channel
GPHH
IQ
Motif
Other DBs
NCBI-GeneID:
124512893
NCBI-ProteinID:
XP_046936488
LinkDB
All DBs
Position
Unknown
AA seq
1828 aa
AA seq
DB search
MASSSLPTLVPLGPESLRPFTRESLAAIERRAVEEEARQQRNKQMEIEEPERKPRSDLEA
GKSLPLIYGDPPPEVIGIPLEDLDPYYSDKKTFIVLNKGKAIFRFSATPALYMLSPFSII
RRGAIKVLIHSLFSMFIMITILTNCVFMTMSDPPSWSKHVEYTFTGIYTFESLIKMLARG
FCIDDFTFLRDPWNWLDFSVIMMAYLTEFVDLGNISALRTFRVLRALKTITVIPGLKTIV
GALIQSVKKLSDVMILTVFCLSVFALVGLQLFMGNLRHKCVRWPPPFNDTNTTWYGNDTW
YGNETWYGNETWTGHESWASNYTFDWDAYINDKGNFYFLEGANDALLCGNSSDAGHCPEG
YECIKAGRNPNYGYTSYDTFSWAFLALFRLMTQDYWENLFQLTLRAAGKTYMIFFVVIIF
LGSFYLINLILAVVAMAYAEQNEATLAEDQEKEEEFQQMLEKFKKQQEELEKAKAAQALE
GGEADGDPAHGKDCNGSLDTSLGEKGPPRQSCSADSGISDAMEELEEAHQKCPPWWYKCA
HKVLIWNCCTPWVKFKNIIHLIVMDPFVDLGITICIVLNTLFMAMEHYPMTEEFDNVLTV
GNLVFTGIFTAEMVLKLIALDPYEYFQQGWNIFDSIIVTLSLVELGLANVQGLSVLRSFR
LLRVFKLAKSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKECVCK
IATDCSLPRWHMYDFFHSFLIVFRILCGEWIETMWDCMEVAGQAMCLTVFLMVMVIGNLV
VLNLFLALLLSSFSADSLAASDEDGEMNNLQIAIGRIKWGIGFAKAFLLGLLRGKILSPK
EIMLSLGGPEEAGAAEEAGESASEDEKKEPPPEEDDKDLKKDNHILSHVGLVDGSPPSIE
LDHLNFINNPYLTIHVPIASEESDLEMPTEEDTDTFSEPEDGKQPPQPLDGNSSVCSTAD
YKPPEEDPEEQAEENPEGEQPEECFTEACVQRCPFLYVDISQGRGKMWWTLRRACFKIVE
HNWFETFIVFMILLSSGALAFEDIYIEQRRTIRTILEYADKVFTYIFILEMLLKWVAYGF
KVYFTNAWCWLDFLIVDVSIISLVANWLGYSELGPIKSLRTLRALRPLRALSRFEGMRVV
VNALLGAIPSIMNVLLVCLIFWLIFSIMGVNLFAGKFYYCINTTTSERFDVSEVNNKSEC
ESLMHTGQVRWLNVKVNYDNVGLGYLSLLQVATFKGWMDIMYAAVDSREKEEQPQYEVNI
YMYLYFVIFIIFGSFFTLNLFIGVIIDNFNQQKKKFGGKDIFMTEEQKKYYNAMKKLGSK
KPQKPIPRPQNKIQGMVYDCVTKQVFDITIMILICLNMVTMMVETDDQSQLKVDILYNIN
MVFIIIFTGECVLKMLALRQYYFTVGWNIFDFVVVILSIVGLALSDLIQKYFVSPTLFRV
IRLARIGRVLRLIRGAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYSIFGMSNFAYVKK
ESGIDDMFNFETFGNSIICLFEITTSAGWDGLLNPILNSGPPDCDPTLENPGTSVRGDCG
NPSIGICFFCSYIIISFLIVVNMYIAIILENFNVATEESSEPLGEDDFEMFYETWEKFDP
DATQFIAYSRLSDFVDTLQEPLRIAKPNKIKLITLDLPMVPGDKIHCLDILFALTKEVLG
DSGEMDALKETMEEKFMAANPSKVSYEPITTTLKRKHEEVCAIKIQRAYRRHLLQRTVKQ
ASYMYRHSQDGRGDGGPEKEGLIANTMSKMYGHENGNSSVQSTGEEKGSTGDSGPSIGLT
PISPSDAALPPSPSPGQTVRPGVKESLV
NT seq
5487 nt
NT seq
+upstream
nt +downstream
nt
atggccagctcatctctgcccactctggtgcctctgggccctgagagcctgcgccccttc
acccgggagtccctggcagccatagaacgccgggcagtggaggaggaggcccggcagcag
cggaacaagcagatggagattgaggagcctgaaaggaagccacgcagcgacctggaggct
ggcaagagcctgccccttatttatggggaccccccaccggaggtcatcggcatccccctg
gaggacctggacccctactacagcgacaagaagaccttcatcgtgcttaacaagggcaag
gccatctttcgcttctccgctacaccagctctctacatgctgagccctttcagcatcatc
agacgtggtgccatcaaggtgctcattcactcgctgttcagcatgttcatcatgatcacc
atcctgaccaactgtgtattcatgaccatgagcgacccgccttcctggtccaagcatgtg
gagtacacattcacagggatctatacctttgagtccctcatcaagatgctggcccgaggc
ttctgcattgacgacttcacattcctccgggacccctggaactggctggacttcagtgtc
atcatgatggcgtacctgacagagtttgtggacttgggcaatatctcagccctgagaacc
ttccgggtgctgcgggccctgaaaaccatcacagtcatcccagggctgaagacgatcgtg
ggggccctgatccagtcggtgaaaaagctgtcggatgtgatgatcctcaccgtcttctgc
ctgagtgtctttgccctggtcgggctgcagctcttcatgggaaacctgcggcacaagtgc
gtgcgctggcccccacccttcaacgacaccaacaccacgtggtacggcaacgatacgtgg
tatggtaatgagacgtggtatggtaatgagacgtggaccggccacgagagctgggccagc
aactatacctttgactgggacgcctacatcaatgataaagggaacttctatttcctggag
ggtgccaatgacgccctgctttgtgggaacagcagcgatgctgggcactgccccgagggt
tacgagtgtatcaaggctgggcggaaccccaactatggctacaccagctatgacaccttc
agctgggccttcctggctctcttccgcctcatgacacaggattattgggagaacctcttc
cagctgaccctccgagcagctgggaagacctacatgatcttcttcgtggtcatcattttc
ctgggctccttctacctcatcaatctgatcctggcagtggtggccatggcatacgcagag
cagaacgaggccaccctggctgaggatcaggagaaagaagaagagtttcagcagatgctg
gagaaattcaaaaagcagcaggaggagctggagaaggccaaggccgcccaggctctggaa
ggcggggaggcagatggggacccagcccacggtaaagactgcaatggcagcctagacaca
tcactgggggagaaggggcctccaaggcagagctgcagcgcagacagcggtatctctgat
gctatggaagagctggaagaggcccaccagaagtgcccaccatggtggtacaagtgtgcc
cacaaagtgctcatatggaactgctgcaccccatgggtgaagttcaagaacatcatccac
ctgattgtcatggacccctttgtggacctgggcatcaccatctgcatcgtgctcaacacc
ctcttcatggccatggagcattaccccatgacagaggagtttgacaacgtgctaaccgtg
ggcaacctggttttcacaggcatcttcacagcagagatggtactgaagctcatcgccctg
gacccctacgagtacttccagcagggctggaacatcttcgacagtatcatcgtcaccctc
agcctggtggagctgggcctggccaacgtgcagggactgtccgtgctccgctcctttcgg
ctgctgcgtgtctttaagctggccaagtcgtggccaacgctgaacatgctcatcaagatc
atcggcaactcagtgggcgcgctgggcaacctgacgctggtgctggccatcatcgtgttc
atctttgccgtcgtgggcatgcagctgttcggcaagagctacaaggagtgtgtgtgcaag
atcgccacggactgtagcctgccccgctggcacatgtacgacttcttccactccttcctc
atcgtcttccgcatcctgtgcggggagtggatcgagaccatgtgggactgcatggaggtg
gccggccaggccatgtgcctcaccgtcttcctcatggtcatggtcatcggcaacctagtg
gtcctgaacctcttcttggcgctgctgctcagctccttcagcgccgacagcctggcagcc
tcagatgaggacggcgagatgaacaacctgcagatcgccattgggcgcatcaagtggggc
atcggctttgccaaagcctttctcctggggctgctgcgcggcaagatcctgagccccaag
gaaatcatgctcagcctcggggggcccgaggaggccggggcggcagaggaggctggggag
agtgcctcagaggatgagaagaaggagccgccgcccgaggaggatgacaaggacctgaag
aaggacaatcacatcctgagccacgtgggcctggtggacggctctccccccagcattgag
ctggatcacctcaacttcatcaacaacccctacctgaccattcacgtgcccatcgcttcc
gaggagtccgacctggagatgcccacagaggaggacactgacactttctcagagcctgag
gatggcaagcagccaccgcagcccctcgatgggaactcctccgtctgcagcaccgccgac
tataagccccccgaggaagaccccgaggagcaggctgaagagaaccctgaaggggagcag
cctgaggagtgcttcacagaggcctgtgtgcaacgctgccctttcctctacgtggacatc
tcccagggccgcgggaagatgtggtggaccctccgcagggcctgcttcaagatcgtcgag
cataactggttcgagaccttcattgtcttcatgatcctgctcagcagcggggccttggcc
ttcgaggacatttacatcgagcagcggcggaccatccgcaccatcttggagtatgccgac
aaggttttcacctacatcttcatcctggaaatgctgctcaagtgggtggcctacggcttc
aaggtgtacttcaccaatgcctggtgctggcttgacttcctcattgtggatgtctccatc
atcagcctggtggccaactggctgggctactcggagctgggacccatcaaatccctgagg
acgctgcgggccctgcgtcccctgagggcgctgtcccgatttgagggcatgagggtggtg
gtgaatgccctcttgggagccatcccctccatcatgaacgtgctgcttgtctgcctcatc
ttctggctcatcttcagcatcatgggcgtcaacctgtttgccggcaagttctactactgc
atcaataccaccacctctgagaggtttgacgtctctgaggtcaacaacaagtctgagtgt
gagagcctgatgcacacgggccaggtccgctggctcaacgtcaaggtcaactatgacaat
gtgggtctaggctacctctccctcctgcaggtggccaccttcaagggctggatggacatc
atgtatgcagctgtggactcccgggagaaggaggaacagccacagtatgaggtgaacatc
tacatgtacctctattttgtcatcttcatcatcttcgggtccttcttcaccctcaacctc
tttattggcgtcatcatcgacaacttcaaccagcagaagaagaagtttggagggaaagac
atcttcatgacggaggaacagaagaaatactataatgccatgaagaagcttggctccaag
aagcctcagaagccaattccccggccccagaacaagatccagggcatggtgtatgactgc
gtgactaagcaggtgttcgacatcacgatcatgatcctcatctgcctcaacatggtcacc
atgatggtggagacagacgaccagagccagctcaaagtggacatcctgtacaacatcaac
atggtcttcatcatcatcttcaccggggagtgtgtgctcaagatgctcgccctgcgccag
tactatttcaccgtcggctggaacatcttcgactttgtggttgtcatcctgtccattgtg
ggactcgcgctctccgatctgatccagaaatacttcgtgtcacccacactgttccgagtg
atccgcctggcgcggatcgggcgtgtcctgcggctgatccgcggggccaagggcatccgg
actctgctctttgccctcatgatgtccctgcctgccctcttcaacatcggcctcctcctc
ttcctggtcatgtttatctactccatcttcggcatgtccaactttgcctatgtcaagaag
gagtcgggcatcgatgacatgttcaactttgagacctttggcaacagcatcatctgcctc
ttcgagatcaccacgtcggctggctgggatgggctcctcaaccccatcctcaacagcggg
ccccctgactgtgaccctacactcgaaaacccgggcaccagtgtcaggggcgactgtggc
aacccctccatcggcatctgcttcttctgcagctacatcatcatctccttcctcatcgtg
gtcaacatgtacattgccatcatcctggagaacttcaatgtggccactgaggagagcagc
gagccccttggcgaggacgactttgagatgttctacgaaacgtgggagaagtttgaccct
gacgccacgcagttcattgcctacagccgcctctctgactttgtggacaccctgcaggag
ccactgagaatcgccaagcccaacaagatcaagctcatcacgctggacctgcccatggtg
ccaggggacaagatccactgcctggacatcctctttgccctcaccaaggaagtcctaggt
gactctggggaaatggacgccctcaaggagaccatggaggagaagttcatggcagccaac
ccctccaaagtctcctatgagcccatcaccaccaccctcaagaggaagcatgaggaggtg
tgtgccatcaagatccagagggcctaccgccggcacctgctccagcgcaccgtgaagcag
gcatcctacatgtaccgccacagccaggatggcaggggggatgggggtcctgagaaggag
ggcctgatcgccaacaccatgagcaagatgtatggccacgagaatgggaacagcagtgtg
cagagcacaggtgaggaaaagggctcaacaggggactctggaccttccataggactcaca
cccatcagcccctcagacgctgccctccctccttccccatccccagggcagacagtgcgc
ccgggggtcaaggaatctctcgtctag
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integrated database retrieval system
