Lynx rufus (bobcat): 124512955
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Entry
124512955 CDS
T08475
Name
(RefSeq) telomerase-binding protein EST1A isoform X1
KO
K11124
protein SMG6 [EC:3.1.-.-]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
124512955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lruf03019
]
124512955
03032 DNA replication proteins [BR:
lruf03032
]
124512955
Messenger RNA biogenesis [BR:
lruf03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
124512955
mRNA cycle factors
Common to processing body (P body) and stress granule
124512955
DNA replication proteins [BR:
lruf03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (animals)
124512955
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
EST1_DNA_bind
PIN_4
EST1
PIN_9
Motif
Other DBs
NCBI-GeneID:
124512955
NCBI-ProteinID:
XP_046936568
LinkDB
All DBs
Position
Unknown
AA seq
1376 aa
AA seq
DB search
MAEGLERVRISASELRGILAALAPQAGSRENMKEPRQRKDNRRPDLEIYKPGLSRLRNKP
KIKEPSGSDEFKDEIVNDRDCSAVGNGTQLIKDVCKELDNQHQNGPVDPENTQAQESFPR
TSGQEDRSLRIIKRTKKPDMQIYQPGRRLQTVAKESTSRVGEEEILNQVEQLRVEEDEYR
GNVKEEVVNKPDKDEAEKSLNGDRVRVAKGEKGRRIEKGEGIKKVNDDPAQGKPGSAKRY
SRSDKRRNRYRTCSTSSAGSNNSAEGAGLTDNACRRRRQDRTKERPRLKKQVSMSSTDSL
DEDRIDESDGPRRSSERKKHLERSWSGRGEGEQKSNGKENRGTLHVTFDAETMNKDSPMV
RSSREDVDRIKPDKGLSSGGKGSEKQESKNLKQELRGRGRGILILPAHTTLSVNSAGSPE
SAPLGPRLLFGSGSKGSRSWGRGGTTRRLWDPNNPDQKPALKSQTPQLHFLDTDDEVSPT
SWGDSRQAQASYYKFQNSDNPYYYPRTPGPASQYPYTGYSPLQYPVGPTNGVYPGPYYPG
YPTPAGQYVCGPLPASTMSPEEMEQHMRNMQQQELHRLLRVADNQELQLSNLLSRDRISP
EGLEKMAQLRAELLQLYERCILLDIEFSDNQNVDQILWKNAFYQVIEKFRQLLKDPNVEN
PEQIRNRLLELLDEVKYALISAQRCMICQGDIARYREQANDTANYGKARSWYLKAQHIAP
KNGRPYNQLALLAVYTRRKLDAVYYYMRSLAASNPILTAKESLMSLFEETKRKAEQMEKK
QHEELELSPDQWRKGKKSTFRHVGDDTTRLEIWIHPSHPRSSQGTESGKDSEQENGLGSL
SPSDLNKRFILSFLHAHGKLFTRIGMETFPAVAEKVLKEFQVLLQHSPSPIGSTRMLQLM
TINMFAVHNSQLKDCFSEECRSVIQEQAAALGLAMFSLLVRRCTCLLKESAKAQLSSPED
EDDQDDIKVSSFVPDLKELLPSVKVWSDWMLGYPDTWNPPPTSLDLPSQVAMDVWSMLAD
FCNILTAVNQSEVPLYKDPDDDLTLLILEEDRLLSGFVPLLAAPQDPCYVEKTSDKVIAA
DCKRVTVLKYFLEALCGQEEPLLAFKGGKYVSVAPVPDTMGKEMGSQEGKQLEDEEEDVV
IEDFEEDSEAEGSGGEDDIRELRAKKLALARKIAEQQRRQEKIQAVLEDQSQMRQMELEI
RPLFLVPDTNGFIDHLASLARLLESRKYILVVPLIVINELDGLAKGQETDHRAGGYARVV
QEKARKSIEFLERRFESRDSCLRALTSRGNELESIAFRSEDITGQLGNNDDLILSCCLHY
CKDKAKDFMPTNKEEPIRLLREVVLLTDDRNLRVKALTRNVPVRDIPAFLTWAQVG
NT seq
4131 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggggttggagcgtgtccggatctcggcgtcggagctgcgagggatcctggcc
gctctggctccgcaggccgggagcagagaaaacatgaaggagcccaggcagcgcaaagat
aacaggcgcccagatctagaaatctataagcctggtctttcccggctaaggaacaaacct
aaaatcaaggaaccttctgggagtgatgaatttaaggatgaaattgttaatgacagagat
tgttctgctgttggaaatggtacacagctcattaaagatgtctgcaaggaactggataat
caacaccaaaatggtcctgtagatccagaaaatactcaggcacaggagtcctttcctagg
acttctggacaagaggatcgaagtctaagaattatcaagagaacaaagaaacctgacatg
cagatctaccagcctggaaggcgtttgcagactgttgccaaagaatcaactagcagggtg
ggtgaggaagaaatcctcaaccaggtagaacaactgagagtagaagaagatgaatatagg
ggaaatgtgaaagaggaggttgtgaataaaccagataaagatgaggcagaaaagagcctc
aatggtgacagagtaagggttgcaaagggagaaaaaggaaggaggattgaaaagggggag
gggataaagaaagtgaatgatgacccggcacaggggaagccaggttctgcaaagcgctac
tcccgctcagacaaacggaggaaccgataccgcacttgcagtaccagctcagctggcagc
aacaacagtgctgagggggctggcctgactgataacgcatgtcgtcgccgccgacaggat
cggaccaaggagagaccacgactgaagaagcaagtatctatgtcctcaactgattcttta
gacgaggacagaattgatgagtctgatggacccaggaggagctcggaaaggaagaaacat
ttagaaagaagctggtctggccggggggagggagagcagaaaagcaacggcaaagaaaac
cgaggcacacttcatgtcacttttgatgcagaaaccatgaacaaagattcccccatggtg
agatcatccagggaggatgtggataggataaagcctgacaaaggcttgagcagtgggggc
aaaggctctgagaagcaagagtccaaaaacctgaagcaagaacttcggggtcggggacga
ggcattctgattctgcctgcccataccaccctatctgtcaattcagctggttctccagaa
tctgcacctttgggacctcggcttttatttggatctggtagtaagggatctcggagttgg
ggccgaggaggcaccactcgacgattatgggacccaaacaatcctgatcagaaacctgct
ctaaagagccagacgccccagctacatttcttggacactgatgatgaagtcagccctact
tcttggggtgactcccgccaggcccaagcatcttactataagtttcaaaactctgacaac
ccctattattacccccggacaccaggtcctgcctcccagtatccttatacaggttatagc
cctctgcagtacccagtgggccctacgaatggtgtgtaccctgggccttactacccgggc
tacccgactccagcaggacagtatgtttgtggccctcttcctgccagcaccatgagtcct
gaggagatggaacagcatatgaggaacatgcagcagcaggagctgcataggcttctccgg
gtggctgacaaccaggaactgcagctcagcaacctgctctccagggaccgcatcagtccg
gagggcctggagaagatggctcagctcagagctgaactgctgcagctatatgagcgctgt
atcctattagatattgagttctctgataatcagaatgtggatcagatcctgtggaagaat
gctttctatcaggtgattgagaagttcaggcagcttctcaaggatccgaatgttgagaac
ccagagcagattcggaacagacttttggagctcttggatgaggtaaaatatgctttgatc
agtgcccagcgatgtatgatttgccaaggagatatcgctaggtatcgggaacaagccaat
gacacagcaaactacgggaaagcacgcagttggtacctaaaggcccagcatattgctccc
aagaatgggcgcccctataaccagttggctctgctggcagtatacacgaggaggaagctt
gatgctgtctattactatatgcgcagtttagctgccagcaaccctatcctgactgccaag
gagagtctcatgagcttgtttgaagagaccaaacgaaaggcagaacagatggaaaaaaag
caacatgaggagttggaactgagccctgaccaatggcggaaaggaaagaagtctactttc
cggcatgttggagatgacaccactcgcttagagatctggatccacccatcacatcctcgg
tcctcccagggcactgaatctgggaaggattctgagcaggagaatgggctgggcagcctg
agcccaagtgatctgaacaaaaggttcatcctcagttttctccatgcccatgggaagctg
tttacccggattgggatggagacattccctgcggtggctgagaaggtcctcaaggagttc
caggtgttgctgcagcatagcccctctccaattggaagtacccgcatgctgcagcttatg
accatcaacatgttcgctgtgcacaactctcagttgaaagactgcttctcggaggagtgt
cgctctgtgatccaggagcaagcggcagcgctgggcctggccatgttttctctcctggtg
cggcgctgcacctgcttacttaaggagtctgccaaagctcagctgtcctctcctgaggac
gaggatgaccaagatgacatcaaggtgtcttccttcgtcccggacctgaaggaactgctc
cccagtgtgaaagtctggtcagactggatgctcggctacccagacacctggaaccctccg
cccacgtccctggacctgccctcacaggttgctatggatgtgtggtcgatgctggctgat
ttctgtaacatattgactgcggtgaatcagtctgaggtgccactgtacaaggacccggac
gatgacctcacccttcttatcctggaagaggatcggcttctctcgggctttgtccccttg
ctggctgcccctcaggacccctgctacgtggagaaaacctcggataaggttattgcagcc
gactgcaaaagggtcacagtgctgaagtattttctggaagccctttgtggacaagaagag
cctctgctggcattcaagggtggaaaatatgtgtcagtggcacccgtcccagacaccatg
ggaaaggaaatgggaagccaagagggaaaacaactggaagatgaggaggaggacgtggtg
attgaagactttgaggaagattcagaggccgaaggcagcgggggtgaggatgacatcagg
gaacttcgggccaagaagctggctttggccaggaagatagccgagcagcagcgtcgccaa
gaaaagatccaggctgtcctggaggaccagagtcagatgaggcagatggagctcgagatc
agacccttgttccttgtaccagacaccaacggcttcattgaccacctggccagtctggca
cggctgctggagagcaggaagtacatcctggtggtgcccctcatcgtgatcaatgagctg
gacggcctggccaaggggcaggagacagaccaccgggctgggggctatgcccgtgtggtg
caggaaaaggcccggaagtccattgagttcctcgagcggcgatttgagagtcgggactct
tgtctgcgggccctgaccagccgtggcaatgaactggaatccatcgccttccgcagcgag
gacattactggccaactgggtaacaacgatgacctgatcctctcctgctgcctccactac
tgcaaagacaaggctaaggacttcatgcccaccaacaaagaggagccaatccggctactg
cgggaggtggtgctgttgacggatgaccgcaacctgcgtgtgaaggcactgacgaggaat
gtgcctgtgcgggacatcccggccttcctcacgtgggcccaggtgggctga
DBGET
integrated database retrieval system
