Lynx rufus (bobcat): 124520921
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Entry
124520921 CDS
T08475
Name
(RefSeq) short transient receptor potential channel 3 isoform X1
KO
K04966
transient receptor potential cation channel subfamily C member 3
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf04360
Axon guidance
lruf05017
Spinocerebellar ataxia
lruf05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09150 Organismal Systems
09158 Development and regeneration
04360 Axon guidance
124520921
09160 Human Diseases
09164 Neurodegenerative disease
05017 Spinocerebellar ataxia
124520921
05022 Pathways of neurodegeneration - multiple diseases
124520921
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
lruf04040
]
124520921
Ion channels [BR:
lruf04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
124520921
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TRP_2
Ion_trans
PKD_channel
Ank_2
Ank
Ank_4
Ank_5
PBC
Motif
Other DBs
NCBI-GeneID:
124520921
NCBI-ProteinID:
XP_046948002
LinkDB
All DBs
Position
Unknown
AA seq
925 aa
AA seq
DB search
MSTKVRKCKEQARVTFPAPEEEEEEEEEEGEDEGSEPQRRRRGWRGVNGGLEPRSAPSQR
EAHSYCPQRFSPGLDMSMEGSPSLRRKTVMREKGRRQAVRGPAFMFNDRGTSLTAEEERF
LDAAEYGNIPVVRKMLEESKTLNVNCVDYMGQNALQLAVGNEHLEVTELLLKKENLARIG
DALLLAISKGYVRIVEAILNHPGFAASKRLTLSPCEQELQDDDFYAYDEDGTRFSPDITP
IILAAHCQKYEVVHMLLMKGARIERPHDYFCKCGDCMEKQRHDSFSHSRSRINAYKGLAS
PAYLSLSSEDPVLTALELSNELAKLANIEKEFKNDYRKLSMQCKDFVVGVLDLCRDSEEV
EAILNGDLESAEPLEVHRHKASLSRVKLAIKYEVKKFVAHPNCQQQLLTIWYENLSGLRE
QTIAIKCLVVLVVALGLPFLAIGYWIAPCSRLGKILRSPFMKFVAHAASFIIFLGLLVFN
ASDRFEGITTLPNITVIDYPKQIFRVKTTQFTWTEMLIMVWVLGMMWSECKELWLEGPRE
YILQLWNVLDFGMLSIFIAAFTARFLAFLQATKAQQYVDSYVQESDLSEVTLPPEIQYFT
YARDKWLPSDPQIISEGLYAIAVVLSFSRIAYILPANESFGPLQISLGRTVKDIFKFMVL
FIMVFLAFMIGMFILYSYYLGAKVNAAFTTVEESFKTLFWSIFGLSEVTSVVLKYDHKFI
ENIGYVLYGIYNVTMVVVLLNMLIAMINSSYQEIEDDSDVEWKFARSKLWLSYFDDGKTL
PPPFSLVPSPKSFVYFVMRIINFSKCRRSRLQKDIEMGMGNSKSRLNLFTQSNSRVFESH
SFNSILNQPTRYQQIMKRLIKRYVLKAQVDKENDEVNEGELKEIKQDISSLRYELLEDKS
QATEELAVLIHKLSEKLNPSMLRCE
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgtccaccaaggtcaggaagtgcaaggagcaagcgagggtgaccttccccgcgccggag
gaggaggaagaggaggaggaggaggagggtgaggacgaaggctcggagccgcagcgccgc
cggcggggctggaggggcgtcaacggggggctggagccgcgctcggcgccctcacagcgg
gaagcgcacagctactgcccgcagcgcttctcccccgggctggacatgtccatggaggga
agcccatctctgaggcgcaagacagtgatgcgggagaagggccggcgccaggccgtccgg
ggccccgctttcatgttcaatgaccggggtaccagcctcacagctgaggaagagcgcttc
ctcgacgctgccgagtacggcaacatccccgtggtgcgcaagatgctagaggagtccaag
acgttgaacgtcaactgcgtggactacatgggccagaacgcgctgcagctggccgtgggc
aacgagcacctggaggtgacagagctgctgctcaagaaggaaaacctggcacgaatcggc
gacgccctgctgcttgccatcagcaagggctacgtgcgcatcgtggaagctatcctcaac
caccccggcttcgcagccagcaagcgcctgaccctgagcccctgtgagcaggagctgcag
gacgacgacttctatgcttacgacgaggacggcacacgcttctctcccgacatcacgccc
atcatcctggcggcgcactgccagaagtacgaggtggtgcatatgctactgatgaagggt
gccaggatcgagcggccacacgactatttttgcaagtgcggagattgcatggagaagcag
aggcacgactctttcagccactcacgctcgaggatcaatgcctacaaggggctggccagc
ccagcgtacctgtccttgtctagcgaggacccagtgctcaccgccttggagctcagcaat
gagttggccaagctggccaacatagagaaggagttcaagaatgactaccggaagctctcc
atgcaatgtaaagactttgtagtgggtgtgctggatctttgccgagactcagaagaggta
gaagccattctgaatggagatctggaatcagcagagcccctagaggtacacaggcataaa
gcttcactgagtcgtgtcaaacttgctattaagtatgaagtcaaaaagtttgtggctcac
cccaactgccagcagcagctcttgacaatctggtatgagaacctctcaggcctgcgggaa
cagaccatagctatcaagtgtctggttgtgctggtggtggccttgggccttccatttctt
gccatcggctactggattgcaccttgcagcaggctggggaaaattctgcgaagccctttc
atgaagtttgtggcacatgctgcttctttcatcatcttcctgggcctgctcgtgttcaat
gcctcagacaggttcgaaggcatcaccacgctgccaaacatcactgttattgactatccc
aagcagatcttcagggtgaaaaccacccagttcacttggactgagatgctaattatggtc
tgggttcttggaatgatgtggtctgagtgtaaggagctctggctggaaggacctagagaa
tatattttgcagttgtggaatgtgctggactttgggatgctttccatcttcattgctgct
ttcacagccagatttctagctttccttcaggcaacaaaagcacaacagtatgtggacagt
tatgtccaagagagtgacctcagtgaagttacacttccaccagagatacagtatttcact
tatgccagagataaatggctcccttctgaccctcagatcatatctgaaggcctctacgcc
attgctgttgtgctcagtttctctcggatcgcatatatcctccctgcaaatgagagcttt
ggccccttacagatctctcttggaaggactgtgaaggatatattcaagttcatggtcctc
tttattatggtgtttcttgcctttatgattggcatgttcatactttattcttactacctt
ggggctaaagtaaatgctgcttttaccactgtagaagaaagtttcaagacactgttttgg
tcaatatttgggttgtctgaagtcacttctgttgtgctcaaatacgatcacaaattcata
gagaatattggctacgttctgtatggaatatacaatgtaactatggtggtcgttttactc
aacatgttaattgctatgattaatagctcatatcaagaaattgaggatgacagtgacgta
gaatggaagtttgcccgttcaaaactttggttatcttattttgatgatggaaaaacatta
cctccacccttcagtctagttcctagtccaaagtcatttgtttatttcgtcatgaggatc
atcaacttctccaaatgcagaaggagccggctacagaaggatatagaaatgggaatgggt
aactccaagtccaggttaaacctcttcactcagtctaactcaagagtttttgaatcacac
agttttaacagcattctcaaccagccaacacgttatcagcagataatgaaaagacttata
aagcgatatgttctgaaagcacaagtggacaaggaaaatgatgaagttaatgaaggtgaa
ttaaaagaaatcaaacaagatatctccagccttcgttatgaacttttagaggacaagagc
caagcaactgaggaattagccgttctgattcataaactcagtgagaaactgaatcctagc
atgctgagatgtgaatga
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