Lynx rufus (bobcat): 124514448
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Entry
124514448 CDS
T08475
Name
(RefSeq) histone-lysine N-methyltransferase SETDB1 isoform X1
KO
K11421
[histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase [EC:
2.1.1.366
]
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf00310
Lysine degradation
lruf01100
Metabolic pathways
lruf04550
Signaling pathways regulating pluripotency of stem cells
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
124514448
09140 Cellular Processes
09144 Cellular community - eukaryotes
04550 Signaling pathways regulating pluripotency of stem cells
124514448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lruf03036
]
124514448
Enzymes [BR:
lruf01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.366 [histone H3]-N6,N6-dimethyl-lysine9 N-methyltransferase
124514448
Chromosome and associated proteins [BR:
lruf03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
124514448
Heterochromatin formation proteins
Other heterochromatin formation proteins
124514448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF5604
Tudor_4
SET
MBD
Tudor_5
Pre-SET
Chromo_MORC2_6th
DUF4537
53-BP1_Tudor
Chromo
BRCA-2_OB3
Motif
Other DBs
NCBI-GeneID:
124514448
NCBI-ProteinID:
XP_046938400
LinkDB
All DBs
Position
Unknown
AA seq
1303 aa
AA seq
DB search
MSSIPGCIGLGAAAAAVESDEIAELQQAVVEELGISMEELRQFIDEELEKMDCVQQRKKQ
LAELETWVIQKESEVAHVDQLFDDASRAVTNCESLVKDFYSKLGLQYRDSSSEDEASRPT
EIIEIPDEDDDVLSIDSATKVFKGDAGSRTPKDQKLREAMAALRKSAQDVQKFMDAVNKK
SSSQDLHKGTLSQMSGELSKDGDLIVSMRILGKKRTKTWHKGTLIAIQTVGPGKKYKVKF
DNKGKSLLSGNHIAYDYHPPADKLFVGSRVVAKYKDGNQVWLYAGIVAETPNVKNKLRFL
IFFDDGYASYVTQSELYPICRPLKKTWEDIEDISCRDFIEEYITAYPNRPMVLLKSGQLI
KTEWEGTWWKSRVEEVDGSLVRILFLDDKRCEWIYRGSTRLEPMFSMKTSSASALEKKQG
GPLRTRPNMGAVRSKGPVVQYTQDLTSTGTQFKPTEPPQPTAPPAPPAPPAPPAPPAPPV
SPQAGDNDSLESQLAQSRKQVAKKSTSFRPGSVGSGHSSPTSPALSENVPAGKPGSNQTY
RSPLGPTASAPAAPPAPPVPPAFHGMLERAPAEPSYRAPMEKLFYLPHVCSYTCLSRVRP
MRSAQYRGKNPLLVPLLYDFRRMTARRRVNRKMGFHVIYKTPCGLCLRTMQEIERYLFET
GCDFLFLEMFCLDPYVLVDRKFQPYKPFYYILDITYGKEDVPLSCVNEIDTTPPPQVAYS
KERIPGKGVFINTGPEFLVGCDCKDGCRDKSKCACHQLTIQATACTPGGQINPNSGYQYK
RLEECLPTGVYECNKRCKCDPNMCTNRLVQHGLQVRLQLFKTQNKGWGIRCLDDIAKGSF
VCIYAGKILTDDFADKEGLEMGDEYFANLDHIESVENFKEGYESDAPCSSDSSGVDLKDQ
EDGNSGTEDPEESNDDSSDDNFCKDEDFSTSSVWRSYATRRQTRGQKENGLSETASKDSR
PPDLGPPHIPVPPAIPGGGCNPPSSEETPKNKVASWLSCNSVSEGGFADSDSRSSFKTSE
GGEGRAGGGRGEAEKASTSGLGFKDEGDLKQAKKEDPDDRNKMSLITESSRNYGYNPSPM
KLEGLRRPPSKTSMHQSRRLMASAQSNADDVLTLSSSTESEGESGTSRKPTAGQTSATAV
DSDDIQTISSGSEADDFEDKKNMSGPTKRQVAVKSTRGFALKSTHGIAIKSTNMASVEKG
ESAPVRKNTRQFYDGEESCYIIDAKLEGNLGRYLNHSCSPNLFVQNVFVDTHDLRFPWVA
FFASKRIRAGTELTWDYNYEVGSVEGKELLCCCGAIECRGRLL
NT seq
3912 nt
NT seq
+upstream
nt +downstream
nt
atgtcttccatccctgggtgcattggtttgggtgcagccgcagctgcagtggagtctgat
gagatcgcagagctgcaacaagcggtggttgaggagctgggtatctcaatggaggaactg
agacagttcatcgatgaagaactggagaagatggactgtgtacagcagcgaaagaagcaa
ctagcggagttggagacgtgggtaatacagaaggaatctgaggtggcccatgttgatcag
ctctttgatgatgcatccagggcagtgactaactgtgagtctttggtgaaggacttttat
tccaaactgggactacaataccgggacagtagctctgaggatgaagcctcccggcctaca
gaaataatcgagattcctgatgaagatgatgatgtcctcagtattgattcagccacaaag
gttttcaaaggtgatgctgggagcagaacacccaaagaccagaagctccgtgaggctatg
gctgccttaagaaagtcagctcaagatgtccagaagttcatggatgctgtcaacaaaaag
agcagctcccaagatctacataaaggaaccttgagtcagatgtctggagaactgagcaaa
gatggtgacctaatagtcagcatgcgcatcctgggcaagaagagaactaagacatggcac
aaaggcacccttattgccatccagacggtcggaccaggaaagaagtacaaggtgaaattt
gacaacaaagggaagagtctactgtcagggaaccatattgcctatgattaccaccctcct
gctgacaagctgtttgtgggcagtcgagtggtggccaagtacaaggatgggaatcaggtc
tggctctatgctggcattgtagctgagacaccaaacgtcaaaaacaagctcaggtttctc
attttctttgatgatgggtacgcttcctatgtcacacaatctgaactgtatcccatttgc
cggccactgaaaaagacatgggaggacatagaagacatctcctgccgagacttcatagag
gagtacatcacagcctaccccaaccgccctatggtgctactcaagagtggccagcttatc
aagactgagtgggaaggcacatggtggaagtcccgggtcgaggaggtggacggcagccta
gtcaggatcctcttcctggatgacaaaagatgcgaatggatctatcgaggctccacacgg
ctagagcccatgttcagcatgaagacctcctcagcctccgcactagagaagaagcaaggg
ggaccgctcaggacacgtccaaatatgggtgctgtgaggagcaaaggccctgtggtccag
tacacccaggatctgaccagtactgggacccagttcaagccaacggagcccccacagcct
acagcccctcctgctccccctgccccccctgctccccctgccccccctgctccccctgtg
tccccgcaggcaggtgacaatgacagcttggaaagtcagcttgcccaatctcggaagcag
gtagccaaaaagagcacatccttccgaccaggatctgtgggctctggtcattcctcccct
acatctcctgcactcagtgaaaatgttcctgctgggaaacctgggagcaaccagacatat
agatcacctttaggcccaacagcctctgccccagcagcacccccagcacctcccgtgccc
ccagccttccatggcatgttagaacgggccccagcggagccctcctaccgtgcccccatg
gagaagctcttctatttacctcatgtgtgcagctatacgtgtctgtctcgagttagacct
atgagaagtgcacagtaccggggcaagaacccactgctggtcccgctgctctatgacttc
cggcggatgacagcccgtcgccgagttaaccgcaagatgggatttcacgtgatctataag
acaccctgtggcctctgccttcggacaatgcaggagattgaacgctatctttttgagact
ggctgtgacttcctcttcctggagatgttctgtttggatccatatgttcttgtggaccgc
aagtttcagccctataaacctttttactacattctggacatcacctatgggaaggaagat
gtccccctatcctgtgtcaatgagattgacacaacccccccaccccaggtggcctatagt
aaggaacgaatccctggcaagggtgttttcattaacacaggcccagaatttctggtcggc
tgtgactgcaaggatgggtgccgtgacaagtccaagtgtgcctgtcatcagctaactatc
caggccacagcctgtaccccgggcggccagatcaaccctaattctggttaccagtacaag
agactagaagagtgtctgcccacaggagtttatgagtgtaacaaacgttgtaaatgtgac
ccaaacatgtgcacaaaccggttggtgcagcacggactccaggttcggctacagctattc
aagacacagaacaagggctggggtattcgctgcttggatgacattgccaaaggatccttc
gtctgtatttatgcaggcaagatcctgacagatgactttgcggacaaggagggcctggag
atgggtgatgagtactttgccaatctggaccatatcgagagtgtggagaacttcaaggaa
ggatatgagagtgatgccccctgttcgtccgacagcagcggggtggacttgaaggaccag
gaagatggcaacagcggtacagaggatcccgaagagtccaatgacgacagttccgatgat
aacttctgtaaagatgaggacttcagtaccagctctgtgtggcgcagctatgctacccgg
aggcagacccggggccaaaaggagaacggactgtctgagacggcttccaaggactcccgc
cccccagaccttgggcccccccatattcctgtccctccagcgatccctgggggtggctgc
aatccgccttcctctgaagagacacccaagaataaggtggcctcatggttgagctgcaat
agtgtcagtgaaggtggctttgctgactctgatagccgttcatccttcaagactagcgaa
ggtggggaaggccgggctgggggaggcagaggggaggctgagaaggcctccacctcaggg
ctgggcttcaaggatgagggagatctcaagcaggccaagaaagaggaccccgatgaccga
aacaagatgtccttaatcactgaaagctctcgaaattatggttacaatccttctcccatg
aaacttgaaggacttcgccgcccacctagtaagactagtatgcatcagagccgacgactc
atggcctctgctcagtctaacgctgatgatgtcttaacactgtccagcagcacagaaagc
gagggggaaagtgggaccagccggaagcctaccgccggccagacttcagccacagcagtg
gacagcgatgatatccagaccatctcctctggctctgaagcagatgactttgaggacaag
aagaacatgtctggtccaacaaagcgccaggtggcagtaaaatcaacccggggctttgct
cttaagtcaacccatgggattgccattaaatcaaccaacatggcatccgtggaaaagggg
gaaagcgcacctgtccgtaagaacacacgccagttctacgatggggaggagtcttgctac
atcattgacgccaagctcgaaggcaacctgggccgctacctcaatcacagctgcagcccc
aacctgtttgtccagaatgtctttgtggacactcacgatcttcgcttcccctgggtggcc
ttctttgccagcaagaggatccgggccgggaccgagctgacttgggactacaactatgag
gtgggcagcgtggaaggcaaggagctgctgtgctgctgcggggccattgaatgcaggggg
cggcttctttag
DBGET
integrated database retrieval system
