Lynx rufus (bobcat): 124522156
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Entry
124522156 CDS
T08475
Name
(RefSeq) 116 kDa U5 small nuclear ribonucleoprotein component
KO
K12852
116 kDa U5 small nuclear ribonucleoprotein component
Organism
lruf
Lynx rufus (bobcat)
Pathway
lruf03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lruf00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
124522156
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lruf03041
]
124522156
Spliceosome [BR:
lruf03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
124522156
Complex C
U5 SnRNP specific factors
124522156
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
EFTUD2
EFG_C
EFG_IV
GTP_EFTU_D2
EFG_III
EFL1
EF-G_D2
Motif
Other DBs
NCBI-GeneID:
124522156
NCBI-ProteinID:
XP_046949370
LinkDB
All DBs
Position
Unknown
AA seq
972 aa
AA seq
DB search
MDTDLYDEFGNYIGPELDSDEDDDELGRETKDLDEMDDDDDDDDVGDHDEDHPGMEVVLH
EDKKYYPTAEEVYGPEVETIVQEEDTQPLTEPIIKPVKTKKFTLMEQTLPVTVYEMDFLA
DLMDNSELIRNVTLCGHLHHGKTCFVDCLIEQTHPEIRKRYDQDLCYTDILFTEQERGVG
IKSTPVTVVLPDTKGKSYLFNIMDTPGHVNFSDEVTAGLRISDGVVLFIDAAEGVMLNTE
RLIKHAVQERLAVTVCINKIDRLILELKLPPTDAYYKLRHIVDEVNGLISMYSTDENLIL
SPLLGNVCFSSSQYSICFTLGSFAKIYADTFGDINYQEFAKRLWGDIYFNPKTRKFTKKA
PTSSSQRSFVEFILEPLYKILAQVVGDVDTSLPRTLDELGIHLTKEELKLNIRPLLRLVC
KKFFGEFTGFVDMCVQHIPSPKVGAKPKIEHTYTGGVDSDLGEAMSDCDPDGPLMCHTTK
MYSTDDGVQFHAFGRVLSGTIHAGQPVKVLGENYTLEDEEDSQICTVGRLWISVARYHIE
VNRVPAGNWVLIEGVDQPIVKTATITEPRGNEEAQIFRPLKFNTTSVIKIAVEPVNPSEL
PKMLDGLRKVNKSYPSLTTKVEESGEHVILGTGELYLDCVMHDLRKMYSEIDIKVADPVV
TFCETVVETSSLKCFAETPNKKNKITMIAEPLEKGLAEDIENEVVQITWNRKKLGEFFQT
KYDWDLLAARSIWAFGPDATGPNILVDDTLPSEVDKALLGSVKDSIVQGFQWGTREGPLC
DELIRNVKFKILDAVVAQEPLHRGGGQIIPTARRVVYSAFLMATPRLMEPYYFVEVQAPA
DCVSAVYTVLARRRGHVTQDAPIPGSPLYTIKAFIPAIDSFGFETDLRTHTQGQAFSLSV
FHHWQIVPGDPLDKSIVIRPLEPQPAPHLAREFMIKTRRRKGLSEDVSISKFFDDPMLLE
LAKQDVVLNYPM
NT seq
2919 nt
NT seq
+upstream
nt +downstream
nt
atggataccgacttatatgacgagtttggaaattatattggaccagagcttgattctgat
gaagatgatgatgaactgggcagagagaccaaagatcttgatgagatggatgatgacgac
gatgacgatgacgtaggagatcacgatgaggaccaccctgggatggaggtggtgctgcac
gaggacaagaagtactaccccacagctgaggaggtgtacggtcctgaggtggagaccatc
gtacaagaggaagacacccagcctctcaccgaacctataattaagccggtgaaaaccaag
aagttcactctgatggagcagactttacctgtcacggtgtatgaaatggacttcttggca
gatttgatggataactcggagctcatcagaaatgtgaccctctgtggccatctccaccat
ggcaagacatgttttgtagattgtttaatagagcagactcacccggaaatcaggaagcgc
tatgaccaagatctgtgctacactgacatcctcttcacagagcaggagagaggtgttggc
atcaaaagcactccagtgacagtggtcttgccagataccaaaggaaagtcttacctcttc
aatatcatggacactccaggacatgtgaatttttctgatgaggtcacagctggcttgcgt
atctcagatggagttgtccttttcatcgatgcggctgaaggggtgatgctaaacacagag
cggctgatcaagcacgcagtacaggagaggctggcggtcaccgtgtgcatcaacaagatt
gaccggctgatcctggagctaaagctgcctccaactgatgcttattataagctgcgccac
atcgtagatgaggtcaacggattaataagcatgtactccaccgatgagaacctgatcctt
tccccactcctgggcaacgtctgcttctccagctcccagtacagcatctgcttcacactc
ggctcctttgccaagatctatgctgacaccttcggtgacattaactaccaggaatttgct
aaaagactctggggtgacatctacttcaaccccaaaacacgaaaattcacaaaaaaggcc
ccaaccagcagctcccagaggagctttgtggagtttatcttggagcctctgtataagatc
cttgctcaggttgtgggtgacgtggacaccagcctccccaggaccctggatgagcttggc
attcatctgaccaaagaagagcttaagctgaatatccgccccctgctcaggctggtctgc
aaaaaattctttggtgaattcacaggctttgtggacatgtgtgtgcagcatatcccctct
ccaaaggtgggcgccaagcccaagattgagcacacctacactggcggtgtggattctgat
ctcggcgaggccatgagcgactgtgatcctgacggtcccctgatgtgccacaccaccaag
atgtacagcacggatgatggagttcagtttcatgcctttggccgggtgctgagtggcacc
atccatgctgggcagcccgtgaaggtgctgggggagaactacaccctggaggatgaggaa
gactcccagatatgcaccgtgggtcgtctttggatctctgtggccagataccacattgag
gtgaaccgtgttcctgctggcaactgggttctgatcgaaggtgttgatcaaccaattgtg
aagacagcaaccataactgaaccccgaggcaatgaggaggctcagattttccgccccttg
aagttcaacaccacatccgttatcaagattgctgtggaaccagtcaacccctcagagcta
cccaagatgctggacggtctgcgcaaggtcaacaagagctatccatccctcaccaccaag
gtggaagagtctggagagcacgtgattctgggtactggggagctgtacctcgactgtgtg
atgcacgatttacggaagatgtactcagagatcgacatcaaggtggctgatcccgttgtc
acgttttgtgagacggtggtggagacatcttccctcaagtgctttgctgaaacgcccaat
aagaagaataagatcaccatgattgctgagcctctcgagaagggcctcgccgaggacata
gagaatgaggtggtccagatcacgtggaacaggaagaaactgggagaattcttccagacc
aagtacgattgggatctgctggctgcccgttctatctgggcttttggccctgatgccacc
ggccccaacatcctggtggatgataccctgccttctgaggtggacaaggctcttcttggc
tcagtgaaggacagcattgttcaaggtttccagtggggaaccagggaggggcccctctgt
gacgagttgattcgaaatgtcaagtttaagatcctggatgcagtggttgcccaagagccc
ttgcaccggggcgggggccaaatcatccccacggccaggagagttgtctattctgccttc
ctcatggccactcctcgtctgatggagccttactacttcgtggaggtccaggcccctgca
gattgtgtctctgctgtgtatactgtcctggccaggcgcagggggcatgtgactcaggat
gcacccatcccaggctcccctctctacaccatcaaagctttcatccccgccattgactct
tttggctttgagaccgatctgcggactcacacccaggggcaggccttttccttgtctgtc
ttccaccattggcagattgtgcccggtgatcctctggacaagagcattgtcatccgtccc
ctggagccacaaccagctcctcacctggcccgagaattcatgatcaaaacccgtcgcagg
aagggactgagtgaggatgtgagcatcagcaagttctttgatgatcccatgttgctggag
ctcgccaagcaggatgttgtgctcaattaccccatgtga
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